Codata Workshop 1

VViNCES – Weblabs on iNCES – Weblabs on ecosystem servicesecosystem services

Pedro Luiz Pizzigatti CorrêaUniversidade de São Paulo - BrazilAgricultural Automation Laboratory

Workshop CODATAAtibaia – SP Brazil

May 9

Codata Workshop 2

Summary

Introduction

ViNCES

Weblabs: photosynthesis and pollinators

System Architecture

Future works

Codata Workshop 3

Consortium of three research groups :

Collaboration of University of California, S. Diego – USA.

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 4

Organized in Weblabs of Environmental Services:

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 5

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Objectives:Research● Allow remote access to field or lab experiments● Facilitate collaboration between researchers● Use an Advanced Internet for real-time video

streaming: High Definition video

Education / training / decision making● Make available materials on biology/ keeping of bees● Reach wider audience:

Geographically distributed audiencedifferent profiles

● “commodity” Internet – Small Definition videos

Codata Workshop 7

Open top chamber weblabOpen top chamber weblab

Open Top Chambers (OTC)● Research tools to evaluate the

effect of trace gases on vegetation● Experiments with normal and

enriched CO2 atmosphere Plant responses Plant potential as carbon sinks Kyoto Protocol

CO2 reservoir

Codata Workshop 8

Monitoring System

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 9

Real time video and sound captured on the beehive

BBB: Real Time Video StreamingBBB: Real Time Video Streaming

Codata Workshop 10

Audio monitoring and analysisAudio monitoring and analysis

Audio acquisition inside a colony● Studies on audio inside a colony (communication)● x other conditions (weather, food availability, threats).● Patterns, spectra, level

Partnership with James C. Nieh

University of California, S. Diego

Codata Workshop 11

Portal-Provider Weblabs Architecture

Three components : Experiment, Weblab and Portal.

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 12

System Architecture

Integration of Welabs and Portal (SOA paradigm)

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 13

Architecture Components

Species Specimens

subject data

video audio

behavioural data

Responsible Description

cadastral data

Temperature Humidity

environmental data

experiment data

Species Specimens

subject data

video audio

behavioural data

Responsible Description

cadastral data

Temperature Humidity

environmental data

experiment data

Data Experiment Model

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 14

Architecture Components

experiment dataexperiment data

experiment data

WMIB ACL

weblab data

weblab services

wmib_get : read data from deviceswmib_set : set up a weblab deviceannounce : shows weblabs capabilitiesretrieve : retrive weblabs experimentsrecord : record experiment data

weblab model

experiment dataexperiment data

experiment data

WMIB ACL

weblab data

weblab services

wmib_get : read data from deviceswmib_set : set up a weblab deviceannounce : shows weblabs capabilitiesretrieve : retrive weblabs experimentsrecord : record experiment data

weblab model

Data Weblab Model

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 15

Architecture Components

Weblab MIB (WMIB) extract

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 16

Architecture Components

Portal Model

experiment dataexperiment dataweblabs

PORTAL DATA

portal model

experiment dataexperiment dataweblabs

PORTAL DATA

portal model

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 17

Architecture Components

Weblab model considering security requirements

Coordinator

Authorization WEBLAB

Local ACL

Authentication

Local AuthenticationDatabase

Log Database

CoordinatorPortalLogger

Coordinator

Authorization WEBLAB

Local ACL

Authentication

Local AuthenticationDatabase

Log Database

CoordinatorPortalLogger

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 18

Future Works

Apply a metadata standard to manage portal/provider Weblab interactions (EML – Ecological Metadata Language);

Apply the consolidate architecture to the Weblab on photosynthesis and CO2 assimilation Laboratory.

Virtual network center of ecosystem services

Virtual network center of ecosystem services

Codata Workshop 19

Next steps● Video databases: increase number of species/behaviors● Real time video

Higher resolution videoComplete connection to TIDIA network (Gbps)Long term experimentsWeb control over recording

Final commentsFinal comments

Codata Workshop 20

Thank you!Thank you!

http://www.ib.usp.br/vinces

Acknowledgements: FAPESP for the financial supportAcknowledgements: FAPESP for the financial support