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V7: cell cycle

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V7: cell cycle. The cell cycle, or cell-division cycle, is the series of events that takes place in a cell leading to its division and duplication (replication). In cells without a nucleus (prokaryotes), the cell cycle occurs via a process termed binary fission. - PowerPoint PPT Presentation
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1 V7: cell cycle Cellular Programs WS 2010 – lecture 7 www.wikipedia.o rg The cell cycle, or cell- division cycle, is the series of events that takes place in a cell leading to its division and duplication (replication). In cells without a nucleus (prokaryotes), the cell cycle occurs via a process termed binary fission. Each turn of the cell cycle divides the chromosomes in a cell nucleus. In cells with a nucleus (eukaryotes), the cell cycle can be divided in 2 brief periods: interphase—during which the cell grows, accumulating nutrients needed for mitosis and duplicating its DNA—and the mitosis (M) phase, during which the cell splits itself into two distinct cells, often called "daughter cells".
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Page 1: V7: cell cycle

1

V7: cell cycle

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

The cell cycle, or cell-division cycle, is the

series of events that takes place in a cell

leading to its division and duplication

(replication).

In cells without a nucleus (prokaryotes),

the cell cycle occurs via a process termed

binary fission.

Each turn of the cell cycle divides the chromosomes in a cell nucleus.

In cells with a nucleus

(eukaryotes), the cell cycle can

be divided in 2 brief periods:

interphase—during which the

cell grows, accumulating

nutrients needed for mitosis and

duplicating its DNA—and

the mitosis (M) phase, during

which the cell splits itself into two

distinct cells, often called

"daughter cells".

Page 2: V7: cell cycle

2

Phases

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

The cell cycle consists of 4 distinct phases:

- G1 phase,

- S phase (synthesis),

- G2 phase (collectively known as interphase)

- and M phase (mitosis).

Activation of each phase is dependent on the

proper progression and completion of the

previous one.

Cells that have temporarily or reversibly stopped

dividing are said to have entered a state of

quiescence called G0 phase.

Schematic of the cell cycle.

Outer ring:

I = Interphase, M = Mitosis;

Inner ring:

M = Mitosis, G1 = Gap 1, G2 =

Gap 2, S = Synthesis.

Page 3: V7: cell cycle

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Activity during 4 phases

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

M phase itself is composed of 2 tightly coupled processes:

- mitosis, in which the cell's chromosomes are divided between the two daughter

cells, and

- cytokinesis, in which the cell's cytoplasm divides in half forming distinct cells.

Page 4: V7: cell cycle

4

Regulation of the eukaryotic cell cycle

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

Regulation of the cell cycle involves

processes crucial to the survival of a

cell, including the detection and repair

of genetic damage as well as the

prevention of uncontrolled cell

division.

The molecular events that control the

cell cycle are ordered and directional;

that is, each process occurs in a

sequential fashion.

It is impossible to "reverse" the cycle.

Leland Hartwell Tim Hunt Paul Nurse

Noble Price in Physiology/Medicine 2001

„for their discoveries of key regulators of

the cell cycle“

Two key classes of regulatory molecules,

cyclins and cyclin-dependent kinases

(CDKs), determine a cell's progress

through the cell cycle.

Page 5: V7: cell cycle

5

protein kinase A

Cellular ProgramsWS 2010 – lecture 7Masterson et al. Nat Chem Biol. 6, 825 (2010)

Taylor et al. Phil Trans R.Soc. B (1993)

Susan S. Taylor

UC San Diego

Page 6: V7: cell cycle

6

Cyclin – cdk2 complex crystal structure

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

Cyclin A – cdk 2

complex

red: PSTAIRE motif

yellow: activation loop

Nikola Pavletich

Memorial Sloan-Kettering

Cancer Center

Cyclin A – cdk2 phosphorylated

at Thr160

Page 7: V7: cell cycle

7

Crystal structure

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

p27(Kip1)-CyclinA-Cdk2 Complex

p27 (Kip1) is shown bound to the

CyclinA-Cdk2 complex, provoking

profound changes in the kinase

active site and rendering it inactive.

p27 also interacts with the secondary

substrate recognition site on the

cyclin.

