Date post: | 03-Mar-2023 |
Category: |
Documents |
Upload: | independent |
View: | 0 times |
Download: | 0 times |
ORIGINAL PAPER
Factors affecting diatom distribution in floodplain lakesof the southeast Murray Basin, Australia and implicationsfor palaeolimnological studies
Michael A. Reid Æ Ralph W. Ogden
Received: 18 October 2007 / Accepted: 1 July 2008 / Published online: 28 August 2008
� Springer Science+Business Media B.V. 2008
Abstract Diatom assemblages of surface sediments
in 46 billabongs from four river floodplains in the
southeast Murray-Darling Basin, Australia were
sampled to investigate drivers of species distribution.
The principal purpose of the study was to derive
information to aid interpretation of diatom-based
palaeoecological studies of these systems and of
floodplain lakes more generally. Patterns in billabong
diatom assemblages in relation to river reach,
hydrology and farming intensity on surrounding land
were examined, as were correlations with water
quality variables. Seasonal variation in billabong
water quality was high relative to spatial variation,
and spatial patterns in billabong water quality were
weak. In contrast, strong patterns were evident in
diatom assemblages. Three main patterns were
observed: (1) a distinction between billabongs dom-
inated by planktonic diatoms from those dominated
by benthic and attached forms; (2) differences in
diatom assemblages in billabongs on different river
reaches; and (3) differences in assemblages in
billabongs with different hydrology. Of all water
quality variables tested, total phosphorus (TP), total
nitrogen (TN) and pH exerted the strongest indepen-
dent influence on diatom distribution; however, only
TP remained an important variable when species
variation due to river reach, hydrology, and aquatic
plant cover was taken into account. The weak
influence of water quality on diatom distribution is
interpreted as reflecting the dichotomy between
plankton and non-plankton-dominated billabongs,
the influence of hydrology and biogeography, the
lack of strong spatial water quality gradients and the
high degree of temporal variability in water quality.
The findings show that diatom records from billabong
sediments can provide evidence of long-term changes
in the abundance of aquatic macrophytes and hydrol-
ogy. They also suggest that merging calibration data
sets across regions for the purpose of improving
diatom transfer functions for water quality recon-
struction is of limited value for floodplain lakes, and
that performance is more likely to be gained by
boosting site numbers within regions.
Keywords Billabongs � Rivers � Floodplains �Palaeolimnology
Introduction
Along with the other elements of river floodplain
systems in Australia, billabongs have been subject to
a range of anthropogenic stressors over the last
approximately 200 years, including clearance of
M. A. Reid (&)
Riverine Landscapes Research Lab, University
of Canberra, Canberra, ACT 2601, Australia
e-mail: [email protected]
R. W. Ogden
eWater Cooperative Research Centre, University
of Canberra, Canberra, ACT 2601, Australia
123
J Paleolimnol (2009) 41:453–470
DOI 10.1007/s10933-008-9236-0
native vegetation, pastoralism, invasive species, flow
regulation and water abstraction. There is little doubt
that these changes have impacted negatively river and
floodplain ecosystems; however, the precise causal
mechanisms and hence appropriate management
actions are not always clear because most changes
were initiated before detailed ecological studies of
these systems began (Reid and Ogden 2006). Palae-
olimnological studies provide one means for gaining
a greater understanding of both the nature of the pre-
European state of these systems as well as the causes
of post-European changes (Thoms et al. 1999; Reid
et al. 2002).
In the past there has been a perception that
sedimentary records from fluvial systems are unreli-
able, due to the dynamics of these environments and
the evidence from numerous studies that floodplain
lakes are relatively short-lived (Eckblad et al. 1977;
Cooper and McHenry 1989; Lewis and Lewin 1983;
Rang and Schouten 1989; Erskine et al. 1992).
However, in recent times there have been increased
efforts to apply palaeoecological approaches to
fluvial systems (e.g. Hay et al. 2000; Michelutti et al.
2001; Schonfelder et al. 2002; Gell et al. 2005a;
Wolfe et al. 2005, 2006). This trend has been
particularly strong in Australia where studies of
floodplain lake (billabong) sediments in the Murray
Basin have proven highly promising (Donnelly et al.
1999; Thoms et al. 1999; Ogden 2000; Gell et al.
2005a; Reid et al. 2007). In addition to providing
records of several thousand years duration (Ogden
et al. 2001), these studies have demonstrated dra-
matic and substantial changes to billabong
ecosystems associated with European settlement
(Ogden 2000; Reid 2002; Tibby et al. 2003; Reid
et al. 2007). In each system, the observed changes
occur over ca 1–2 cm of sediment depth, suggesting
that, despite their relative shallowness (mostly
\2 m), the sediments deposited in these environ-
ments maintain a high level of stratigraphic integrity.
The timing and ultimate causes of these changes
have not always been clear for two principal reasons:
first, the difficulties involved in obtaining reliable
sediment chronologies for the recent past (Gell et al.
2005a); and second, difficulties in interpreting the
proximate drivers of observed stratigraphic changes
due to our poor understanding of the ecology of
common taxa (Reid 2002; Tibby et al. 2003; Leahy
et al. 2005) and of the taphonomic processes leading
to their incorporation in sediment records (Ogden
2000). The purpose of this paper is to address the
second of these issues by examining factors affecting
the current distribution and abundance of diatoms in
billabong sediments. Specifically, the study will
examine the influence of water quality variables such
as nutrients, pH, salinity, turbidity, as well as water
depth, aquatic plant cover, biogeography, local land-
use and hydrology, all of which have been suggested
as important proximate or ultimate drivers of eco-
system change in floodplain lakes in Australia
(Ogden 2000; Gell et al. 2005a, b; Reid et al.
2007). The implications of the results for interpreta-
tion of these and future palaeolimnological records
are discussed.
Methods
The billabong data set
The billabongs included in the study are situated
within the south-eastern portion of the Murray-
Darling Basin, one of the largest drainage systems
in Australia, covering an area of 1,058,800 km2,
roughly 14% of the Australian continent (Fig. 1). The
catchments of the parent rivers of the billabongs
included in the study extend to 2,200 m, the highest
point on the Australian continent. The billabongs
themselves are situated in the lowland reaches at
elevations from just below 300 m asl to around
100 m asl. Rainfall in the study region ranges from
around 750 mm/a at Corryong in the Murray uplands
to the east and Alexandra in the south, down to
444 mm/a at Mathoura in the western portion of the
study area (Fig. 1). Highest rainfall and runoff occur
during winter and spring, with spring discharge
substantially augmented, particularly in the Murray
River, by snowmelt from the high-altitude areas of
their catchments in the Southern Highlands. Although
the headwater regions remain largely forested, the
floodplains themselves have been cleared to varying
degrees for agriculture, mostly pastoralism, and now
consist of grassland and open Eucalyptus camaldul-
ensis and E. largiflorens woodland with isolated
patches of remnant floodplain forest and woodland,
usually in the more frequently flooded areas.
The data set consists of surface sediment diatom
samples and water quality data from 46 billabongs on
454 J Paleolimnol (2009) 41:453–470
123
the floodplains of the Murray (30 billabongs), Ovens
(8 billabongs), Kiewa (1 billabong) and Goulburn
(7 billabongs) rivers. A larger data set is created by
the inclusion of physical and chemical data from two
of the Goulburn River billabongs for two separate
monitoring periods and by repeat surface sediment
sampling of these billabongs during the second
monitoring period (Table 1).
Regulation of river flows to provide water for
summer irrigation in downstream areas is affected by
three large dams: Hume Dam on the Murray River,
Dartmouth Dam on the Mitta Mitta River (a tributary
of the Murray) and Eildon Dam on the Goulburn
River (Fig. 1). As a result, the billabongs of the
Murray River below Lake Hume and the Goulburn
River are subject to a regulated hydrological regime.
