+ All Categories
Home > Documents > West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm...

West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm...

Date post: 25-Jun-2018
Category:
Upload: doantram
View: 216 times
Download: 0 times
Share this document with a friend
35
West Nile Virus West Nile Virus Carol Glaser, DVM, MPVM, MD West Nile Virus Workshop December 9, 2004
Transcript
Page 1: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

West Nile VirusWest Nile Virus

Carol Glaser, DVM, MPVM, MDWest Nile Virus Workshop

December 9, 2004

Page 2: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Panel MembersPanel Members

Rachel Civen, MD, MPH − Los Angeles County

Eric Frykman, MD, MPH − San Bernardino County

Carol Glaser, DVM, MPVM, MD− DHS Viral and Rickettsial Disease Laboratory

Cynthia Jean, MPH− DHS Viral and Rickettsial Disease Laboratory

Anne Kjemtrup, DVM, MPVM, PhD− DHS Vector-Borne Disease Section

Page 3: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Presentation OutlinePresentation OutlineHuman cases in 2004 − Summary of testing and reporting process for

regional laboratory network (public health labs and Kaiser) and commercial laboratories

− Expectations for California -- 2004− National and State numbers

Issues for 2005− WNV being made reportable− Communication between LHDs and vector control

agencies− Inconsistent numbers State vs County− Surveillance and clinical issues

Page 4: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Background: Background: Testing and Testing and

Reporting of Human Reporting of Human West Nile Virus Cases West Nile Virus Cases

Page 5: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

WNV Testing AlgorithmWNV Testing Algorithm

SPECIMENS(serum, CSF)

Requests for West Nile virus testing

Submittedwith

case hx

COMMERCIALLABORATORY

e.g. Quest, Focus, Specialty

HEALTHDEPARTMENT

(LOCAL/STATE)

Page 6: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

WNV Testing WNV Testing -- Public Health LabsPublic Health Labs

Submittedwith

case hx

Specimens for CA Encephalitis Project

(includes WNV testing)

Report probable cases(after WNV is established)

Forward specimens toVRDL for further testing

SPECIMENS(serum, CSF)

LOCAL HEALTHDEPARTMENTLABORATORY

(n=33)

STATE VIRAL& RICKETTSIAL

DISEASELABORATORY

Page 7: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL
Page 8: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Testing for WNVTesting for WNV

In public health laboratories:Preliminary positives - need two of the following different assays positive:− EIA IgM positive− EIA IgG positive− IFA IgM positive

Confirmation− PRNT test: takes ~1-2 weeks

Page 9: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Turnaround Time (VRDL)Turnaround Time (VRDL)Time from receipt of specimen report back to county:− Positives:

− Preliminary, straightforward result: 1-3 days− Preliminary indeterminate: indefinite− Confirmation (first positives in county): ~2 weeks− For press reports-we went with preliminary positives

− First positive in a county: called health officer & laboratory director; after first 10 or so cases: email distribution list generated

− Negatives: 3-5 days : usually via email

Page 10: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

WNV Testing WNV Testing -- Commercial LabsCommercial Labs

Forward IgM-positivespecimens to VRDL

SPECIMENS(serum, CSF)

COMMERCIALLABORATORY

e.g. Quest, Focus, Specialty

STATE VIRAL& RICKETTSIAL

DISEASELABORATORY

Results

Page 11: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Notes: Commercial Lab TestingNotes: Commercial Lab TestingCommercial labs receive specimens from many different statesLaboratories often get − Name of patient− Date of birth− Ordering clinician OR the laboratory where specimen came from

(e.g hospital or clinic name)

− County of residence not usually specified—this information can be obtained but takes some back-tracking

− No clinical information: encephalitis vs meningitis vs fever vsasymptomatic

− VERY limited information on case available to lab

Page 12: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Commercial Laboratory Commercial Laboratory WNV TestingWNV Testing

Agreement made with Quest, Focus and Specialty laboratories in 2004 for positive WN specimens to be sent to VRDL Often batched, sometimes weeks after initial testing − With following info;

− Name− Gender− Date of birth or age− Sometimes but not always:

address, county of residence or Clinician

Voluntary on the part of the commercial lab

Page 13: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Collaboration with KaiserCollaboration with Kaiser

Kaiser Regional laboratories testing for West Nile IgM

− Agreement to send any positives to VRDL for additional testing

Page 14: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

How much testing was there for How much testing was there for WNV in CA in 2004?WNV in CA in 2004?

