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RESEARCH
A Vector Design that Allows Fast and Convenient Productionof Differently Tagged Proteins
Omar Scapolan • Andrea N. Mazzarello • Maria Bono •
Marzia Occhino • Vasily Ogryzko • Marco Bestagno •
Paolo Scartezzini • Silvia Bruno • Franco Fais • Fabio Ghiotto
� Springer Science+Business Media, LLC 2011
Abstract Recombinant-tagged proteins have a wide-
spread use in experimental research as well as in clinical
diagnostic and therapeutic approaches. Well-stocked sets
of differently tagged variants of a same protein would be of
great help. However, the construction of differently tagging
vectors is a demanding task since cloning procedures need
several tailored DNA inserts. In this study, we describe a
novel vector system that allows a cost- and time-effective
production of differently tagged variants of a same protein
by using the same DNA fragment and a set of vectors each
carrying a different tag. The design of these expression
vectors is based on an intronic region that becomes func-
tional upon cloning the insert sequence, splicing of which
attaches a certain tag to the protein termini. This strategy
allows for the cloning of the fragment that codes for the
protein of interest, without any further modification, into
different vectors, previously built and ready-to-use, each
carrying a tag that will be joined to the protein. Proof of
principle for our expression system, presented here, is
shown through the production of a functional anti-GD2 Fab
fragment tagged with biotin or polyhistidine, or a combi-
nation of both, followed by the demonstration of the
functional competencies of both the protein and the tags.
Keywords Expression vector � Protein tag � Recombinant
antibody � Fab fragment � Immunotherapy
Introduction
Recombinant fusion proteins are nowadays a fundamental
tool in several fields of experimental research and clinical
applications, e.g., for protein functional studies or patient-
specific antibody-based therapies.
Tagging a protein allows the analysis of different
aspects of its function, especially if specific antibodies are
not available. Depending on the tag design, it is possible to
localize, label with a secondary reagent, or purify the given
protein. For example, a protein can be tagged with GFP
family proteins, polyhistidine tags, and antigenic epitopes
for which specific monoclonal antibodies are available
(e.g., c-myc, V5) or peptides bound to one biotin molecule
[1, 2].
In situ recombinant antibody-based approaches are
becoming promising therapies in several malignancies.
However, their tumor-targeting efficacy has often remained
to be improved, especially in the case of solid tumors.
Modification of their format, i.e., conversion of monova-
lent recombinant antibodies (r-Abs) into multivalent for-
mats increases their functional affinity. Oligomerization
domains from non-Ig proteins have been proposed to
Omar Scapolan and Andrea N. Mazzarello contributed equally to the
work.
O. Scapolan � A. N. Mazzarello � M. Bono � M. Occhino �S. Bruno � F. Fais (&) � F. Ghiotto
Department of Experimental Medicine, University of Genoa, Via
De Toni 14, 16132 Genoa, Italy
e-mail: [email protected]
V. Ogryzko
Universite Paris-Sud 11, CNRS, Interactions Moleculaires et
Cancer, Institut de Cancerologie Gustave-Roussy, UMR 8126,
Villejuif, France
M. Bestagno
International Centre for Genetic Engineering and Biotechnology,
AREA Science Park Padriciano 99, 34012 Trieste, Italy
P. Scartezzini
Department of Gerontology, E.O. Ospedali Galliera, Genoa,
Italy
Mol Biotechnol
DOI 10.1007/s12033-011-9469-4
generate multimeric r-Abs. As an example, fusion proteins
of single chain Fv (scFv) with the NC1 trimerization region
of collagen XVIII resulted in trimeric antibodies [3], and
fusion of scFv with the multimerization domain of p53
generated tetrameric antibodies [4]. Furthermore, antitu-
mor effector molecules (e.g., TNF-alpha or IL-2) fused to
recombinant antibodies that bind specific tumor antigens
have great promise in tumor immunotherapy.
