Autumn Laughbaum, Biostatistician
Performing Small-N Sequencing Workflows: Approaches to Analyzing Trio NGS Data
?
Use the Questions pane in your GoToWebinar window
Questions during the presentation
? ?
Today’s Agenda
Overview
SNP & Variation Suite (SVS)
SVS Demo
Conclusion
1
2
3
4
Workflow Approach: Data Quality Preparation, Initial Investigation, Analysis
Python Interface
Why perform sequence analysis using small families?
Overview
Why perform seq analysis using small families?
Ref_Ref
Ref_AltChild
Ref_Ref
Father Mother
The 3-Part Workflow Approach
SNP & Variation Suite (SVS)
Core Features Packages Core Features Core Features
Powerful Data Management Rich Visualizations Robust Statistics Flexible Easy-to-use
Powerful Data Management Rich Visualizations Robust Statistics Flexible Easy-to-use
Applications Applications
Genotype Analysis DNA sequence analysis CNV Analysis RNA-seq differential expression Family Based Association
Genotype Analysis DNA sequence analysis CNV Analysis RNA-seq differential expression Family Based Association
SNP & Variation Suite (SVS)
Python Interface
Python Interface
SVS Add-On Scripts Repository
SVS Demo
Exome Sequencing
[Poll]
Conclusion
?
Use the Questions pane in your GoToWebinar window
Questions?? ?