The effect of this regulation on the flooding regimes
for billabongs associated with these rivers varies. In
areas immediately downstream of the large impound-
ments, billabongs situated close to the mainstream
may receive river input more frequently during the
summer irrigation season as water levels are main-
tained to supply water to downstream irrigators
(Pressey 1986; Maheshwari et al. 1995). Further
away from the mainstream and further downstream
the effect is generally a reduction in flood frequency
as water extraction and flood mitigation take effect
(Pressey 1986; Maheshwari et al. 1995). The variable
Fig. 1 The study area
J Paleolimnol (2009) 41:453–470 455
123
Table 1 Physical features, sampling dates, river reaches and hydrological and farming intensity classes of billabongs included in the
data set
Billabong River/
ReachaMax.
area
(ha)
Max.
depth
(cm)
Min.
depth
(cm)
Mean
vegetation
cover
Hydrology Farming
intensity
Sediment
sampling
date
Survey
period
1 Murr1 3.0 193 97 4.2 Unregulated High 8/93 1/92–3/93
2 Murr1 2.9 136 45 4.3 Unregulated High 8/93 1/92–3/93
3 Murr1 1.3 102 30 4.5 Unregulated High 9/93 1/92–3/93
4 Murr1 7.9 168 51 3.2 Unregulated High 8/93 1/92–3/93
5 Murr1 5.8 242 100 2.3 Unregulated High 9/93 1/92–3/93
6 Murr1 1.5 471 414 2.6 Unregulated High 9/93 1/92–3/93
7 Murr1 0.01 235 94 1.9 Unregulated Low 8/93 1/92–3/93
7a Murr1 0.44 325 193 2.3 Unregulated Low 8/93 1/92–3/93
8 Murr1 0.01 300 101 3.6 Unregulated Low 8/93 1/92–3/93
9 Murr1 3.6 145 122 1.1 Unregulated High 8/93 1/92–3/93
10 Murr1 8 186 68 3.5 Unregulated High 9/93 1/92–3/93
11 Kiewa 1.6 139 78 3.3 Unregulated High 9/93 1/92–3/93
12 Murr2 8 336 50 1.0 Exposed Low 9/93 1/92–3/93
13 Murr2 2.9 199 94 1.9 Isolated High 9/93 1/92–3/93
14 Murr2 4.1 300 121 1.0 Exposed Low 9/93 1/92–3/93
15 Murr2 1.1 187 10 1.7 Isolated High 11/93 1/92–3/93
16 Murr2 7.8 573 191 1.2 Exposed High 9/93 1/92–3/93
17 Murr2 2 40 0 5.0 Isolated High 9/93 1/92–3/93
18 Murr2 1.8 131 0 2.3 Isolated High 9/93 1/92–3/93
19 Murr2 0.06 230 164 3.0 Exposed Low 8/93 1/92–3/93
20 Ovens 1.5 200 50 2.3 Unregulated High 11/93 1/92–3/93
21 Ovens 3.4 188 72 1.8 Unregulated Low 11/93 1/92–3/93
22 Ovens 0.63 210 123 4.2 Unregulated Low 11/93 1/92–3/93
23 Ovens 1.6 203 85 3.5 Unregulated Low 11/93 1/92–3/93
25 Ovens 1.3 153 69 1.8 Unregulated High 11/93 1/92–3/93
26 Ovens 2.8 186 84 1.0 Unregulated High 11/93 1/92–3/93
27 Ovens 3.1 151 71 1.5 Unregulated High 11/93 1/92–3/93
28 Ovens 1.7 167 28 1.2 Unregulated High 11/93 1/92–3/93
29 Murr3 14.6 105 10 4.0 Isolated High 8/93 1/92–3/93
29a Murr3 1.8 447 342 1.3 Isolated Low 8/93 1/92–3/93
30 Murr3 67 111 3 4.4 Isolated High 8/93 1/92–3/93
31 Murr3 2.2 118 9 3.9 Isolated Low 9/93 1/92–3/93
32 Murr3 4.8 362 161 1.1 Isolated Low 9/93 1/92–3/93
33 Murr3 2.9 233 148 1.4 Exposed Low 11/93 1/92–3/93
34 Murr3 2.2 243 99 1.6 Isolated Low 11/93 1/92–3/93
35 Murr3 5.8 487 323 1.0 Exposed Low 11/93 1/92–3/93
36 Murr3 0.6 208 96 1.0 Isolated High 11/93 1/92–3/93
37 Murr3 1.5 50 0 5.0 Isolated High 9/93 1/92–3/93
38 Murr3 5.4 314 122 1.0 Isolated Low 11/93 1/92–3/93
OR Goulb 1.5 300 180 4.0 Isolated High 5/92 5/91–7/92
T1 Goulb 2.8 470 405 2.0 Exposed High 5/92 5/91–7/92
T2 Goulb 1.2 280 150 3.0 Isolated High 5/92 5/91–7/92
456 J Paleolimnol (2009) 41:453–470
123
effects of river regulation on billabong hydrology is
summarised by classification of billabongs on these
regulated river reaches according to the scheme
applied by Pressey (1986) in that author’s inventory
of Murray floodplain wetlands below Lake Hume. In
this scheme, Pressey (1986) classed low-lying bill-
abongs that experience inflow from the mainstream
during the summer irrigation season as hydrological
class 2 billabongs. These billabongs experience more
frequent connection to the river as a result of
regulation and are termed ‘Exposed’ in this study
(Table 1). Billabongs at higher elevations that do not
receive inflow from summer irrigation releases were
classed by Pressey (1986) as hydrological class 3
billabongs and are termed ‘Isolated’ in this study
(Table 1). Because the frequency of medium-sized
floods has been reduced by river regulation (Mahesh-
wari et al. 1995), ‘Isolated’ billabongs now
experience less frequent connection than they did
prior to the onset of the regulated regime (Ogden
1996; Table 1). The Ovens, the Upper Murray and
Kiewa rivers are subject to largely unregulated flow,
although some extraction and inter-basin transfer of
water does occur (Crabb 1997). The billabongs on
these river reaches are classed as ‘Unregulated’
(Unreg; Table 1). Most of the billabongs included
in the study are affected to some degree by agricul-
tural activity, with cattle and sheep grazing being the
most widespread. However, there is variation in the
intensity of agricultural activity at the local scale,
enabling the billabongs to be classed as subject to
high or low intensity agricultural activity, depending
on whether they are situated within cleared grassland
areas or within remnant woodland or forest (Table 1;
Ogden 1996; Reid 1997).
Physical and chemical monitoring
Field sampling of the Goulburn billabongs was
carried out over the period from June 1991 until July
1992 at two-month intervals. Further sampling of two
of these billabongs was carried out monthly between
May 1993 and May 1994 to augment a palaeoeco-
logical study of these billabongs (Reid 1997).
Sampling of the Murray, Ovens and Kiewa River
billabongs was carried out at two-month intervals
over the period from January 1992 until March 1993.
In all cases, electrical conductivity (EC), pH and
water temperature were measured in the field using a
Hanna portable conductivity meter HI 8733 and a
Hanna portable pH meter HI 8424. Additional
chemical variables were measured in the laboratory
using water samples collected in the field. Turbidity
(NTU) was measured using a Hach Turbidimeter,
model 2100A. Total nitrogen (TN) and phosphorus
(TP) and major ions (Na+, Mg2+, Ca2+, K+, HCO3-,
Cl-, SO42-) were analysed at the Murray Darling
Freshwater Research Centre, EML (Chem) Pty. Ltd.
and the Water Studies Centre at Monash University.
Methods are outlined in Ogden (1996) and Reid
(1997).