The examples described above represent only a few of
the numerous applications of recombinant-tagged fusion
proteins. To date, multiple tagging strategies are not
straightforward since the preparation of differently tagged
proteins requires the use of different expression vectors,
each one with particular cloning requirements, thus making
the cloning a time-consuming task. It would be very
helpful if we have the possibility to produce differently
tagged variants of the same protein without undertaking
onerous processes. Fast and easy production of differently
tagged variants of a same protein should become routine in
research and clinical laboratories, which often need to
switch within a short time among different fusion variants.
In this study, we describe a novel expression vector
system that allows a cost- and time-effective production of
any recombinant protein with any different tag at its C
terminal. An experimental validation of the feasibility and
the functionality of this system are presented.
Material and Methods
Vectors
pPSI–BiotC Vector
The construction of the pPSI–BiotC vector was achieved
by introducing a fragment coding for a 50 incomplete
intron, a spacer and a biotin acceptor sequence into the
eucaryotic expression vector pIRESpuro3 (Clontech,
Mountain View, CA). The DNA fragment to be cloned into
the pIRESpuro3 vector was built using a sequential
amplification approach that allowed the joining of three
segments: an intron, originally belonging to the human
IgG1 gene, that is incomplete at the 50 end, a sequence
coding for the GGGGSGGGGSGGGGS spacer, and a
sequence coding for the GLNDIFEAQKIEWHE peptide—
a specific substrate for the Escherichia coli BirA enzyme
[5]. This enzyme binds a biotin molecule to the lysine
present in the substrate peptide [6]. In brief, the sequence
encoding the intron and the spacer was amplified using
primers Intron iCPF and Spacer R (Table 1) and a con-
struct previously made in our lab as template [7]. The
sequence coding the GLNDIFEAQKIEWHE peptide was
amplified by primers Spacer F and Tag iCPR (Table 1)
using, as template, a construct previously made in our lab
that carries the peptide. The two fragments were joined by
means of PCR amplification with primers Intron iCPF and
Biot iCPR (Table 1). The PCR product was cloned into the
pIRESpuro3 expression vector cut with EcoRI and BamHI
restriction enzymes, by means of a commercial kit
designed to join DNA fragments that have 15 bases of
homology at their ends (in this case DNA insert and line-
arized vector), namely, the InFusionTM
Advantage PCR
Cloning Kit (Clontech), following the manufacturer’s
instructions.
pPSI–HisTag Vector
The pPSI–HisTag vector was built following the same
strategy as the pPSI–BiotC vector. The fragment to be
cloned into the pIRESpuro3 vector was built amplifying
the intron and the spacer as for pPSI–BiotC and then using
the primers Intron iCPF and HisTag iCPR (Table 1) for
adding six histidines at the 30 of the sequence. Again, the
resulting insert was cloned into the EcoRI/BamHI cut
pIRESpuro3 vector using the InFusionTM
Advantage PCR
Cloning Kit (Clontech).
pPSI–BHC Vector
The pPSI–BHC vector is characterized by the presence of
both the sequence substrate of the BirA enzyme and six
histidines with a spacer sequence (GGGGSGGGGS)
between the two. It was built following the same strategy
as the previous vectors. The fragment to be cloned into the
pIRESpuro3 vector was built amplifying the intron and the
spacer from pPSI–BiotC vector with primers Intron iCPF
and ExtHis R and then using primers Intron iCPF and
BioHisTag iCPR to complete the spacer and to add the
histidines (see Table 1 for primer sequences). The resulting
insert was cloned into the EcoRI/BamHI cut pIRESpuro3
vector using the InFusionTM
Advantage PCR Cloning Kit
(Clontech).
For all PCR reactions, the proofreading PrimeSTAR�
HS DNA polymerase (Takara, Shiga, Japan) was used. For
each cloning procedure, several clones were sequenced
with an automated sequenator (Applied Biosystems, Foster
City, CA), and one clone with the correct sequence was
selected for further cloning experiments.