33 local public health laboratories performed WNV testing: >2500 specimens (~1500 individuals)VRDL : 1750 individuals tested at VRDL (overlap with above)Commercial labs tested ‘a few thousand’ (estimate)− >200 specimens received by VRDL from commercial

laboratoriesKaiser South tested 2000+ individualsKaiser North tested ~140 individuals

Page 15: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Human cases 2004Human cases 2004

Page 16: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Colorado was the ‘epicenter’ in 2003…Colorado was the ‘epicenter’ in 2003…Prediction: California would be the Prediction: California would be the

epiepi--center in 2004center in 2004

Colorado had : 2947 cases, 63 deathsColorado population: 4.3 million residents

California population: 35 million residents“projecting for our population”: ~24,000 cases, ~500 deaths

Page 17: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

As of November 30, 2004As of November 30, 2004n=2359 casesn=2359 cases

Page 18: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

0

5

10

15

20

25

30

35

40

45

50

55

60

Num

ber of Cases

2/21/20042/28/20043/6/20043/13/20043/20/20043/27/20044/3/20044/10/20044/17/20044/24/20045/1/20045/8/20045/15/20045/22/20045/29/20046/5/20046/12/20046/19/20046/26/20047/3/20047/10/20047/17/20047/24/20047/31/20048/7/20048/14/20048/21/20048/28/20049/4/20049/11/20049/18/20049/25/200410/2/200410/9/200410/16/200410/23/200410/30/200411/6/200411/13/2004

Week of Onset**

Human West Nile Virus CasesCalifornia, 2004

WNNDWNFUNK

+ bird (2/24/04)

+ mosquito(04/14/04)

+ human(5/14/04)

+ chicken(5/17/04)

+ horse(06/20/04)

As of December 7, 2004 Total number of human West Nile cases: 766* West Nile Neuroinvasive Disease: 221 West Nile Fever: 277 Unknown: 268

Source: Viral & Rickettsial Disease Laboratory California Department of Health Services

* Onset dates not available for all patients** Birds: date of collection; Mosquitos: date of collection; Chickens: date of probable seroconversion

Page 19: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

West Nile Virus West Nile Virus -- California, 2004 California, 2004

As of December 7, 2004:

819 human infections from 23 counties− 66 from blood banks 13 developed symptoms

766 symptomatic cases− 277 West Nile fever (WNF)

− 221 West Nile neuroinvasive disease (WNND)

− 268 unknown clinical presentation 70% of these are specimens from commercial labs

25 fatalities

Page 20: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Human WNV Cases, California, 2004* (n=459**)Human WNV Cases, California, 2004* (n=459**)

0

10

20

30

40

50

60

7005

/01/

0405

/08/

0405

/15/

0405

/22/

0405

/29/

0406

/05/

0406

/12/

0406

/19/

0406

/26/

0407

/03/

0407

/10/

0407

/17/

0407

/24/

0407

/31/

0408

/07/

0408

/14/

0408

/21/

0408

/28/

0409

/04/

0409

/11/

0409

/18/

0409

/25/

0410

/02/

0410

/09/

0410

/16/

04

Week of Onset

Num

ber

of C

ases

UNKWNNDWNF

* As of December 7, 2004** Onset dates not available for all patients

Page 21: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

West Nile Virus West Nile Virus -- California, 2004 California, 2004

Of the 766 symptomatic cases:

− 62% male− Median age all cases = 52 years (range: 2-94)− Median age WNND = 58.5 years (range: 4-91)− Median age WNF = 49 years (range: 7-89)

Of the 25 WNV-associated fatalities:− Median age = 76 years (range: 57-91)

Page 22: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Pediatric (<18 yrs) Cases, 2004Pediatric (<18 yrs) Cases, 2004

386 tested27 WNV-positive cases 26 with available clinical data− 15 with West Nile fever− 11 with neuroinvasive disease

Page 23: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Human WNV Incidence, by Age Group and Clinical CategoryCalifornia, 2004* (n=493)

