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RISK REDUCTION STRATEGIES FOR WOMEN WITH PATHOGENIC VARIANTS IN MULTIGENE PANEL TESTS Hyung Seok Park, MD, PhD Department of Surgery Yonsei University College of Medicine
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Page 1: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

RISK REDUCTION STRATEGIES FOR WOMEN WITH

PATHOGENIC VARIANTS IN MULTIGENE PANEL TESTS

Hyung Seok Park, MD, PhD Department of Surgery

Yonsei University College of Medicine

Page 2: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

CONFLICT OF INTEREST

• None declared

Page 3: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

SINGLE GENE VS. MULTI-GENE TESTING

Multigene

BRCA1

TP53

PTEN

BRCA2 PALB2 CHEK2

CDH1 MLH1 SKT11

BRIP MUTYH MRE11A

BRCA1

Single gene or limited-gene

BRCA2

Page 4: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

NEXT-GENERATION SEQUENCING(NGS)

• NGS-panel testing for Hereditary cancer syndrome

• High speed and low cost

• WGS, WES - too much

• Target sequencing - target genes of interest

• Simultaneous tests for various mutations

Page 5: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

TRADITIONAL SEQUENCING

Sequencing by terminationTime and Labor

Page 6: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

SANGER VS NGS

TAT: 1mo

TAT: <2wks

Page 7: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

Genomic medicine 2nd edition, Oxford, p149

Point Mutation

Small Insertion/Deletion

Larger Duplication/

Deletion

MLPASouthern Blotting

CGH/SNP Arrarys

FISH

Spectral

Cytogenetics

NGS

bp100 109105

PCR-based

trisomy/ monosomy Altered ploidy

Page 8: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA
Page 9: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

5-April.-2018

Cancer Predisposition Genes

Rahman, Nature 2014

114 Cancer Predisposition Genes (CPGs)

WHAT WE CAN IDENTIFY

Over 100 Cancer predisposition genes

Page 10: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

5-April.-2018

Cancer Gene Truncation Carrier Frequencies across 12 cancer types (rare variants; MAF ≤0.05%)

Lu et al., Nat Commun 2015

9%

21%OV: ovarian cancerSTAD: stomach adenocarcinomaBRCA: breast adenocarcinomaPRAD: prostate adenocarcinomaLUSC: lung squamous cell carcinomaLGG: low grade gliomaHNSC: head and neck squamous cell carcinomaUCEC: uterine corpus endometrial carcinomaLUAD: lung adenocarcinomaKIRC: kidney renal cell carcinomaGBM: glioma multiformeAML: acute myeloid leukemia

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Cancer Genetics Overview (PDQ®)

Page 12: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

Hong Kong Med J 2016 Apr;22(2):171–7 | Epub 14 Mar 2016

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5-April.-2018

Odds ratio of pathogenic or likely pathogenic variants beyond BRCA

Couch et al., JAMA Oncology 2017; Obeid et al., JAMA Oncol 2017 (editorial)

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LIMITATIONS OF PANEL TESTS

• Validation of this novel techniques

• Selection of candidate susceptibility genes

• Difference in ethnicities (ex. L1780P)

• Lack of robust evidence

Page 15: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

RISK REDUCTION STRATEGY

Close observation Chemoprevention

Risk reduction surgery

Page 16: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

CLOSE OBSERVATION

• Clinical Breast Examination

• Screening mammography

• Screening MRI

• Screening Ultrasound - lack of evidence

Page 17: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

Cancers 2018, 10, 477

Page 18: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

CHEMOPREVENTION

• NSABP-P1, P2, IBIS I-II, NCIC CTG MAP.3 Trials

• SERMS (Tamoxifen, Raloxifene)

• Aromatase Inhibitors

Page 19: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

https://www.onclive.com/web-exclusives/breast-cancer-chemoprevention-targeting-the-estrogen-receptor

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RISK REDUCTION SURGERY

• Risk reduction surgery - prophylactic surgery for breast-cancer risk reduction

• Not 100% effective - more than 90% (mastectomy), about 50% reduction (RRSO)

• Case by case, individualized decision

Page 21: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

COSMETIC OUTCOMES

• NSM provides better cosmesis

NSM Robot-assisted NSMTotal Mastectomy

Park et al, GBCC 2019, Poster presentation

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N Engl J Med 2016; 374:454-468

Page 23: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

LACK OF EVIDENCE FOR PATHOGENIC MUTATION IN OTHER CANCER SUSCEPTIBILITY

GENES

• BRCA1/2 - only have evidence

• Others not

Page 24: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

5-April.-2018

Germline mutations, breast cancer risks, and preventive strategies

Modified from Easton et al., N Engl J Med 2015; NCCN guideline version 1.2018

GeneMagnitude of Relative Risk

associated with Truncating Variants*

Risk associated with Missense

Variants†

Estimated Relative Risk

(90% CI)