Constructs
pBiGFP/CD33L–hBirA
The pBiGFP/CD33L–hBirA construct was built starting
from the pBiEGP vector, previously made in our lab, that
carries an IRES sequence followed by the EGFP gene,
Mol Biotechnol
used as reporter gene for expression of the upstream-cloned
gene. This vector carries the resistance for geneticin. The
hBirA gene, a version of the E. coli BirA gene that
underwent codon optimization, was amplified from a
construct previously described [8]. By means of two rounds
of PCR amplifications using, first, primers CD33L/hBirA F
and hBirA BamHI CPR, and then CD33L EcoRI CPF and
hBirA BamHI CPR (Table 1), we inserted, at the 50 of the
gene, the leader sequence of the CD33 protein, thus
allowing hBirA to enter the endoplasmic reticulum. The
resulting fragment was then inserted in the pIRESneo
vector (Clontech). Subsequently, after amplification with
the primers CD33BirA iCPF and CD33BirA iCPR primers
(Table 1), the CD33L/hBirA sequence was subcloned into
the pBiGFP vector using the InFusionTM
Advantage PCR
Cloning Kit (Clontech).
pIREShygro/antiGD2VL
The light chain variable region (VL) of the anti-GD2
monoclonal antibody (mAb) 126 was amplified using the
pcDNA3–mocSIP construct as template [9]. The latter
construct codes for a single chain molecule that includes
the VL leader sequence, VL and VH regions of the 126
mAb. The VL region was amplified together with its leader
sequence. In order to obtain a chimeric human/mouse Fab,
the human constant kappa region was added to the 126
mAb variable region by means of a sequential PCR
approach: the pcDNA3–mocSIP construct was amplified
with primers GD2VK iCPF and VK/CK R, while human B
cell cDNA with primers VK/CK F and IGKC iCPR. The
two fragments were then joined using primers GD2VK
iCPF and IGKC iCPR (Table 1). The resulting chimeric
kappa light chain was cloned into the pIREShygro vector
(Clontech) by means of the InFusionTM
Advantage PCR
Cloning Kit (Clontech).
pPSI–BiotC/antiGD2VH, pPSI–HisTag/antiGD2VH,
and pPSI–BHC/antiGD2VH
In this case as well, the heavy chain variable region (VH) of
the 126 mAb was amplified using the pcDNA3–mocSIP
construct as template. However, since the VH region in the
pcDNA3–mocSIP construct lacks the leader sequence, we
inserted the b2-microglobulin leader sequence at the 50 of
the VH segment. To complete the chimeric Fab we added
the CH1 domain of the human IgM constant region at the 30.In brief, three rounds of PCR amplification with primers
b2 mL/GD2VH F and VH/CH R, b2 mL/joining F and
VH/CH R, GD2VH iCPF, and VH/CH R, respectively,
Table 1 Primers used for the construction of vectors and constructs
The 15 base pairs of the primer that were identical with the 15 base pairs of each extremity of the cut vector, as requested by the InFusionTM
Advantage PCR Cloning Kit (Clontech), are underlined. The six base pairs of the primer IgMCH1 iCPR used to reconstitute the 50 boundary
of the intron are shaded in light gray
Mol Biotechnol
were performed to build the b2-microglobulin leader
sequence/VH fragment using the pcDNA3–mocSIP con-
struct as template. To build the IgM CH1 fragment a single
round of PCR amplification with primers VH/CH F and
IgM CH1 iCPR was performed, using human B cell cDNA
as template. Finally, the two fragments were joined by PCR
amplification with primers GD2VH iCPF and IgM CH1
iCPR to build the complete b2-microglobulin leader
sequence/VH/IgMCH1 fragment (see Table 1 for primer
details). The PCR product was subsequently cloned into the
pPSI–BiotC, pPSI–HisTag and pPSI–BHC vectors by
means of the InFusionTM
Advantage PCR Cloning Kit
(Clontech). For all PCR reactions the proofreading
PrimeSTAR� HS DNA polymerase (Takara) was used. For
every cloning procedure, several clones were sequenced
with an automated sequenator (Applied Biosystems), and
one clone with the correct sequence was selected for cell
transfection.
