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Transition State Theory

Date post: 18-Nov-2014
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These slides were for a 10 minute talk during my MSc in Modern Applications of Mathematics on Transition State Theory.
16
Horacio González Duhart [email protected]
Transcript
Page 1: Transition State Theory

Horacio González Duhart [email protected]

Page 2: Transition State Theory

What is TST?

E. Weinan and E. Vanden-Eijnden. Metastability, conformation dynamics, and transition ways in complex systems. 2004

“Transition State Theory is the oldest attempt to describe metastability in ergodic systems.”

Page 3: Transition State Theory

“Transition State Theory is the oldest attempt to describe metastability in ergodic systems.”

Acceleration

Mass

Position

Momentum

Potential energy

Page 4: Transition State Theory

“Transition State Theory is the oldest attempt to describe metastability in ergodic systems.”

C

TST simplification:

Page 5: Transition State Theory

Example of metastable sets in the context of TST:

Page 6: Transition State Theory

Example of metastable sets in the context of TST:

Page 7: Transition State Theory

Example of metastable sets in the context of TST:

Page 8: Transition State Theory

Ergodic theorem

“Transition State Theory is the oldest attempt to describe metastability in ergodic systems.”

IF

Then

Just think of Jack… he is not always wearing shoes, nor he is not always without them… he continuously keeps changing from one state to the other.

q

Page 9: Transition State Theory

“Rate of reaction is the rate of change in the concentration of one of the reactants or products”

“Transition State Theory is the oldest attempt to describe metastability in ergodic systems.”

N. E. Henriksen and F. Y. Hansen. Theories of Molecular Reaction Dynamics. 2008

Page 10: Transition State Theory

Ergodicity

Page 11: Transition State Theory

Ergodicity

Metastable

Page 12: Transition State Theory

Ergodicity

Metastable

Assuming Gibbs distribution

Page 13: Transition State Theory

Ergodicity

Metastable

Assuming Gibbs distribution

Page 14: Transition State Theory

Original papers from 1935, 1938. Several issues have been addressed, and current research involves techniques on: 1. Dividing surfaces

2. Transition path sampling, reactive trajectories

3. Finite String and MCMC methods

“Transition State Theory is the oldest attempt to describe metastability in ergodic systems.”

C

q

Page 15: Transition State Theory

No Jack was hurt during the making of this presentation.

Page 16: Transition State Theory

Horacio González Duhart [email protected]


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