The water depth of each billabong was measured
on each survey trip at the deepest point in the
billabong. Billabong area was estimated from aerial
photographs or from 1:25,000 topographic maps
(Ogden 1996; Reid 1997). Aquatic macrophyte cover
(Cover) at all but the Callemondah billabongs was
estimated visually using a class-based scale. Five
cover classes were applied: 0–5%, 5–25%, 25–50%,
50–75% and 75–100% (Ogden 1996). Cover at the
Callemondah billabongs was established through line
Table 1 continued
Billabong River/
ReachaMax.
area
(ha)
Max.
depth
(cm)
Min.
depth
(cm)
Mean
vegetation
cover
Hydrology Farming
intensity
Sediment
sampling
date
Survey
period
H Goulb 2.5 340 250 3.0 Isolated High 5/92 5/91–7/92
C1_1 Goulb 2.8 370 270 2.0 Isolated High 5/92 5/91–7/92
C2_1 Goulb 1.5 320 210 3.0 Isolated High 5/92 5/91–7/92
NC Goulb 0.7 200 90 1.0 Isolated High 5/92 5/91–7/92
C1_2 Goulb 2.8 393 310 2.2 Isolated High 5/94 5/93–5/94
C2_2 Goulb 1.5 348 273 2.8 Isolated High 5/94 5/93–5/94
a Murr1 = Murray River above Lake Hume; Murr2 = Murray River between Lake Hume and the Ovens River Junction;
Murr3 = Murray River below the Ovens River Junction
J Paleolimnol (2009) 41:453–470 457
123
intersect surveys and the same cover class scale was
then applied. Submerged, floating and emergent
macrophytes were included in the cover estimates.
Formal floristic surveys were not carried out, except
at the Callemondah billabongs; however, the com-
mon aquatic taxa throughout the system included
Myriophyllum spp. L., Potamogeton tricarinatus
A.Benn., Juncus ingens N.A.Wakef., Eleocharis
sphacelata R.Br., E. acuta R.Br. and Azolla pinnata
R.Br.
Surface sediment sampling
Surface sediments were sampled for diatom analysis
at the end of the 12-month sampling period used in
each sampling program described above. Samples
were taken from the deepest section of each billabong
using soft sediment corers designed to minimise
disturbance of surface sediment layers. The upper
1 cm of sediment was extruded and sectioned in the
field to minimise disturbance and maintain strati-
graphic integrity. If the surface layer was seen to have
been disturbed during the coring process, the material
was discarded and a new sample taken.
Preparation of samples for diatom analysis fol-
lowed the methods outlined in Battarbee (1986).
Identification and enumeration of diatoms was carried
out using an Olympus BH-2 with Nomarski differ-
ential interference contrast and standard taxonomic
references (Patrick and Reimer 1966, 1975; Germain
1981; Krammer and Lange-Bertalot 1986, 1988,
1991a, b). At least 300 diatom valves were counted
for each sample.
Data analysis
Water quality variables measured over the course of
the sampling period were summarised by the median,
mean, maximum and minimum values recorded
during the full sampling period (these are denoted
in the text by the subscripts ‘med’, ‘mean’, ‘max’ and
‘min’, respectively). Data were log 10 transformed
where necessary to overcome problems of skewness
and non-linear relationships between parameters such
as total nitrogen, total phosphorus, turbidity and
water depth. Relationships between water quality
variables were explored using Pearson correlations
and Principal Components Analysis based on median
values. Diatom species abundances are expressed as a
percentage of the total number of valves recorded in
each sample.
Similarity matrices were calculated for water
quality profiles and diatom species assemblages using
the PRIMER computer program (Version 6.1.5,
Primer-E 2006). In the case of the water quality
profiles, the matrix was based on Gower difference
measures calculated using median values. The Gower
measure was used because it includes an implicit
range standardisation, making it an appropriate
measure to apply to environmental data incorporating
a diverse array of variables, each with differing scales
(Belbin and McDonald 1993). For the diatom surface
sediment assemblages, the matrix was based on the
Bray–Curtis similarity measure, which has been
shown to be a robust measure of community-based
data (Faith et al. 1991). These matrices were used to
examine the influence of hydrology, farming inten-
sity, and river reach, using the classifications listed in
Table 1, on billabong water quality and diatom
species distributions using the Analysis of Similarity
(ANOSIM) procedure in PRIMER. This procedure
uses similarity matrices to test for differences
between predetermined groupings (i.e., the river
reach, farming intensity and hydrology classes listed
in Table 1) by comparing the average rank similar-
ities between samples from different groups with the
average rank similarities between samples from the
same groups (Clarke and Warwick 1994).
Relationships between diatom assemblages and
water quality gradients were investigated through
Canonical Correspondence Analysis (CCA) using the
Canoco computer package (Canoco for Windows
4.54 2006). Forward selection was applied to deter-
mine which variables, including median, mean,
maximum and minimum values for each variable,
made a significant contribution (p \ 0.05) to explain-
ing variance in the species data, as tested using a
Monte Carlo permutation test (999 permutations).
Relationships between diatom assemblages and non-
water quality variables (billabong depth, aquatic
vegetation cover, hydrology, river reach and farming
intensity) were also investigated using CCA, again
with forward selection applied. In this instance
hydrology, river reach and farming were represented
as nominal variables in the CCA. Variance partition-
ing (Borcard et al. 1992) was used to investigate the
effects of interactions between the significant envi-
ronmental variables on the diatom assemblage
458 J Paleolimnol (2009) 41:453–470
123
distributions. In order to investigate the effects of
environmental variables exclusive of biogeographic
effects, CCA was also carried out separately on
subsets of billabongs from each of the river reaches
that were shown in ANOSIM to be characterised by
distinct diatom assemblages. Finally, the significance
of differences in the abundance of key diatom taxa
(identified through multivariate analyses) in selected
billabong groupings are tested using analysis of
variance (using SPSS v14.0).
Results
The physical and chemical character of billabongs
Billabongs included in the study were generally small
and shallow. The largest billabong included in the
study has a surface area of 67 ha, while the greatest
depth recorded was 5.72 m. However, the majority of
billabongs are less than 5 ha in maximum extent (41
of 52), with maximum depths of less than 4 m (47).
The mean depth for all billabongs was 177 cm. Depth
ranges for individual billabongs over the course of
sampling were generally around 1 m (Fig. 2), with
the maximum range being 3.82 m.
Water quality data collected from the 48 billabongs
are summarised in the box plots displayed in Fig. 2. As
for water depth, temporal variability in billabong
water chemistry was relatively high (Fig. 2).
The billabongs were moderately to highly turbid,
with individual readings ranging from 1 NTU to 260
at Billabong 38. A strong negative correlation
between turbidity (NTU) and billabong depth (Depth)
is evident (Table 2), suggesting that re-suspension of
surface sediments through wind-generated turbulence
was an important contributor to high turbidity.
Billabong median annual pH ranged from 6.12 to
7.99. The pH appears to reflect the concentration of
base cations in billabong waters, there being a signif-
icant correlation between pH and EC (p = 0.003)
(Table 2). The billabongs in the data set can be classed
as fresh, with median annual EC ranging from
47 ls cm-1 to 400 ls cm-1 (Fig. 2).
The billabongs in the data set ranged from meso to
hypereutrophic, with annual median TP ranging from
10.001.000.100.01100.0010.001.000.100.013002001500.0
383736
3433323130
29a29282726B
illab
on
g
2524232221201918171615141312111098
7a7654321
6420 40302010 10.008.006.00 1,9001,5001,100700300
C1_1
C1_2
C2_1
C2_2
H
NC
T2T1
OR
Depth (m)
Electricalconductivity(µS cm-1) TN (mg-1) TP (mg-1)
Murray 1
Kiewa
Murray 2
Ovens
Murray 3
Goulburn
Water temp (°C) pHTurbidity (NTU)
Fig. 2 Box plots summarising within-billabong range in recorded depth and water quality
J Paleolimnol (2009) 41:453–470 459
123
42 lg l-1 to 990 lg l-1 and TN concentrations
ranging from 0.110 mg l-1 to 4.00 mg l-1. Once
again, the range of within-billabong nutrient concen-
trations was often high. TP correlates strongly with
NTU and Depth (Table 2). Accordingly, shallow
billabongs were characterised by high TP concentra-
tions and high turbidity. Vegetation cover was also
negatively correlated with NTU (Table 2).