Cell Line Cultures, Transfections, and Supernatant
Production
HEK293, HeLa, and IMR32 cell lines were cultured in
DMEM GlutamaxTM
medium (Invitrogen, Milan, Italy)
supplemented with penicillin, streptomycin, and 10% of
fetal calf serum (Invitrogen). Transfections and co-trans-
fections of the HEK293 cell line were performed using
Lipofectamine 2000 (Invitrogen) following the manufac-
turer’s instructions. Transfected cells were selected with
Geneticin (Invitrogen), Hygromycin (Invitrogen), and
Puromycin (Invitrogen) as requested, at the concentra-
tion of 300 lg/mL for Geneticin, and Hygromycin, and
0.5 lg/mL for Puromycin. For the production of the bio-
tinylated recombinant anti-GD2 Fab fragment, stably
transfected HEK293 cells were cultured in OptimemTM
medium (Invitrogen) without adding fetal calf serum for
72–96 h. For the production of the biotinylated recombi-
nant antiGD2 Fab fragment, biotin was added to the
medium at the concentration of 0.2 mg/L. For staining
purpose, supernatants were concentrated 35–40 times using
Amicon Ultra 30 K concentrators (Millipore, Billerica,
MA). For the production of the biotinylated/histidine-tag-
ged recombinant anti-GD2 Fab fragment, stably transfected
HEK293 cells were cultured in DMEM GlutamaxTM
med-
ium (Invitrogen) supplemented with penicillin, streptomy-
cin, 10% of fetal calf serum (Invitrogen), and 0.2 mg/L
biotin for 72–96 h.
Biochemical Analysis
Polyhistidine-tagged and biotinylated/polyhistidine-tagged
recombinant anti-GD2 Fab fragments were purified by
adding 10 and 100 mL, respectively, of culture medium to
nickel-charged resin columns (Ni–NTA agarose, Qiagen,
Milan, Italy). Resin was washed and the bound protein
eluted according to the manufacturer’s instruction. We
obtained 15 lg of recombinant protein for each milliliter of
culture supernatant. The purified protein was dialyzed and
concentrated ten times in PBS with Amicon Ultra 30 K
concentrators (Millipore). The polyhistidine-tagged
recombinant anti-GD2 Fab fragment was detected by
sodium dodecyl sulfate polyacrylamide gel electrophoresis
(SDS-PAGE) after loading 26 lg of protein on 12% gel
followed by Coomassie blue staining. The biotinylated/
polyhistidine-tagged recombinant anti-GD2 Fab fragment
was detected by SDS-PAGE after loading 15 lg of protein
on a 12% gel followed by Coomassie blue staining, and
was used for staining experiments.
Cell Staining
IMR32, HEK293, and HeLa cell lines were stained using
either the anti-GD2 126 mAb or the recombinant biotin-
ylated or biotinylated/histine-tagged anti-GD2 Fab frag-
ments: 3 9 105 cells were stained re-suspending them in
100 lL of 126 mAb supernatant or 100 lL of 20–409
biotinylated r-anti-GD2 supernatant or adding to the cells
0.5–4 lg of biotinylated/polyhistidine-tagged purified
r-anti-GD2. PE-conjugated goat anti-mouse polyclonal
antibody (Southern Biotech, Birmingham, AL) and PE-
conjugated streptavidin (Ancell Corporation, Bayport, MN
USA) were used as secondary reagents. Stained cells were
analyzed by means of a FACSCalibur (BD Biosciences,
Franklin Lakes, NJ) using the CellQuest software.
Results
Design of a Vector System Suitable for the Production
of a Protein Set with Different Tags
The aim of this study is to create an expression vector
system being able to produce sets of tagged proteins, dif-
fering from each other only for the tag, by a convenient and
efficient cloning strategy. The main novelty of this vector
system resides in the presence of an incomplete intron at its
50 end. This 50 incomplete intron is followed by a sequence
that codes for a spacer and, in turn, by a tag (Fig. 1a). The
insertion of a sequence carrying the intron boundary
sequence at its 30 end (Fig. 1b) allows for the reconstitution
of a complete functional intron (Fig. 1c). The splicing of
the complete intron will give rise to an mRNA coding for
the protein of choice joined to the spacer and the tag
(Fig. 1d). Altogether, this strategy theoretically allows for
a timely joining of any given recombinant protein to
diverse tags, provided that the corresponding vectors
Mol Biotechnol
carrying the respective tags are set and available. To
demonstrate experimentally that the above expression
system is indeed efficient and cost-effective, we describe
the production of a recombinant Fab fragment conjugated
by three different tags and demonstrate the functional
features of the products.
