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Unit 5, Topic 7 NOTES

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Bi ol ogy Notes – To pic 7 Kat he rine Bu rk e Biology Unit 5 Joints and Movement Muscles bring about movement at a joint, at least two are needed to move a bone to and fro because muscles can only pull. A pair of muscles working in this way are described as antagonistic. A muscle that causes contraction is called an extensor while the flexor muscle contracts in the reverse movement.  JOINT STRUCTURE   This is an example of a synovial joint, such as those of the kip, knee and ankle. The bones that articulate in the joint are separated by a cavity filled with synovial fluid, which enables them to move freely. Muscles HOW MUSCLES WORK     C    h   a   p    t   e   r   :    J   o    i   n    t   s   a   n    d    M   o   v   e   m   e   n    t 1 Other types of joints Ball-and-socket joint  A round head fit into a cup-shaped socket, e.g. the hip Gliding joint Two flat surfaces slide over one another, e.g. the articulating surfaces between neighbouring vertebrae Hinge joint  A convex surface fits into a concave surface, e.g. the elbow Pivot joint Part of one bone fits into a ring-shaped structure and allows rotation e.g. the joint at the top of the spine The plates of the skull are fixed together by  fibrous tissue so very little movement occurs, protecting the brain. In the skull of a newborn baby the joints are not yet fixed, allowing the plates to move and the skill deform (reversibly) during birth. There are spaces between the skull bones, which fill in as the plates grow and  fuse together. Pelvic bones are joined together by cartilage, so slight movement is possible during childbirth. This is a cartilaginous joint. There are also saddle joints in which more complex concave and convex surfaces articulate.
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8/2/2019 Unit 5, Topic 7 NOTES

http://slidepdf.com/reader/full/unit-5-topic-7-notes 1/10

Biology Notes – Topic 7 Katherine Burke

Biology Unit 5

Joints and Movement

Muscles bring about movement at a joint, at least two are needed to move a boneto and fro because muscles can only pull. A pair of muscles working in this way

are described as antagonistic. A muscle that causes contraction is called an

extensor while the flexor muscle contracts in the reverse movement.

 JOINT STRUCTURE 

 This is an example of a

synovial joint, such as

those of the kip, knee andankle. The bones that

articulate in the joint are

separated by a cavity

filled with synovial fluid,

which enables them to

move freely.

MusclesHOW MUSCLES WORK  

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Other types of jointsBall-and-socket joint A round head fit into a cup-shaped socket, e.g. the hip

Gliding jointTwo flat surfaces slide over one another, e.g. the articulating surfaces betweenneighbouring vertebrae

Hinge joint A convex surface fits into a concave surface, e.g. the elbow 

Pivot jointPart of one bone fits into a ring-shaped structure and allows rotation e.g. the joint atthe top of the spine

The plates of the skull are fixed together by  fibrous tissue so very little movementoccurs, protecting the brain. In the skull of a newborn baby the joints are not yet fixed,allowing the plates to move and the skill deform (reversibly) during birth. There arespaces between the skull bones, which fill in as the plates grow and  fuse together.

Pelvic bones are joined together by cartilage, so slight movement is possible duringchildbirth. This is a cartilaginous joint. There are also saddle joints in which morecomplex concave and convex surfaces articulate.

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Biology Notes – Topic 7 Katherine Burke

Muscle is made up of bundles of muscle fibres. Each fibre is a single muscle cell.

Each cell has several nuclei, referred to as multinucleate. This is because one

nucleus does not effectively control the metabolism of such a long cell. During

prenatal development, several cells fuse together to form the length of muscle

fibres. The muscle cells are stripped which is important for them to be able to

contract.

Tendon

 Tendons at each end of the muscle connect the muscle to bone.

Bundle of Muscle Fibres

 The muscle is made up of bundles of muscle fibres up to 2cm across. These are

bound together by connective tissue, which is continuous with the tendons.

Muscle Fibre

Each muscle fibre is a single muscle cell surrounded by a cell surface membrane.

Each muscle fibre may be several centimetres long, but is less than 0.1mm in

diameter. Inside the muscle fibre is the cytoplasm containing mitochondria and

other organelles.