The first axis of the PCA carried out on billabong
physical and chemical character reflects variation in
depth, turbidity and TP concentrations, which are all
strongly correlated (Fig. 3). Thus, billabongs scoring
higher on this axis are characterised by greater depth
and water clarity and lower TP concentrations
(Fig. 3). The second axis in the PCA reflects variation
in EC and pH, with billabongs scoring highest on this
axis being characterised by higher values in both
these variables (Fig. 3).
Spatial patterns in billabong water quality
Analysis of Similarity (ANOSIM) carried out on
water quality data shows that only the billabongs of
the Goulburn River, which were characterised by
greater water depth, higher EC and pH and lower
turbidity, are clearly separated from the billabongs
of the remaining reaches (Figs. 3, 4a). There is no
separation of billabongs by hydrological regime
(Fig. 4b); however, when the comparison was
restricted to only Murray 2 billabongs—the single
reach where the hydrological distinction between the
Exposed and Isolated classes is greatest (Maheshwari
et al. 1995)—the difference between these classes
was clear (Global R = 0.844). There was no
significant difference in the water quality of bill-
abongs according to farming intensity on surrounding
land (Global R = -0.033).
Surface sediment diatom assemblages
A total of 306 taxa were identified, although most of
these were very rare, and only those present in
abundances in excess of 5% in a single sample or
greater than 1% in at least four samples (a total of 92
taxa), are considered here and included in the
statistical analyses. The relative abundances of the
more common taxa are indicated in Fig. 5.
The majority of species identified were attached
or motile, benthic species and the majority of
samples were dominated by diatoms that character-
istically display these life habits. The most common
of these include the attached taxa Achnanthidium
minutissimum (Kutz.) Czarnecki and Gomphonema
parvulum Kutzing and the motile benthic spe-
cies Navicula cryptocephala Kutzing. Of these,
A. minutissimum was markedly more abundant
in the non-plankton-dominated billabongs of the
Goulburn, Ovens and Murray 1 river reach flood-
plains. G. parvulum and N. cryptocephala were
more evenly distributed, but were most common in
the billabongs of the Ovens and the Murray 3
(G. parvulum) and the Goulburn River and Murray 1
reach (N. cryptocephala). Cocconeis placentula
Ehrenberg was common in some Goulburn River
billabongs, but was not abundant in the billabongs
of the remaining reaches.
Plankton-dominated assemblages were largely
restricted to billabongs of the Murray River
Table 2 Matrix of Pearson correlation coefficients
Veg covermean Tempmed Depthmed ECmed NTUmed TNmed TPmed pHmed
Veg covermean -0.133 -0.100 0.087 -0.291 0.063 -0.034 -0.144
Tempmed 0.366 0.027 -0.183 0.162 -0.196 0.084 0.081
Depthmed 0.499 0.852 0.025 -0.437 0.247 -0.636 0.354
ECmed 0.558 0.194 0.860 -0.174 0.593 0.122 0.410
NTUmed 0.044 0.252 0.001 0.216 -0.352 0.613 -0.023
TNmed 0.670 0.163 0.077 0.000 0.010 -0.180 0.243
TPmed 0.819 0.553 0.000 0.387 0.000 0.202 -0.062
pHmed 0.328 0.566 0.010 0.003 0.869 0.082 0.661
Correlation coefficients (r) are given above the diagonal cells, p-values are given below, p-values\0.05 are in bold. The variables
NTU, TN and TP were Log 10-transformed before calculating correlations
460 J Paleolimnol (2009) 41:453–470
123
downstream of Lake Hume (Murray 2 and Murray 3).
Aulacoseira subborealis (Nygaard) Denys, Muylaert
& Krammer and Aulacoseira granulata (Ehr.)
Simonsen were the most abundant planktonic diatom
taxa at these sites. The abundance of A. granulata
was highly variable, particularly in the billabongs of
the Murray 2 reach, while the abundance of
Aulacoseira subborealis was more consistent across
Murray 2 and Murray 3 reaches (Fig. 5). Stephan-
odiscus parvus Stoermer & Hakansson, Cyclotella
pseudostelligera and Cyclostephanos tholiformis
Stoermer & Hakansson were occasionally abundant
in Murray billabongs. Aulacoseira crenulata
(Ehrenberg) Thwaites was relatively common in
the sediments of Murray 1 and Ovens billabongs
(Fig. 5).
Spatial patterns in diatom surface sediment
assemblages
Billabong diatom assemblages clearly differed
between most reaches, with only the Murray 1 and
Ovens reaches and the Murray 2 and Murray 3 reaches
returning R-values substantially below 0.5 (Fig. 4a).
On this basis, three distinct reach groupings of
billabongs with regard to diatom assemblages can be
established—the Murray 2 and Murray 3 billabongs,
which were dominated by the two planktonic taxa
Aulacoseira granulata and A. subborealis (Fig. 5), the
combined Murray 1 and Ovens billabongs, which were
dominated by the benthic and epipelic taxa Achnan-
thidium minutissimum, Gomphonema parvulum and
Navicula cryptocephala, and the Goulburn billabongs,
0.1-1.0
water temp
water depth
NTU
pH
EC
TN
TP
veg cover
Environmental variables
River reaches
Murray 1
Murray 2
Murray 3KiewaOvens
Goulburn
Hydrological classUnregulated
Isolated
Exposed
Environmental variables
0.10.1-
water temp
water depth
NTU
pH
EC
TN
TP
veg cover
-1.0
1.0
-1.0
1.0
(a) (b)
Fig. 3 Biplots of environmental variables and sample scores from PCA of billabong water chemistry. Samples classed by reach
(a) and hydrology (b)
J Paleolimnol (2009) 41:453–470 461
123
which were dominated by Achnanthidium minutissi-
mum, Navicula cryptocephala and Cocconeis
placentula (Fig. 5).
Billabong diatom assemblages also differed
between Exposed and Unregulated billabong classes
(Fig. 4b). This difference is driven by the dominance
of Aulacoseira granulata and, to a lesser degree,
A. subborealis in Exposed billabongs. The diatom
assemblages of the two regulated classes were not
clearly separated; however, as for the water quality
data, when the analysis was restricted to the Murray 2
reach only, the two groups were clearly separated
(Global R = 0.771). This distinction can be largely
attributed to differences in the abundance of
A. granulata in Exposed billabongs. ANOVA, com-
paring the abundance of A. granulata in Exposed and
Isolated billabongs of Murray 2 and Murray 3
reaches, shows that A. granulata was more abundant
in Exposed billabongs (F = 6.32, p = 0.02). This
effect was stronger for Murray 2 reach, although the
interaction was not significant and there was also no
difference in the abundance of A. granulata across
reaches (Fig. 6a). No significant effects were detected
when the same analysis was carried out on Aula-
coseira subborealis, the other dominant diatom
species in these reaches (F = 0.429, p = 0.519)
(Fig. 6b). The diatom assemblages of billabongs
subject to high intensity farming and those of
billabongs subject to low intensity farming were not
clearly separated (R = 0.114).
Influence of environmental variables on diatom
assemblages
Forward selection of water quality variables showed
that just three made significant, independent contribu-
tions to explaining variation in the diatom assemblage
data. These were, in order of selection, TNmean, pHmin
and TPmed. In combination, these three variables
explain 15.3% of the variation in the species data.