Vector Construction
We first produced three vectors each with one of the fol-
lowing tags: one tag that was a biotinylation substrate, one
tag made up of six histidines, or one-third tag made by a
combination of the first two tags. The first vector (pPSI–
BiotC) was built by exploiting the ability of the E. Coli
biotin ligase BirA to attach one biotin molecule to the
lysine of a given sequence [6]. This vector was built by
joining a 50 incomplete intron, one sequence coding for a
peptide with spacer function and one-sequence coding for
the shortest peptide still working as substrate for the BirA
enzyme [5]. The second vector (pPSI–HisTag) was built
exactly as the pPSI–BiotC vector except for the tag
sequence that was designed to code for six histidines. The
third vector (pPSI–BHC) was built as the pPSI–BiotC
vector but adding at the 30 a further shorter spacer and a
polyhistidine tag (see ‘‘Materials and Methods’’ section for
details). The use of these three vectors eventually leads to
the production of biotin-, polyhistidine-, and biotin/poly-
histidine-tagged proteins, respectively.
Construction of a Cell System for Intracellular
Enzymatic Protein Biotinylation
Although polyhistidine-tagged proteins are directly
expressed by the pPSI–HisTag vector, biotin-tagging
requires one further step, namely, the intracellular enzy-
matic biotinylation of the pPSI–BiotC and pPSI–BHC
products. To create a cell system devoted to this kind of
protein biotinylation, we produced a cell line expressing a
variant of the BirA enzyme capable to enter the endo-
plasmic reticulum (see ‘‘Materials and Methods’’ section).
To this purpose, we built a bicistronic construct carrying a
codon-optimized engineered version of the BirA enzyme
(hBirA) [8] followed by the EGFP sequence functioning as
reporter gene (pBiGFP/CD33L–hBirA). The evaluation of
EGFP fluorescence intensity on pBiGFP/CD33L–hBirA
transfected HEK293 cells allowed us to exclude clones
Fig. 1 Schematic drawing of the design of pPSI–BiotC, pPSI–
HisTag and pPSI–BHC vectors. a empty vector: the light gray boxes
indicate the two 15-bp regions flanking the EcoRI site used to clone
the insert using the InFusionTM
Advantage PCR Cloning Kit. b vector
cut with EcoRI and insert to be cloned; the crossed lines indicate the
recombination of the regions of homology between insert and vector.
c complete construct with the reconstituted functional intron.
d immature and mature transcripts. See the ‘‘Results’’ section for
more details
Fig. 2 Drawing of the three variants of the r-anti-GD2 molecules.
a r-anti-GD2 tagged with a peptide substrate for biotin ligase that
enzymatically attaches one biotin to the lysine of the peptide. b r-anti-
GD2 tagged with six histidines. c r-anti-GD2 tagged with a peptide
substrate for biotin ligase and a polyhistidine tag
Mol Biotechnol
with too high, and possibly toxic, hBirA expression. By
proper antibiotic selection, a stable HEK293hBirA?
transfectants was obtained, which was able to enzymati-
cally attach a biotin molecule to the lysine of any BirA
substrate peptide in the secretory pathway, provided that
biotin is added to the cell culture medium.