Page 8: V7: cell cycle

8

Targets of Cdk1 (also known as Cdc28)

Cellular ProgramsWS 2010 – lecture 7

Enserink and Kolodner Cell

Division 2010 5:11

Sofar, 75 targets of Cdk1are known.

Cdk1 is involved in positive and negative feedback loops that regulate transcriptional programs to control cell cycle progression;Clb, Cln: cyclins

Page 9: V7: cell cycle

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Cdk1-phosphorylation sites

Cellular ProgramsWS 2010 – lecture 7

Enserink and Kolodner

Cell Division 2010 5:11

Cdk1 substrates frequently contain multiple phosphorylation sites that are clustered in regions

of intrinsic disorder, and their exact position in the protein is often poorly conserved in

evolution, indicating that precise positioning of phosphorylation is not required for regulation of

the substrate.

Cdk1 interacts with nine different cyclins throughout the cell cycle.

Expression of human cyclins through the cell cycle.

www.wikipedia.org

Page 10: V7: cell cycle

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Cdk1 modulates the activity of several DNA damage checkpoint proteins

Cellular ProgramsWS 2010 – lecture 7

Enserink and Kolodner Cell

Division 2010 5:11

Page 11: V7: cell cycle

11

Cd1-controlled targets and processes

Cellular ProgramsWS 2010 – lecture 7

Enserink and Kolodner

Cell Division 2010 5:11

Abstract

The cyclin dependent kinase Cdk1 controls the cell cycle, which is best understood in the

model organism S. cerevisiae. Research performed during the past decade has significantly

improved our understanding of the molecular machinery of the cell cycle. Approximately 75

targets of Cdk1 have been identified that control critical cell cycle events, such as DNA

replication and segregation, transcriptional programs and cell morphogenesis.

....

Conclusions

In conclusion, the identification of Cdk1 targets during the past decade has greatly improved

our understanding of the molecular mechanism of the cell cycle. Nonetheless, much work still

needs to be done because many targets remain to be identified, the exact phosphorylation

sites of many known Cdk1 targets have not been mapped and the consequences of these

phosphorylations at the molecular often remain elusive.

Page 12: V7: cell cycle

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Cell cycle checkpoints

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

Cell cycle checkpoints are control mechanisms that ensure the fidelity of cell

division in eukaryotic cells.

These checkpoints verify whether the processes at each phase of the cell cycle

have been accurately completed before progression into the next phase.

An important function of many checkpoints is to assess DNA damage, which is

detected by sensor mechanisms.

When damage is found, the checkpoint uses a signal mechanism either to stall the

cell cycle until repairs are made or, if repairs cannot be made, to target the cell for

destruction via apoptosis (effector mechanism).

All the checkpoints that assess DNA damage appear to utilize the same sensor-

signal-effector mechanism.

Page 13: V7: cell cycle

13

G1 checkpoint

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

The first checkpoint is located at the end of the cell cycle's G1 phase, just before

entry into S phase, making the key decision of whether the cell should divide, delay

division, or enter a resting stage.

Many cells stop at this stage and enter a resting state called G0.

Liver cells, for example, enter mitosis only around once or twice a year.

The G1 checkpoint is where eukaryotes typically arrest the cell cycle if

environmental conditions make cell division impossible or if the cell passes into G0

for an extended period.

In animal cells, the G1 phase checkpoint is called the restriction point, and in yeast

cells it is called the Start point.

Page 14: V7: cell cycle

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G2 checkpoint

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

The second checkpoint is located at the end of G2 phase, triggering the start of the

M phase (mitosis). In order for this checkpoint to be passed, the cell has to check a

number of factors to ensure the cell is ready for mitosis.