Absolute risk by 80

years of AgeOther Associated Cancers Prevention option for breast cancer

in NCCN guidelines

Moderate(2-4 times)

High(>4 times) %

BRCA1 � � � 11.4 75 Ovary § 18y-, Breast awareness§ 25y-, Clinical Breast Exam§ 25-29y, annual Breast MRI§ 30-75y, Annual mammography,

consider tomosynthesis and MRI§ Discuss about RRM; Recommend RRSO, 35-40y

BRCA2 � � � 11.7 76 Ovary, prostate, pancreas

TP53 � � � 105 (62-165)Childhood sarcoma,

adreno-cortical carcinoma, brain tumors

§ 20y-, Clinical Breast Exam§ 20-29y, Annual Breast MRI§ 30-75y, Annual Breast MRI

+ mammography, consider tomosynthesis

§ Discuss about RRM

PTEN Unknown Unknown �follicular > papillary thyroid

endometrial cancer, harmatoma syndrome

§ 25y-, Clinical Breast Exam§ 30-35y ~ 75y or 5-10y before the

earliest known BC family, annual mammography, consider tomosynthesis and breast MRI

§ Discuss about RRM

CDH1 Likely Unknown Unknown 6.6 (2.2-19.9) 53 Diffuse gastric cancer

§ 30y- Annual mammogram, consider breast MRI

§ RRM: evidence insufficient, manage based on family history

PALB2 Likely Unknown Unknown 5.3 (9.0-9.4) 45 Pancreas

§ 40y- Annual mammogram, consider tomosynthesis, breast MRI

§ RRM: evidence insufficient, manage based on family history

Page 25: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

LIMITATION OF RRM IN KOREA

• RRM for pathogenic variants other than BRCA1/2

• No insurance cover in Korea

• Cost-effectiveness has not proven

• No evidence at all for RRM in Korea

Page 26: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

Reject

Page 27: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

KBCS GUIDELINES

Page 28: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

PANEL GENES

• The section of multi-gene panel includes several cancer susceptibility genes • ATM, CDH1, CHEK2, NBN, PALB2, PTEN, and TP53.

Page 29: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

SURVEILLANCE

• Breast screening - Annual mammography (or tomosynthesis) and breast MRI with contrast

• PTEN

• Self examination at age 18

• CBE from at age 25 (6-12monthly) or 5-10 years before the earliest known breast cancer in the family

• Breast screening at age 30-35 or or 5-10 years before the earliest known breast cancer in the family

Page 30: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

SURVEILLANCE

• PALB2, CDH1 - annual breast screening using mammography and breast MRI at age 30

• ATM, CHEK2, NBN - the breast screening at age 40,

Page 31: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

CHEMOPREVENTION

• lack of evidence

I’m so…Sorry

This is not

my fault

http://jjalbang.today/view/%ED%95%B4%EC%9A%94/2549

Page 32: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

RISK REDUCTION SURGERY

• RRM

• PTEN - discuss with women for option of RRM.

• Appropriate counseling should be included.

• Address psycosocial, social, and QoL aspects of undergoing RRM

• insufficient evidence, manage based on family history - ATM, CDH1, CHEK2, NBN, PALB2

Page 33: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

SUMMARY

• Multi-gene panel enables identifying mutations in various cancer susceptibility genes with high speed and low cost compared to the Sanger sequencing.

• Surveillance and risk-reducing surgery can be discussed with women with pathogenic variants in multi-gene panel testing, but risk-reducing surgery should be considered by genetic counseling based on individualized approaches because of lack of evidence.

Page 34: RISK REDUCTION STRATEGIESgbcc.kr/upload/gbc2019 RRS 2.pdf · Genomic medicine 2nd edition, Oxford, p149 Point Mutation Small Insertion/ Deletion Larger Duplication/ Deletion MLPA

ACKNOWLEDGEMENTS

JS Park, MD, PhD Severance Hospital, Yonsei Cancer Center Breast Cancer Center

Breast Surgery: BW Park, YU Cho, SI Kim, S Park, JY Kim, KB Lee, JA Lee, HM Lee Medical Oncology: S Paik, JH Sohn, GM Kim, MH Kim Radiology: EK Kim, MJ Kim, HJ Moon, JH Yoon, Vivian Y Park Radiation Oncology: KC Keum, YB Kim, JS Jang Pathology: JS Koo Plastic Surgery: DH Lew, DW Lee, SY Song Nuclear Medicine: MJ Yoon, HJ Kim Coordinator, RN : JW Jung, JS Park

Cancer Prevention Center JS Park, EJ Nam, JW Han, ST Lee, JR Choi, TI Kim RN (genetic counselor) : YJ Lee, SH Lee

Breast Cancer Translational Research Lab YA Choi, HJ Han, JD Lee, AR Choi


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