Production of Biotin-, Polyhistidine-, and Biotin/
Polyhistidine-Tagged Fab Fragment
As a proof of principle, we validated experimentally our
expression system by producing the Fab fragment of an
anti-GD2 monoclonal antibody, the 126 mAb, tagged with
Fig. 3 Analysis of the staining
efficiency of the biotinylated
r-anti-GD2 molecule. The
GD2? IMR32 neuroblastoma
cell line was stained with
100 lL of 126 mAb supernatant
(a), with 100 lL of supernatant
from HEK293hBirA? cells
stably co-transfected with
pIREShygro/antiGD2VL and
pPSI–BiotC/antiGD2VH,
concentrated 20 times (b) and
40 times (c) (r-anti-GD2), and
with 100 lL of supernatant
from untransfected
HEK293hBirA? cells
concentrated 40 times (d). The
HEK293 and HeLa cells, which
are negative for GD2
expression, were stained with
the 100 lL of 126 mAb
supernatant (e, g) or with
100 lL of supernatant from
HEK293hBirA? cells stably
co-transfected with the
pIREShygro/antiGD2VL and
pPSI–BiotC/antiGD2VH
vectors concentrated 40 times
(f, h) (r-anti-GD2)
Mol Biotechnol
biotin, polyhistidine or the combination of both and
investigated the functional competence of both the protein
and the tags. We first built the constructs for the heavy and
light chain variable regions of the 126 mAb (see ‘‘Materials
and Methods’’ section for details). The VL containing a
leader sequence was attached to the constant region of the
human kappa chain resulting in a mouse/human chimeric
light chain and then cloned into the pIREShygro expression
vector to obtain the pIREShygro/antiGD2VL construct.
The VH, provided with a leader sequence, was attached to
the CH1 domain of the human IgM constant region. This
sequence, which represents a chimeric heavy chain frag-
ment, was cloned into the pPSI–BiotC, the pPSI–HisTag
and the pPSI–BHC vectors, thus leading to the pPSI–
BiotC/antiGD2VH, pPSI–HisTag/antiGD2VH and pPSI–
BHC/antiGD2VH constructs, respectively. The addition of
the inserts was performed using a recombination system,
namely, the InFusionTM
Advantage PCR Cloning Kit
(Clontech). However, any classical approach based on
restriction enzymes can be employed. Finally, the pIRE-
Shygro/antiGD2VL construct (that code was co-transfected
together with either the pPSI–BiotC/antiGD2VH, pPSI–
HisTag/antiGD2VH and pPSI–BHC/antiGD2VH con-
structs (that code for the VH chain) into the HEK293hBirA?
(pPSI–BiotC/antiGD2VH and pPSI–BHC/antiGD2VH) or
into the wild type HEK293 cell line (pPSI–HisTag/
antiGD2VH). Proper antibiotic treatment selected stable
cell lines that released in the supernatant the Fab fragment
of the 126 anti-GD2 mAb (called herein r-anti-GD2),
biotinylated (Fig. 2a), histidine-tagged (Fig. 2b), and bio-
tinylated/polyhistine-tagged (Fig. 3c). The supernatants
collected after 72- or 96-h culturing were used for
r-anti-GD2 purification or immunofluorescence staining
experiments.
Functional Validation
Biotin-tagged r-anti-GD2 was probed by flow cytometric
antigen-recognition experiments. IMR32 cells, known to
express the GD2 antigen on their surface, and HEK293 and
HeLa cells, which do not, were utilized. Cell surface
immunofluorescence of IMR32 cells, stained with con-
centrated (209 or 409) supernatant of HEK293hBirA?
cells expressing biotinylated r-anti-GD2 (Fig. 3b and c),
and subsequently with PE-conjugated streptavidin, was
similar to that of IMR32 cells stained with the 126 mAb
and PE-conjugated anti-mouse IgG (Fig. 3a). Conversely,
negative immunofluorescence was observed for IMR32
cells stained with 409 concentrated supernatant obtained
by culturing, in the presence of biotin, untransfected
HEK293hBirA? cells (Fig. 3d). Negative results were
obtained as well when using the 409 concentrated r-anti-
GD2 supernatant in control cell lines negative for GD2
surface expression (Fig. 3e–h). These data demonstrate that
the biotinylated anti-GD2 Fab fragment produced using our
expression system is highly suitable for providing a sen-
sitive and specific detection tool.
To probe the functional competence of the polyhistidine
tag as well, r-anti-GD2 collected from the supernatant
of wild-type HEK293 co-transfected with pIREShygro/
antiGD2VL and pPSI–HisTag/antiGD2VH was purified on
nickel-charged resin columns. Upon running the eluate on a
polyacrylamide gel and staining with Coomassie blue,
bands at the expected molecular weight were observed
(Fig. 4). Finally, to validate the functionality of the r-anti-
GD2 with both biotin and histidine tags, the supernatant of
HEK293hBirA? cell line co-transfected with pIREShygro/
antiGD2VL and pPSI–BHC/antiGD2VH constructs was
collected and purified on nickel-charged resin columns.