If this checkpoint is passed, the cell initiates many molecular processes that signal

the beginning of mitosis. The CDKs associated with this checkpoint are activated by

phosphorylation of the CDK by the action of a "Maturation promoting factor" (or

Mitosis Promoting Factor, MPF).

The molecular nature of this checkpoint involves the activating phosphatase Cdc25

which under favourable conditions removes the inhibitory phosphates present within

the MPF complex.

However, DNA is frequently damaged prior to mitosis, and, to prevent transmission

of this damage to daughter cells, the cell cycle is arrested via inactivation of the

Cdc25 phosphatase.

Page 15: V7: cell cycle

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Metaphase checkpoint

Cellular ProgramsWS 2010 – lecture 7

www.wikipedia.org

The mitotic spindle checkpoint occurs at the point in metaphase where all the chromosomes have/should have aligned at the mitotic plate and be under bipolar tension.

The tension created by this bipolar attachment is what is sensed, which initiates the anaphase entry. This sensing mechanism allows the degradation of cyclin B, which harbours a D-box (destruction box).

Degradation of cyclin B ensures that it no longer inhibits the anaphase-promoting complex, which in turn is now free to break down securin. The latter is a protein whose function is to inhibit separase, the protein composite responsible for the separation of sister chromatids.

Once this inhibitory protein is degraded via ubiquitination and subsequent proteolysis, separase then causes sister chromatid separation. After the cell has split into its two daughter cells, the cell enters G1.

Page 16: V7: cell cycle

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The classical model of cell-cycle control

Cellular ProgramsWS 2010 – lecture 7

Nature Reviews Molecular Cell Biology 9, 910-916 (2008)

Cyclin-dependent kinases (cDKs) trigger the transition from G1 to S phase and

from G2 to M phase by phosphorylating distinct sets of substrates.

The metaphase-to-anaphase transition requires the ubiquitylation and

proteasome-mediated degradation of mitotic B-type cyclins and various other

proteins, and is triggered by the anaphase-promoting complex/cyclosome

(APc/c) e3 ubiquitin ligase

Page 17: V7: cell cycle

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The classical model of cell-cycle control

Cellular ProgramsWS 2010 – lecture 7

Nature Reviews Molecular Cell Biology 9, 910-916 (2008)

cDK1 and cDK2 both show promiscuity in

their choice of cyclin partners and can bind

cyclins A, B, D and E,

whereas cDK4 and cDK6 only partner D-

type cyclins.

Thick lines represent the preferred pairing

for each kinase

Page 18: V7: cell cycle

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The classical model of cell-cycle control

Cellular ProgramsWS 2010 – lecture 7

Nature Reviews Molecular Cell Biology 9, 910-916 (2008)

According to the classical model of cell-cycle control,

D-type cyclins and cDK4 or cDK6 regulate events in early G1 phase (not shown),

cyclin e–cDK2 triggers S phase,

cyclin A–cDK2 and cyclin A–cDK1 regulate the completion of S phase,

and cDK1–cyclin B is responsible for mitosis.

But see Paper 7 ....

Page 19: V7: cell cycle

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Tim Hunt about these new experiments ...

Cellular ProgramsWS 2010 – lecture 7

Nature Reviews Molecular Cell Biology 9, 910-916 (2008)

According to the classical model of cell-cycle control ......The first serious blow to this oderly scheme was the discovery that mice that lack CDC2, although infertile, are viable and healthy....Deletion of other CDKs and cyclins in mice led to a ruther revision of the „specialized CDK“ hypothesis for the mammalian cell cycle....Santamaria et al. Recently published the ultimate step in this line of work....

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Tim Hunt about these new experiments ...

Cellular ProgramsWS 2010 – lecture 7

Nature Reviews Molecular Cell Biology 9, 910-916 (2008)

Why were the earlier experiments so misleading?Quite simply, they were not sufficiently rigorous.

Antibody injection and antisense experiments are inherently difficult to control and interpret correctly, and they cannot substitute for ablations that are achieved using gene-targeting.

Although dominant-negative mutants give clear results, they can be problematic if several kinases share the same activating partners.


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