For the non-water quality variables, four made signif-
icant, independent contributions to explaining species
variance. In order of selection, these variables were
‘Goulburn’ and ‘Unregulated’, vegetation covermin
and ‘Ovens’. In combination these four variables
explain 25.7% of the variation in the species data. With
Water quality
Diatom assemblages
0.00.10.20.30.40.50.60.70.80.91.0
Murray 2Murray 3OvensGoulburn
Murray 1
Murray 2
Murray 3
Ovens
0.00.10.20.30.40.50.60.70.80.91.00.00.10.20.30.40.50.60.70.80.91.00.00.10.20.30.40.50.60.70.80.91.0
Isolated0.0
0.00.10.20.30.40.50.60.70.80.91.0
Exposed
Exposed
Unregulated
0.10.20.30.40.50.60.70.80.91.0
(a)
(b)
Fig. 4 R statistics for pair-
wise comparisons of reach
(a) and hydrological (b)
classifications of billabongs
characterised by physical
and chemical variables and
by diatom assemblages. Rvalues in excess of 0.75
suggest groups are well
separated, values greater
than 0.5 suggest some
overlap, but a clear
difference between groups,
while values less the 0.25
indicate little or no
separation of groups
(Clarke and Warwick 1994)
462 J Paleolimnol (2009) 41:453–470
123
the three water quality and four non-water quality
variables included in CCA, the total species variance
explained increases to 32.4%; however, forward selec-
tion of these seven variables shows that TNmean and
pHmin, which were selected 6th and 7th, respectively,
did not explain a significantly greater amount of species
variation (Table 3). A plot of the CCA ordination using
all seven variables is presented in Fig. 7.
Variance partitioning confirmed the greater
explanatory power of the non-water quality variables,
showing that TNmean, TPmed and pHmin explain only
6.8% of species variation after variation attributable
to ‘Goulburn’, ‘Unregulated’, ‘Ovens’ and vegetation
covermin is removed. In contrast, ‘Goulburn’, ‘Unreg-
ulated’, ‘Ovens’ and vegetation covermin explain
17.1% of the species variation after variance attrib-
utable to TNmean, TPmed and pHmin is removed.
CCA was repeated separately for each of the river
reach groupings that were shown in ANOSIM to be
characterised by distinct diatom assemblages.
1 2 3 4 5 6 77a
89
10 11 12 13 14 15 16 17 18 19 20 21 22 23 25 26 27 28 29
29a 30 31 32 33 34 35 36 3738
ORT1 T2 H
C1_1C2_1
NCC1_2
C2_2
Murray 1
Kiewa
Murray 2
Ovens
Murray 3
Goulburn
0 0 0 0 0 0 0 0 00 0 0
Plankton Facultative plankton Attached Motile benthicB
illab
on
g
20 20 0 20 0 20 400 200 20 40 60 80 200 20 0 0 0 0 020 20 20 20 20 20 20 2040400
Fig. 5 Relative abundances of common diatom taxa found in the billabong data set. Billabongs are arranged broadly upstream to
downstream
J Paleolimnol (2009) 41:453–470 463
123
Forward selection in these analyses showed the
influence of water quality variables to be substan-
tially greater than for the combined data set
(Tables 4–6). In the case of billabongs on the Murray
1, Kiewa and Ovens reaches, the variables TPmin,
pHmed and farming intensity explain 20.12% of the
species variation (Table 4). For the Goulburn bill-
abongs, TPmed, ‘Isolated’, Depthmax and TNmax
explain 58.37% (Table 5), while for the Murray 2
and 3 reaches, TPmed, Vegetation covermin, ECmed,
ECmax, farming intensity and Temperaturemed explain
56.93% of the variation (Table 6).
Discussion
The results of this study indicate that the influence
of water quality variables such as pH, EC, turbidity
and nutrient concentrations on the distribution of
diatom taxa in billabongs across the study area is
relatively small when compared to the influence of
river reach, hydrology and habitat availability (i.e.
whether a billabong is macrophyte or phytoplankton-
0
5
10
15
20
25
30
35
Murray 2 Murray 3 Murray 2 Murray 3
Exposed Isolated
0
10
20
30
40
50
60
Murray 2 Murray 3 Murray 2 Murray 3
Exposed Isolated
(a)
(b)
Fig. 6 Estimated marginal means for Aulacoseira granulata(a) and A. subborealis (b) by river reach (Murray 1 and 2) and
hydrological class (Exposed and Isolated)
Table 3 Results of forward selection in CCA using all sites
Variable k - 1 Variance explained F p
Goulburn 0.259 8.62
Unregulated 0.2239 7.45
TNmean 0.2084 6.94
Vegmin 0.1505 5.01
pHmin 0.1455 4.84
TPmed 0.1334 4.44
Ovens 0.1244 4.14
k - A
Goulburn 0.259 8.62 4.34 0.002
Unregulated 0.3121 10.39 5.77 0.002
TPmed 0.1105 3.68 2.09 0.026
Vegmin 0.1093 3.64 2.12 0.002
Ovens 0.0923 3.07 1.83 0.044
TNmean 0.0506 1.68 1 0.398
pHmin 0.0404 1.34 0.8 0.6
Total 0.947 31.51
The marginal and conditional effects of the significant water
quality (3) and non-water quality (4) variables are shown. The
canonical eigenvalue of each variable, k - 1, indicates the
amount of species variance potentially explained by that
variable alone (the marginal effect). The k - A value indicates
the increase in the sum of all canonical eigenvalues of the
ordination when that variable is added sequentially (the
conditional effect). At each iteration, the variable explaining
the greatest amount of species variance (highest k - A) is
added. F and p values are based on Monte Carlo permutation
tests with 499 permutations and indicate whether the variables
add a significant amount to variance explained
464 J Paleolimnol (2009) 41:453–470
123
dominated). This result contrasts with most studies of
diatom distributions in Australia and elsewhere that
suggest water chemistry exerts the greatest control
over distributions and that biogeographic influences
are relatively minor for these organisms (e.g. Birks
et al. 1990; Dixit et al. 1992; Bennion et al. 1996;
Gell 1997; Tibby and Reid 2004); however, they are
largely consistent with the findings of Hay et al.
(2000), which also highlighted the influence of
hydrology and macrophyte abundance on diatom
assemblages in floodplain lakes of the Mackenzie
Delta in the Northwest Territories, Canada.
Diatom habitat grouping
Planktonic taxa
Attached taxaMotile benthic taxa
Environmental variables
Nominal Environmental variables
0.10.1-
TPmedUnregulated
Ovens
Veg covermin
GoulburnpH min
TNmean
0.10.1-
River reaches
Murray 1
Murray 2
Murray 3KiewaOvens
Goulburn
Nominal Environmental variables
Environmental variables
TPmed
UnregulatedOvensVeg covermin
Goulburn
pHmin
TNmean
0. 1-0. 1
0. 1-0. 1
(a) (b)
Fig. 7 Biplot of seven environmental variables and sample (a) and species scores (b) on axes 1 & 2 from CCA ordination using the
50-sample billabong data set. Scaling focused on inter-species distances
Table 4 Results of forward selection in CCA using Murray 1,
Ovens and Kiewa billabongs only (all unregulated sites)
Variable k - 1 Variance explained F p
TPmin 0.2928 11.35
pHmed 0.2635 10.21
k - A
TPmin 0.2928 11.35 2.3 0.028
pHmed 0.2259 8.76 1.86 0.022
Total 0.519 20.11
See Table 3 header for explanation of the forward selection
process and derived values
J Paleolimnol (2009) 41:453–470 465
123
Studies that have shown a predominant influence
of water chemistry on diatom distributions support
the notion that improved characterisation of diatom
optima and tolerances can be best achieved through
creation of large regional data sets that maximise the
length of the gradient of interest and minimise bias in
sampling across the gradient (Gasse et al. 1995;
Bennion et al. 1996). The assumption underlying this
view is that the cosmopolitan nature of diatom
distributions reduces the capacity of biogeographic
factors to introduce noise into observed distribution
patterns. The results of this study suggest that, for
these billabongs at least, this assumption does not
hold and that individual river reaches have distinct
diatom floras associated with them.
Reach-scale spatial patterns are evident in the water
quality of billabongs included in this survey. However,
these patterns are not strong and only the Goulburn
River billabongs, with generally higher EC and pH and
lower TP, clearly differ from the remaining bill-
abongs. This seems to be largely a reflection of the
local geology in the vicinity of the Goulburn bill-
abongs which includes Devonian marine sediments
incorporating limestone (Reid 1997). Similarly,
although the ‘Exposed’ billabongs form a tight
grouping (Fig. 3b), neither this nor the other hydro-
logical groupings have clearly different water quality.