Myofibrils

Within each muscle fibre there are numerous myofibrils; each is composed of 

repeated contractile units called sarcomeres.

INSIDE MUSCLE  FIBRES 

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3. The banding patterns created on an extendedmuscle myofibril

Biology Notes – Topic 7 Katherine Burke

Inside each muscle fibre are numerous myofibrils which are made of a series of 

contractile units called sarcomeres.

Sarcomeres are made of types of protein molecules called actin and myosin.

Actin normally makes up the thin filaments whereas myosin is mainly for

thicker filaments. Contractions are produced by co-ordinating the sliding of thefilaments in the sarcomeres. The proteins overlap and give the muscles fibres the

striated characteristic.

Where actin filaments occur on their own, there is a light band on the

sarcomeres. Where both actin filaments and myosin filaments occur, there is a

dark band. Where only myosin filaments occur, there is an intermediate

coloured band.

HOW 

SARCOMERES 

SHORTEN 

Actin is associated with the proteins troponin and tropomyosin. The club shafts

of myosin lie together as a bundle, with heads protruding along their length. In

contraction, the change in orientation of the myosin heads brings about themovement of actin. The myosin heads attach to the actin and dip forward, sliding

actin over the myosin; this is the sliding filament theory.

THE SLIDING FILAMENT THEORY  

When a nerve impulse arrives at a neuromuscular junction, calcium ions are

released from the sarcoplasmic reticulum. This is a specialised type of 

endoplasmic reticulum: a system of membrane-bound sacs around the myofibrils.

 The calcium ions diffuse through the sarcoplasm. This initiates the movement

of protein filaments.

1. Ca2+ attaches to the troponin molecule, causing it to move

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1. Actin and myosin filaments when the2. Actin and myosin filaments when the muscle

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Biology Notes – Topic 7 Katherine Burke

2. As a result, the tropomyosin on the actin filament shifts its position,

exposing myosin binding sites on the actin filaments

3. Myosin heads bind with myosin binding sites on the actin filament, forming

cross-bridges

4. When the myosin head binds to the actin, ADP and Pi on the myosin head

are released

5. The myosin changes shape, causing the myosin head to nod forward.

 This movement results in the relative movement of the filaments; the

attached actin moves over the myosin

6. An ATP molecule binds to the myosin head. This causes the myosin head to

detach

7. An ATPase on the myosin head hydrolyses the ATP, forming ADP and Pi

8. This hydrolysis causes a change in the shape of the myosin head. It returns

to its upright position. This enables the cycle to start again

When a muscle relaxes, it is no longer being stimulated by nerve impulses.

Calcium ions are actively pumped out of the muscle sarcoplasm, using ATP. The

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Biology Notes – Topic 7 Katherine Burke

troponin and tropomyosin move back, once again blocking the myosin binding

sites on the actin. In the absence of ATP, the cross-bridges remain attached. This

is what happens in rigor mortis when the muscles that are contracted become

rigid.

Energy for Action The minimum energy requirement is called the basal metabolic rate (BMR),

measured in kJ g-1 h-1. It is used to measure the minimum energy requirement of 

the body at rest to fuel basic metabolic processes. BMR is measured by recording

oxygen consumption under strict conditions of no food consumption for 12

hours before measurement; the body had to be totally at rest in a

thermostatically controlled room. BMR is roughly proportional to the body’s

surface area. It varies between individuals depending on their age and gender.

Percentage body fat seems to be important in accounting for these differences.

Physical activity increases the body’s total daily energy expenditure. Energy is

needed for muscle contraction to move the body but the energy can vary on how

the muscles are used. For example, an elite marathon runner uses energy at

almost half the rate of a sprinter.

Releasing energy 

Food is the source of energy for all animal activity. The main energy sources are

carbohydrates and fats that have been absorbed or stored around the body.

Respiration is linked to ATP synthesis as the cells use the molecule ATP as an

energy carrier molecule.