0

0.5

1

1.5

2

2.5

3

3.5

0-9 10-19 20-29 30-39 40-49 50-59 60-69 70-79 80+Age Group

Inci

denc

e pe

r 100

,000

WNF

WNND

* As of December 7, 2004

Page 24: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Human WNV Cases by Age Group and Clinical CategoryCalifornia, 2004* (n=493)

0

20

40

60

80

100

120

0-9 10-19 20-29 30-39 40-49 50-59 60-69 70-79 80+Age Group

Num

ber o

f Cas

es

WNNDWNF

* As of December 7, 2004

Page 25: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Human WNV Cases by Race/Ethnicity and Clinical CategoryCalifornia, 2004* (n=393)

0

50

100

150

200

250

WHITE HISPANIC API BLACK OTHERRace/Ethnicity

Num

ber o

f Cas

es

WNND

WNF

Unknown

* As of December 7, 2004

Page 26: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

2005 Issues2005 Issues

Page 27: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

West Nile virus becomes West Nile virus becomes ‘reportable’ in 2005‘reportable’ in 2005

By clinicianBy laboratory How will that change things?− Probably will help but will still have problems:

− Clinicians are notoriously bad at reporting (estimates are that only ~10% diseases reported)

− Laboratory reporting generally works well but if the commercial laboratories don’t have complete data, e.g. county of residence, clinical information, etc inherent delays

Solutions?

Page 28: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Communication Issues for 2005Communication Issues for 2005

Inconsistencies between State and county-reported line listing of human cases--how to fix?− Ask counties to use State ID as well as county

ID (e.g. San Bernardino)− Website: updated twice/week, probably not

do-able more often− Blood bank data used by State, inconsistently

used by county, will ask for consistency

Page 29: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Communication Issues for 2005Communication Issues for 2005

Telecons in 2004 went wellIn 2005:− Health officers and Communicable disease

officers ~ every 2 weeks − Laboratory Directors/staff ~ every 2 weeks − Vector Control Districts ~every 2 weeks

Page 30: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Communication Issues for 2005Communication Issues for 2005Information from LHD to Vector control agency:− Ensure Vector control given complete information

from LHD− Need to know where this is a problem− LAC/SB, please comment− Need to ensure confidentiality of information—not to press

What information to give to the press?− Developed ‘guidelines’ for how much info to give

based on size of county and circumstances of the case

Page 31: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Laboratory Issues for 2005Laboratory Issues for 2005Local public health laboratories will continue to test human cases as in 2004VRDL will not request serum from commercial laboratories to retest− Agreement in 2004 >95%− Problems were more with interpretation at

clinician and local level—need to educate− develop guidelines for counties for

positive/negative

Page 32: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Surveillance issues for 2005Surveillance issues for 2005What to count, track and compare− Neuroinvasive

− Encephalitis− Meningitis− Acute flaccid paralysis

− These numbers are probably fairly reliable…almost all neuroinvasive cases seen by clinician, most clinicians probably test and +/- whether reported

− These cases are probably most reliable for comparison of year to year trends

− First several years CDC tracked primarily neuroinvasivedisease cases

Page 33: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Surveillance issues for 2005Surveillance issues for 2005West Nile fever cases—how valuable is this data?We know it is only a sampling of the cases…but what proportion?− inconsistent visits to health care provider− inconsistent testing− these cases more likely to be falsely negative early on− inconsistent reporting

Will continue to test but recognize limitations of these dataBlood bank data

Page 34: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Surveillance issue for 2005Surveillance issue for 2005

When to call a death a ”WNV-associated death”− Instances where a patient is WNV positive

and death occurs but the two not necessarily related

− Reviewing the 25 deaths related to WNV for last season and will develop guidelines

Page 35: West Nile Viruswestnile.ca.gov/website/wnv_wkshp_12_9_04/5 Glaser WNV...WNV Testing Algorithm SPECIMENS (serum, CSF) Requests for West Nile virus testing Submitted with case hx COMMERCIAL

Clinical Issues for 2004/2005Clinical Issues for 2004/2005

Follow-up studies:− Neuroinvasive diseases: 3, 6, 12 month

followup− West Nile fever: 3 month follow-up

Clinical trials− 3 different randomized trials for WNV

treatments, very poor enrollment


Recommended