The lack of strong spatial patterns in water quality may
have been influenced by the fact that the surveys of
most billabongs were conducted during a year when
rainfall was 60% above average (Ogden 1996).
Flooding occurred during the year that the billabongs
were sampled and it is possible that differences
between ‘Exposed’ and ‘Isolated’ billabongs, for
example, would have been more marked if no flooding
had occurred. However, the flooding that occurred
during the sampling period cannot account for the lack
of separation between billabongs on reaches that are
not hydrologically connected such as the Ovens and
Murray 1 reaches and the Ovens and Murray 2 reaches
(Fig. 4a). Thus, the general pattern that emerges is that
the location of a billabong, be it at a regional or local
scale, does not appear to exert a strong influence over
the water chemistry as recorded in this study.
In contrast to the relatively weak spatial patterns in
billabong water quality, the spatial patterns in diatom
assemblages are strong. A fundamental distinction
can be made between billabongs that are dominated
by planktonic diatoms (predominantly Murray 2 and
Murray 3 billabongs) and those dominated by
attached and benthic taxa (predominantly billabongs
located on the remaining river reaches). Previous
studies of the distribution of cladoceran remains in
most of the billabongs included in this data set also
showed strong distinctions between billabongs with
assemblages dominated by planktonic taxa and those
dominated by plant-associated taxa (Ogden 2000).
This pattern was attributed to feedback mechanisms
acting to maintain planktonic dominance and limit
growth of submerged plants in large, relatively deep
Table 5 Results of forward selection in CCA using Goulburn
billabongs only
Variable k - 1 Variance explained F p
TPmed 0.3699 25.49
Depthmax 0.2976 20.51
Isolated 0.1885 12.99
k - A
TPmed 0.3699 25.49 2.4 0.01
Isolated 0.2201 15.17 1.53 0.046
Depthmax 0.257 17.71 2.13 0.024
Total 0.847 58.37
See Table 3 header for explanation of the forward selection
process and derived values
Table 6 Results of forward selection in CCA using Murray 2
and 3 billabongs only
Variable k - 1 Variance explained F p
TPmed 0.2178 20.00
Veg covermin 0.1575 14.46
ECmed 0.1591 14.61
ECmax 0.182 16.71
High farm 0.1843 16.92
Tempmed 0.0842 7.73
k - A
TPmed 0.2178 20.00 4.25 0.002
Veg covermin 0.1014 9.31 2.11 0.002
ECmed 0.0813 7.47 1.77 0.022
ECmax 0.0752 6.91 1.72 0.04
High farm 0.0731 6.71 1.76 0.032
Tempmed 0.071 6.52 1.81 0.024
Total 0.62 56.93
See Table 3 header for explanation of the forward selection
process and derived values
466 J Paleolimnol (2009) 41:453–470
123
billabongs, in accordance with the theory of alterna-
tive stable states (Scheffer et al. 1993; Ogden 2000).
According to the theory of alternative stable states,
a clear-water, macrophyte-dominated state will per-
sist in shallow lakes under low nutrient conditions
and a turbid, phytoplankton-dominated state will
persist under high nutrient concentrations; however,
either state can persist at intermediate nutrient
concentrations as a result of feedback processes that
act to maintain competitive dominance of macro-
phytes or phytoplankton (Scheffer et al. 1993, 2001).
Billabongs are shallow lakes and, assuming they are
subject to alternative stable states, very different
diatom floras would be expected to occur in macro-
phyte-rich and macrophyte-poor billabongs even in
the absence of strong differences in water quality,
except in relation to light.
By repeating CCA separately on the distinct groups
of billabongs (Tables 4–6), the more subtle species
responses to environmental gradients are drawn out. In
this respect, the results of this study support the
findings of a recent study carried out on stream and
river diatoms in SE Australia that found strong regional
differences in diatom communities between those of
upland and lowland areas. Philibert et al. (2006) also
found that even within these broad groupings, geospa-
tial variables such as altitude, latitude and longitude
remained important predictors of diatom distributions.
Importantly, however, Philibert et al. (2006) inter-
preted the importance of these geospatial variables as
an artefact of covariance with water quality vari-
ables—for example the strong east–west climatic and
salinity gradients that exist in south east Australia.
While such covariance is likely to have some impor-
tance in the case of billabong diatom assemblages—
particularly with regard to the Goulburn billabongs—it
appears that hydrology, billabong morphometry and
biogeographic effects associated with reach-scale
population dynamics are more important.
A further contrast with the results from the
Philibert et al. (2006) study is that diatom distribu-
tions in the billabongs in this data set appear to be
more strongly influenced by TP than pH, EC and TN.
TP was consistently shown to exert the strongest
influence on diatom distribution within the reach
groupings (Tables 4–6), supporting the notion that
the apparent influence of pH and TN on diatom
distributions in the full data set (Table 3) was due to
the confounding of these variables with reach groups.
A further factor that may have contributed to weak
water quality–species relationships in the full data set
is the low level of spatial, relative to temporal,
variability in the water quality data. Low spatial
variability means that the environmental gradients
incorporated in the data set are short (Fig. 2) and this
will result in less species turnover (Bennion et al.
1996). On the other hand, high temporal variability
ensures that diatom assemblages are dominated by
tolerant taxa and/or a mixture of taxa with a broad
range in optima (Gell 1997). In combination, these
effects will limit the strength of species–environment
relationships. It is also possible that the combination
of high temporal and low spatial variability in water
quality has contributed to the relatively strong
geographical distinctions in billabong diatom assem-
blages. High temporal variability in water quality
means that conditions within individual billabongs
are likely to become periodically unsuitable for
specific taxa. Under these conditions, the abundance
of taxa within individual billabongs may be more
strongly influenced by the close proximity and
sporadic hydrological connection to re-colonisation
sources (i.e. nearby billabongs and the river) than by
the absolute optima of competing taxa. In this way,
subtle differences in the water quality of billabongs
within certain reaches may be magnified to create
quite distinct diatom assemblages.
ANOVAs carried out on the dominant species
within the Murray 2 and 3 reaches suggest that the
abundance of Aulacoseira granulata is influenced by
whether or not the billabong experiences regular
connection to the mainstream, particularly within the
Murray 2 reach. Given that A. granulata is the
dominant planktonic alga in the Murray River below
Lake Hume (Sullivan et al. 1988; Hotzel 1997), it is
likely that this distinction reflects, at least in part, the
direct input of this species from the river. Influx of
riverine diatoms to floodplain lakes through hydro-
logical connection was also observed by Hay et al.
(2000) in the Mackenzie River Delta, and by Van den
Brink et al. (1994) on the Rhine and Meuse Rivers.
Aulacoseira granulata has a relatively high sinking
rate and thus requires high turbulence to maintain
position in the water column (Lund 1964; Kilham
et al. 1986; Reynolds 1988). Studies of Murray River
potamoplankton show that A. granulata is less
abundant where turbulence is reduced, presumably
as a result of settling (Hotzel and Croome 1996;
J Paleolimnol (2009) 41:453–470 467
123
Bormans and Webster 1999). Thus, the reduced
abundance of A. granulata in the isolated billabongs
of Murray 2 and Murray 3 reaches may reflect
reduced riverine input and its competitive disadvan-
tage under conditions where turbulence is low.
Although connection to the main channel may be
the most parsimonious explanation for the contrasting
abundances of A. granulata in ‘Exposed’ and
‘Isolated’ billabongs, it remains possible that other
factors such as water quality or depth may be
important. Further studies are required to test these
relationships, for example, through the use of sedi-
ment traps and direct sampling of plankton
communities in ‘Exposed’ and ‘Isolated’ billabongs
as well as in the river itself over a time series that
incorporates periods when ‘Exposed’ billabongs are
both disconnected and connected to the main channel.