ATP is created from ADP by the addition of Pi. In solution, phosphate ions are

hydrated and so the phosphate needs to be separated from these water

molecules to make ATP, requiring energy. ATP in water is higher in energy thanADP and phosphate ions in water, so ATP is water is a way of storing chemical

Other types of muscleMuscles found in the gut wall, blood vessels and the iris of the eye are known as smoothmuscle as their fibres do not appear to be striped. These are small cells with a single nucleus. They have a similar mechanism of contraction to skeletal muscle, using myosinand actin protein filaments. However, they are not arranged in the same way as they have gap junctions. These intercellular channels less than 2nm in diameter, and arebetween the smooth muscle cells to give cytoplasmic continuity between the cells. Thisallows chemical and electrical signals to pass between adjacent cells, and so allowssynchronised contraction. Contractions in smooth muscle fibres are slower and longer lasting and the fibres fatigue very slowly if at all.

The heart walls are made of specialised muscle fibres called cardiac muscle. These arestriped and interconnected to ensure that a co-ordinated wave of contraction occurs inthe heart. Cardiac muscle fibres do not fatigue. Neither smooth nor cardiac muscles areunder conscious control.

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Biology Notes – Topic 7 Katherine Burke

potential energy. ATP keeps the phosphate separated from the water, but they

can be brought together in an energy-yielding reaction every time energy is

needed for reactions within the cell.

When one phosphate group is removed from ATP by hydrolysis, ADP forms. A

small amount of energy is required to break the bond holding the end phosphatein the ATP. Once removed, the phosphate group becomes hydrated. A lot of 

energy is released as bonds form between water and phosphate. This energy can

be used to supply energy-requiring reactions in the cell. Some of the energy

transferred during hydration of phosphate from ATP will raise the temperature

of the cell; some is available to drive other metabolic reactions such as muscle

contraction, protein synthesis or active transport. The hydrolysis of ATP is coupled

to these other reactions:

Carbohydrate oxidation

If exercise is low intensity, enough oxygen is supplied to cells to enable ATP to be

regenerated through aerobic respiration of fuels. Fates and carbohydrates are

oxidised to carbon dioxide and water. A summary of the equation for aerobic

respiration:

Photosynthesis was described as a process that separates hydrogen from oxygen

by photolysis. The hydrogen from water is stored by combining it was carbon

dioxide to form carbohydrate. In aerobic respiration, the hydrogen stored in

glucose is brought together with oxygen to form water again. The bonds between

hydrogen and carbon atoms in glucose are not as strong as the bonds between

hydrogen and oxygen atoms in water. Therefore, the input of energy needed to

break the bonds in glucose and oxygen is not as great as the energy released

when the bonds in carbon dioxide and water are formed. Overall, there is a

release of energy and this can be used to generate ATP.

Glucose and oxygen are not brought together directly, as this would release large

amounts of energy too quickly and therefore damage the cell. Glucose is split

apart in a series of small steps with carbon dioxide as the waste product.Hydrogen from the glucose is eventually reunited with oxygen to release large

amounts of energy as water is formed.

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Biology Notes – Topic 7 Katherine Burke

GLYCOLYSIS FIRST 

 The initial stage of carbohydrate

breakdown, known as glycolysis, occurs in

the cytoplasm of cells and the sarcoplasm

of muscle cells.

Stores of glycogen in muscle or liver cellsmust first be converted to glucose. It is a

good fuel but it is quite stable and

unreactive. Therefore, the first reactions of 

glycolysis need an input of energy from ATP

to get started. Two phosphate groups are

added to the glucose from two ATP

molecules increasing the reactivity of 

glucose. It can then be split into two 3-

carbon molecules.

Each intermediate 3C sugar is oxidised to produce pyruvate, a 3C compound.

 Two hydrogen atoms are removed during the reaction and taken up by the

coenzyme NAD, which is a non-protein organic molecule. Glucose is at a higher

energy level than the pyruvate and so some energy becomes available for the

direct creation of ATP. Phosphate from the intermediate compounds is transferred

to ADP to create ATP, known as the substrate-level phosphorylation.

In summary, glycolysis reactions yield a net gain of two ATPs, two pair of 

hydrogen atoms, and two molecules of 3C pyruvate.

THE FATE OF PYRUVATE IF OXYGEN IS AVAILABLE 

If oxygen is available, the pyruvate created passes into the mitochondria where

it is completely oxidised to form carbon dioxide and water.