The supernatant that passed through the column was saved
for further tests. The eluate was concentrated 109 and used
to stain the IMR32 cell line. Flow cytometric measure-
ments of these samples further stained with PE-conjugated
streptavidin as a secondary reagent (Fig. 5c–e) demon-
strated a dose-sensitive binding to the GD2 antigen. Fur-
thermore, the flow through supernatant was concentrated
109 and used to stain the IMR32 cell line (Fig. 5b). No
binding to the cell surface was observed, demonstrating an
efficient binding of the polyhistidine tag to the resin.
Altogether, these data demonstrate the ability of expression
vectors designed in this study to produce fully functional
proteins attached to fully functional tags.
Discussion
In this study, we describe a vector design that allows the
production of differently tagged variants of a protein of
Fig. 4 Biochemical analysis of the histidine-tagged and biotiny-
lated/histidine-tagged r-anti-GD2 molecules. SDS-PAGE gel elec-
trophoresis of purified histidine-tagged r-anti-GD2 in both reducing
and non-reducing conditions (a). Comparison of the reduced
forms of histidine-tagged and biotinylated/histidine-tagged r-anti-
GD2 (b)
Mol Biotechnol
interest in a time- and cost-effective way: the amplified
DNA fragment coding for the selected protein is directly
cloned, without any further modification, into different
vectors, previously built and ready-to-use, each carrying a
particular tag that will be attached to the given protein at its
C terminus. The vector design is based on the reconstitu-
tion, upon the insert cloning, of a functional intron whose
splicing leads to the attachment of the tag to the C terminus
of the protein deprived of the stop codon. This expression
system has been validated by producing a biotinylated, a
polyhistidine-tagged and a biotinylated/polyhistidine-tag-
ged variant of the Fab fragment of the 126 mAb that binds
the antigen GD2. The GD2 molecule is a ganglioside
expressed on the surface of tumor cells of neuroectodermal
origin such as neuroblastoma, an embryonal tumor origi-
nating from sympathetic neural crest cells that represents
6–8% of all childhood cancers [10]. GD2 expression pat-
tern makes it a good target for cancer immunotherapy [11].
The biotinylated and biotinylated/histidine-tagged r-anti-
GD2 variants were produced using intracellular enzymatic
biotinylation, an approach that allows the secretion of the
biotinylated protein directly in the culture supernatant. In
staining experiments, both the biotinylated r-anti-GD2 and
the biotinylated/histidine-tagged r-anti-GD2 showed an
Fig. 5 Analysis of the staining
efficiency of the biotinylated/
polyhistidine-tagged r-anti-GD2
molecule. The GD2? IMR32
neuroblastoma cell line was
stained with the 126 mAb
supernatant (a), with 50 lL
column flow through
supernatant, concentrated 10
times (b), with 0.5 lg (c), 1 lg
(d), 2 lg (e), and 4 lg (f) of the
purified biotinylated/histidine-
tagged r-anti-GD2 Fab fragment
Mol Biotechnol
excellent binding capability of the Fab to the GD2 antigen
and a very good biotin–streptavidin binding. The polyhis-
tidine sequence has been shown to be fully functional as
well, since polyhistidine-tagged r-anti-GD2 was easily
purified. Altogether, our experiments demonstrate the
validity of our expression vector system for both the pro-
tein to be tagged and the tag itself. The feasibility of our
system was validated for tagging proteins at their C ter-
minus. Nevertheless, the same design concept can be used
to build vectors that tag the protein at the N terminus
(Fig. 6). In addition, our expression vector system allows
the design of vectors that join more than one tag to the
protein, sequentially at the same terminus, separated by a
small spacer.