At this stage, however, with the evidence at hand, it
seems likely that the sediments of ‘Exposed’ bill-
abongs preserve elements of the mainstream diatom
flora and so could provide a record of hydrological
change (Hay et al. 2000; Michelutti et al. 2001) as
well as changes to the broader river ecosystem.
Conclusions and implications for
palaeolimnological study
Although the results of this study indicate that pH,
TN and TP are the most important water quality
variables controlling diatom distribution in bill-
abongs, the influence of pH and TN on diatom
distribution appears to be secondary to whether or not
a billabong is phytoplankton- or macrophyte-domi-
nated or the river reach on which the billabong is
located. The dichotomy between phytoplankton and
macrophyte dominance means that billabongs of
similar water quality can support very different
diatom assemblages and hence a relatively small
proportion of the variation in species assemblages can
be attributed to water quality gradients. A high degree
of temporal relative to spatial variability in the
physical and chemical character of individual bill-
abongs is also likely to contribute to the relatively
weak species responses to water quality gradients.
Distinctions between the assemblages of billabongs
of different rivers and river reaches suggest that
distribution is also confounded by hydrological and
biogeographic factors.
This study has provided a broad picture of the
environmental variables, mechanisms and processes
that drive the distribution of diatoms in billabongs
within the study region. Many uncertainties remain,
largely as a result of confounding effects that are
inherent in the use of species distributions to inform
on species preferences. Nevertheless, the information
gained from this study will allow for these uncer-
tainties to be addressed through more focused
distributional and experimental studies.
These patterns have several important implications
for palaeolimnological studies. First, diatom-based
transfer functions have been established for pH and
EC using data from the region (Tibby et al. 2003,
2007; Tibby and Reid 2004; Philibert et al. 2006), the
results of this study indicate that there may also be
scope to develop a transfer function for reconstruct-
ing TP. Second, there may be value in developing
separate transfer functions for phytoplankton- and
macrophyte-dominated billabongs and for billabongs
on different reaches. By separating phytoplankton-
and macrophyte-dominated billabongs and different
reaches, important sources of confounding in relation
to habitat and biogeography can be eliminated. It is
possible that these effects are of particular impor-
tance in floodplain lakes (e.g. Hay et al. 2000;
Michelutti et al. 2001) because of the episodic
hydrological connections that occur across water
bodies of the same river reaches due to flooding. This
issue needs to be further examined through spatially
explicit hierarchical sampling of billabongs to iden-
tify the spatial scale at which the various potential
drivers of diatom distributions (water quality, mor-
phometry, population dynamics and hydrology)
operate. Finally, the distribution of diatoms in
billabongs of the lower Murray reaches suggests that
key elements of the river flora appear to be preserved
in billabong sediments. This greatly enhances the
scope of reconstructions. The Murray River supports
a large phytoplankton population (dominated by the
diatom Aulacoseira granulata) that accounts for up to
84% of the primary productivity of the river (Gawne
et al. 2007). Evidence that this phytoplankton assem-
blage is reflected in billabong sediments raises the
possibility that changes in this community may be
tracked through time. The rivers of the Murray-
Darling system are widely held to have undergone
profound ecological change as a result of changing
land use and river regulation. However, much of the
468 J Paleolimnol (2009) 41:453–470
123
evidence for change is either anecdotal or suffers
from a disturbing lack of temporal perspective
(Thoms et al. 1999; Reid and Ogden 2006). The
possibility that palaeolimnological approaches could
offer empirical evidence of change within river
systems extending over centuries is one that is well
worth pursuing.
Acknowledgements This research was supported by
Australian Post-Graduate Research Awards provided to the
authors, and by a research grant from the Murray-Darling
Freshwater Research Centre. The School of Geography and
Environmental Science, Monash University and the Department
of Biogeography and Geomorphology, Australian National
University provided field and lab support. The authors also
thank the many landholders who allowed access to the billabongs
on their properties, Damien Smith for tireless field assistance,
Gerry Quinn for valuable statistical advice, and finally, Peter
Kershaw and John Tibby for their helpful comments on earlier
drafts.
References
Battarbee RW (1986) Diatom analysis. In: Berglund BE (ed)
Handbook of holocene palaeoecology and palaeohydrol-
ogy. Wiley, Chichester, pp 527–568
Belbin L, McDonald C (1993) Comparing three classification
strategies for use in ecology. J Veg Sci 4:341–348
Bennion H, Juggins S, Anderson NJ (1996) Predicting epi-
limnetic phosphorus concentrations using an improved
diatom-based transfer function and its application to lake
eutrophication management. Environ Sci Technol
30:2004–2007
Birks HJB, Line JM, Juggins S, Stevenson AC, ter Braak CJF
(1990) Diatoms and pH reconstruction. Philos Trans R
Soc Lond B Biol Sci 327:263–278
Borcard D, Legendre M, Drapeau P (1992) Partialling out the
spatial component of ecological variation. Ecology
73:1045–1055
Bormans M, Webster IT (1999) Modelling the spatial and
temporal variability of diatoms in the River Murray. J
Plankton Res 21:581–598
Clarke KR, Warwick RM (1994) Change in marine commu-
nities: an approach to statistical analysis and
interpretation. National Environment Research Council,
Plymouth, pp 1–144
Cooper CM, McHenry JR (1989) Sediment accumulation and
its effects on a Mississippi River oxbow lake. Environ
Geol 3:33–37
Crabb P (1997) Murray-Darling basin resources. Murray-
Darling Basin Commission, Canberra, pp 1–300
Dixit SS, Smol JP, Kingston JC, Charles DF (1992) Diatoms:
powerful indicators of environmental change. Environ Sci
Technol 26:23–33
Donnelly TH, Ford PW, McGregor D, Allen D (1999)
Anthropogenic changes to a billabong in New South
Wales. 1. Lagoon evolution and phosphorus dynamics.
Mar Freshw Res 50:689–698
Eckblad JW, Peterson NL, Ostlie K (1977) The morphometry,
benthos and sedimentation rates of a floodplain lake in
Pool 9 of the Upper Mississippi River. Am Midl Nat
97:433–443
Erskine W, McFadden C, Bishop P (1992) Alluvial cutoffs as
indicators of former channel conditions. Earth Surf Pro-
cess Landforms 17:23–37
Faith DP, Humphrey CL, Dostine PL (1991) Statistical power
and BACI designs in biological monitoring: comparative
evaluation of measures of community dissimilarity based
on benthic macroinvertebrate communities in Rockhole
Mine Creek, Northern Territory, Australia. Aust J Mar
Freshw Res 42:589–602
Gasse F, Juggins S, Ben Khelifa L (1995) Diatom-based
transfer functions for inferring past hydrochemical char-
acteristics of African lakes. Palaeogeogr Palaeoclimatol
Palaeoecol 117:31–54
Gawne B, Merrick C, Williams DG, Rees G, Oliver R, Bowen
T, Treadwell S, Beattie G, Ellis I, Frankenberg J, Lorzen
Z (2007) Patterns of primary and heterotrophic produc-
tivity in an arid lowland river. River Res Appl 23:1070–
1087
Gell PA (1997) The development of a diatom database for
inferring lake salinity, Western Victoria, Australia:
towards a quantitative approach for reconstructing past
climates. Aust J Bot 45:389–423
Gell P, Tibby J, Fluin J, Leahy P, Reid M, Adamson K, Bulpin
S, MacGregor A, Wallbrink P, Hancock G, Walsh B
(2005a) Accessing limnological change and variability
using fossil diatom assemblages, south-east Australia.