 THE LINK  REACTION 

In the first step, pyruvate is decarboxylated, when carbon

dioxide is released as a waste product, and

dehydrogenated, where two hydrogens are removed and

taken up by the coenzyme NAD. The resulting 2C molecule

combines with coenzyme A to form acetyl coenzyme A

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Biology Notes – Topic 7 Katherine Burke

(acetyl CoA). Two hydrogen atoms released are involved in ATP formation. The

coenzyme A carries the 2C acetyl groups to the Krebs cycle.

 

UNDERSTANDING THE CHEMISTRY  OF RESPIRATION

 The chemical reactions inside cells are controlled by enzymes. There are four

important types of reaction in the Krebs cycle:

• Phosphorylation reactions

• Decarboxylation reactions

• Redox reactions

K REBS CYCLE 

Each 2-carbon acetyl CoA combines with a 4-carbon compound to create 6

carbons. Two steps are decarboxylation with the formation of carbon dioxide.

Four steps are dehydrogenation, which removes pairs of hydrogen atoms. One

of the steps includes substrate-level phosphorylation with direct synthesis of a

single ATP molecule. The Krebs cycle takes place in the mitochondrial matrix

where the enzymes that catalyse the reactions are located.

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Biology Notes – Topic 7 Katherine Burke

Each 2-carbon molecule entering the Krebs cycle results in the production of two

carbon dioxide molecules, one molecule of ATP by substrate-level

phosphorylation, and four pairs of hydrogen atoms, which are taken up by the

hydrogen acceptors, the coenzymes NAD and FAD. The hydrogen atoms are

subsequently involved in ATP production via the electron transport chain.

The Electron Transport Chain

For most hydrogen produced, the coenzyme NAD is the hydrogen acceptor but

those released in one-step of the Krebs cycle are accepted by the coenzyme FAD

rather than NAD.

When a coenzyme accepts hydrogen with its electron, the coenzyme is reduced,

becoming reduced NAD or reduced FAD. This reduced coenzyme ‘shuttles’ the

hydrogen atoms to the electron transport chain on the mitochondrial inner

membrane. Each hydrogen atom’s electron and proton then separate, with the

electron passing along a chain of electron carriers in the inner mitochondrial

membrane.

ATP S YNTHESIS BY CHEMIOSMOSIS 

Energy is released as electrons pass along the electron transport chain. This

energy is used to move hydrogen ions from the matrix, across the inner

mitochondrial membrane, and into the intermembrane space. This creates a

steep electrochemical gradient across the inner membrane. There is a large

difference in the concentration of hydrogen ions across the membrane, and a

large electrical difference, making the intermembrane space more positive thanthe matrix.

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Biology Notes – Topic 7 Katherine Burke

 The hydrogen ions diffuse down this electrochemical gradient through hollow

protein channels in stalked particles on the membrane. As the hydrogen ions pass

through the channel, ATP synthesis is catalysed by ATPase located in each

stalked particle. The hydrogen ions cause a conformational change in the

enzyme’s active site, so the ADP can bind.

Within the matrix, the hydrogen ions and electrons recombine to form hydrogen

atoms. These combine with oxygen to form water. The oxygen, acting as the final

carrier in the electron transport chain, is thus reduced. This method of ATP

synthesis is known as oxidative phosphorylation.

HOW MUCH ATP IS PRODUCED?

 The total number of ATP produced by one glucose molecule can vary according to

the efficiency of the cell. A simple explanation would give a maximum number of 

38 ATP molecules per glucose molecule. This is based on the assumption that

that reduced NAD that is reoxidised results in the formation of three ATPmolecules and each reduced FAD results in production of two ATP molecules.

RATE OF RESPIRATION 

 The rate of aerobic respiration can conveniently be determined by measuring the

uptake of oxygen using a respirometer. The rate is determined by the any factor

affecting the rate of the enzyme-controlled reactions.

 The concentration of ATP in the cell has a role in the control of respiration. ATPinhibits the enzyme in the first step of glycolysis, the phosphorylation of glucose.

 The enzyme responsible for glucose phosphorylation can exist in two different

forms. As the ATP is broken down, the enzyme is converted back to the active form

and catalysis the phosphorylation of glucose. This is known as end point inhibition.

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