We feel that our labor-saving technique for readily
tagging diverse molecules to antibodies represents an
appealing task in current times where mAbs are becoming
widely utilized both in vitro and in vivo. As an example,
we envisage the application of our expression system for
the production of recombinant antibodies with different
antigenic specificities by means of expression vectors each
tagged with domains for multimerization (e.g., NC1 tri-
merization region of collagen XVIII, p53 multimerization
domain) and/or effector proteins potentially useful for
tumor immunotherapy (e.g., IL2, TNF-alpha). Interest-
ingly, our expression vector system can be used to produce
Fab fragments as well, known to have a better diffusion
than whole mAbs and faster clearance. In addition, chi-
merization of the Fab by means of a human constant
region, as we did, and more in general the production of
humanized Fabs, warrants a reduced in vivo antigenicity of
the compound.
Acknowledgments This study was supported by grants from
Compagnia di San Paolo 4824 SD/CV, 2007.2880, AIRC (IG-10698),
Associazione ‘‘Davide Ciavattini’’ Onlus and Fondazione Maria
Piaggio Casarsa. The authors would like to thank Fondazione
Internazionale in Medicina Sperimentale (FIRMS) that provided
financial and administrative assistance.
References
1. Barat, B., & Wu, A. M. (2007). Metabolic biotinylation of
recombinant antibody by biotin ligase retained in the endoplas-
mic reticulum. Biomolecular Engineering, 24, 283–291.
2. Predonzani, A., Arnoldi, F., Lopez-Requena, A., & Burrone, O.
R. (2008). In vivo site-specific biotinylation of proteins within the
secretory pathway using a single vector system. BMC Biotech-nology, 8, 41.
3. Cuesta, A. M., Sanchez-Martin, D., Sanz, L., Bonet, J., Compte,
M., Kremer, L., et al. (2009). In vivo tumor targeting and imaging
with engineered trivalent antibody fragments containing colla-
gen-derived sequences. Public Library of Science One, 4, e5381.
4. Deyev, S. M., & Lebedenko, E. N. (2008). Multivalency: The
hallmark of antibodies used for optimization of tumor targeting
by design. BioEssays, 30, 904–918.
5. Beckett, D., Kovaleva, E., & Schatz, P. J. (1999). A minimal
peptide substrate in biotin holoenzyme synthetase-catalyzed
biotinylation. Protein Science, 8, 921–929.
6. Chapman-Smith, A., & Cronan, J. E. (1999). The enzymatic
biotinylation of proteins: A post-translational modification of
exceptional specificity. Trends in Biochemical Sciences, 24,
359–363.
7. Occhino, M., Ghiotto, F., Soro, S., Mortarino, M., Bosi, S.,
Maffei, M., et al. (2008). Dissecting the structural determinants of
the interaction between the human cytomegalovirus UL18 protein
and the CD85j immune receptor. Journal of Immunology, 180,
957–968.
8. Mechold, U., Gilbert, C., & Ogryzko, V. (2005). Codon opti-
mization of the BirA enzyme gene leads to higher expression
and an improved efficiency of biotinylation of target proteins
in mammalian cells. Journal of Biotechnology, 116, 245–
249.
Fig. 6 Schematic drawing of the notional design of the N-terminal
tagging variant of the vector system described. a empty vector: the
light gray boxes indicate the two 15 bp regions flanking the EcoRI
site used to clone the insert with the InFusionTM
Advantage PCR
Cloning Kit. b vector cut with EcoRI and insert to be cloned; the
crossed lines indicate the recombination of the regions of homology
between insert and vector. c complete construct with the reconstituted
functional intron. d immature and mature transcripts. Of note, the
primers used to amplify the insert to be cloned in the N tagging vector
are different from that used to amplify the insert to be cloned in the C
tagging vector
Mol Biotechnol
9. Occhino, M., Raffaghello, L., Burrone, O., Gambini, C., Pistoia,
V., Corrias, M. V., et al. (2004). Generation and characterization
of dimeric small immunoproteins specific for neuroblastoma
associated antigen GD2. International Journal of MolecularMedicine, 14, 383–388.
10. Maris, J. M., Hogarty, M. D., Bagatell, R., & Cohn, S. L. (2007).
Neuroblastoma. Lancet, 369, 2106–2120.
11. Gray, J. C., & Kohler, J. A. (2009). Immunotherapy for neuro-
blastoma: turning promise into reality. Pediatric Blood andCancer, 53, 931–940.
Mol Biotechnol