River Res Appl 21:257–269
Gell PA, Bulpin S, Wallbrink P, Hancock G, Bickford S
(2005b) Tareena Billabong – a palaeolimnological history
of an ever-changing wetland, Chowilla Floodplain, lower
Murray-Darling basin, Australia. Mar Freshw Res
56:441–456
Germain H (1981) Flores des diatomees eaux douces et
saumatres. Societe Nouvelle des Editions Boubee, Paris,
pp 1–444
Hay MB, Michelutti N, Smol JP (2000) Ecological patterns of
diatom assemblages from Mackenzie Delta lakes, North-
west Territories, Canada. Can J Bot 78:19–33
Hotzel G (1997) Long-term observations on the phytoplankton
in a large river (River Murray, Australia). Phycologia
36:41–41
Hotzel G, Croome R (1996) Population dynamics of Aulacoseira
granulata (EHR.) SIMONSON (Bacillariophyceae, Cent-
rales), the dominant alga in the Murray River, Australia.
Arch Hydrobiol 136:191–215
Kilham P, Kilham SS, Hecky RE (1986) Hypothesized
resource relationships among African planktonic diatoms.
Limnol Oceanogr 31:1169–1181
Krammer K, Lange-Bertalot H (1986) Susswasserflora von
Mitteleuropa. Bacillariophyceae i Teil Naviculaceae.
Gustav Fischer Verlag, Stuttgart, 876 pp
Krammer K, Lange-Bertalot H (1988) Susswasserflora von
Mitteleuropa. Bacillariophyceae ii Teil Bacillariaceae,
Epithemiaceae, Surirellaceae. Gustav Fischer Verlag,
Stuttgart, 576 pp
Krammer K, Lange-Bertalot H (1991a) Susswasserflora von
Mitteleuropa. Bacillariophyceae iii Teil Centrales,
J Paleolimnol (2009) 41:453–470 469
123
Fragilariaceae, Eunotiaceae. Gustav Fischer Verlag,
Stuttgart, 596 pp
Krammer K, Lange-Bertalot H (1991b) Susswasserflora von
Mitteleuropa. Bacillariophyceae iv Teil Achnanthaceae.
Gustav Fischer Verlag, Stuttgart, 437 pp
Leahy PJ, Kershaw AP, Tibby J, Heinjis H (2005) A palaeo-
ecological reconstruction of the impact of European
settlement on Bolin Billabong, Yarra River floodplain,
Australia. River Res Appl 21:131–149
Lewis GW, Lewin J (1983) Alluvial cutoffs in Wales and the
Borderlands. Special Publications of the International
Association of Sedimentologists, pp 145–154
Lund JWG (1964) Primary production and periodicity of
phytoplankton. Verhandlung Int Vereinigung Limnol
15:37–56
Maheshwari BL, Walker KF, McMahon TA (1995) Effects of
regulation on the flow regime of the River Murray, Aus-
tralia. Regul Rivers Res Manage 10:15–38
Michelutti N, Hay MB, Marsh P, Lesack L, Smol JP (2001)
Diatom changes in Lake Sediments from the Mackenzie
Delta, NWT, Canada: paleohydrological applications.
Arct Antarct Alp Res 33:1–12
Ogden RW (1996) The impacts of farming and river regulation
on billabongs of the southeast Murray Basin, Australia.
Unpublished PhD thesis, Australian National University
Ogden RW (2000) Modern and historical variation in aquatic
macrophyte cover of billabongs associated with catchment
development. Regul Rivers Res Manage 16:497–512
Ogden RW, Spooner N, Reid MA, Head J (2001) Sediment
dates with implications for the age of the conversion from
palaeochannel to modern fluvial activity on the Murray
River and tributaries. Quatern Int 83–85:195–209
Patrick R, Reimer CW (1966) The diatoms of the United
States, vol I. Academy of Natural Science, Philadelphia
Patrick R, Reimer CW (1975) The diatoms of the United
States, vol II. Academy of Natural Science, Philadelphia
Philibert A, Gell P, Newall P, Chessman B, Bate N (2006)
Development of diatom-based tools for assessing stream
water quality in south-eastern Australia: assessment of
environmental transfer functions. Hydrobiologia 572:
103–114
Pressey RL (1986) Wetlands of the River Murray below Lake
Hume. River Murray Commission, Canberra, 134 pp
Rang MC, Schouten CJ (1989) Evidence for historical heavy
metal pollution: the Meuse. In: Petts GE (ed) Historical
change of large alluvial rivers: Western Europe. Wiley,
London, pp 127–142
Reid MA (1997) A diatom-based palaeoecological study of the
dynamics of Goulburn River billabongs, southeastern
Australia. Unpublished PhD thesis, Monash University
Reid MA (2002) A diatom-based palaeoecological study of two
billabongs on the Goulburn River floodplain, southeast
Australia. In: John J (ed) Proceedings of the15th inter-
national diatom symposium. Gantner Verlag, Ruggell, pp
237–253
Reid MA, Ogden RW (2006) Trend, variability or extreme
event? The importance of long-term perspectives in river
ecology. River Res Appl 22:167–177
Reid MA, Fluin J, Ogden RW, Tibby J, Kershaw AP (2002)
Long-term perspectives on human impacts on floodplain-
river ecosystems, Murray-Darling Basin, Australia.
Verhandlung Int Vereinigung Limnol 28:710–716
Reid MA, Sayer CD, Kershaw AP, Heijnis H (2007) Palaeolim-
nological evidence for submerged plant loss in a floodplain
lake associated with accelerated catchment soil erosion
(Murray River, Australia). J Paleolimnol 38:191–208
Reynolds CS (1988) Functional morphology and adaptive
strategies of freshwater phytoplankton. In: Sandgren CD
(ed) Growth and reproductive strategies of freshwater
phytoplankton. Cambridge University Press, Cambridge,
pp 388–433
Scheffer M, Hosper SH, Meijer ML, Moss B, Jeppesen E
(1993) Alternative equilibria in shallow lakes. Trends
Ecol Evol 8:275–279
Scheffer M, Carpenter S, Foley JA, Folke C, Walker B (2001)
Catastrophic shifts in ecosystems. Nature 413:591–596
Schonfelder I, Gelbrecht J, Schonfelder J, Steinberg CEW
(2002) Relationships between littoral diatoms and their
chemical environment in northeastern German lakes and
rivers. J Phycol 38:66–82
Sullivan C, Saunders J, Welsh D (1988) Phytoplankton of the
River Murray: review of monitoring 1980 to 1985. Mur-
ray-Darling Basin Commission, Canberra, p 61
Thoms MC, Ogden RW, Reid MA (1999) Establishing the
condition of lowland floodplain rivers: a palaeo-ecological
approach. Freshw Biol 41:407–423
Tibby J, Reid MA (2004) A model for inferring past conduc-
tivity in low salinity waters derived from Murray River
(Australia) diatom plankton. Mar Freshw Res 55:597–607
Tibby J, Reid MA, Fluin J, Hart BT, Kershaw AP (2003)
Assessing long-term pH change in an Australian river
catchment using monitoring and palaeolimnological data.
Environ Sci Technol 37:3250–3255
Tibby J, Gell PA, Fluin J, Sluiter IRK (2007) Diatom-salinity
relationships in wetlands: assessing the influence of
salinity variability on the development of inference
models. Hydrobiologia 591:207–218
Van den Brink FWB, Van Katwijk MM, Van der Velde G
(1994) Impact of hydrology on phyto- and zooplankton
community composition in floodplain lakes along the
Lower Rhine and Meuse. J Plankton Res 16:351–373
Wolfe BB, Karst-Riddoch TL, Vardy SR, Falcone MD, Hall RI,
Edwards TWD (2005) Impacts of climate and river flooding
on the hydro-ecology of a floodplain basin, Peace-Athabasca
Delta, Canada since AD 1700. Quat Res 64:147–162
Wolfe BB, Hall RI, Last WM, Edwards TWD, English MC,
Karst-Riddoch TL, Paterson A, Palmini R (2006)
Reconstruction of multi-century flood histories from
Oxbow Lake sediments, Peace-Athabasca Delta, Canada.
Hydrol Process 20:4131–4153
470 J Paleolimnol (2009) 41:453–470
123