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Selective breeding of Rotifers - Sustainable aquaculture and

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Selective breeding of Rotifers Improved hatchery and grow-out technology for grouper aquaculture in the Asia-Pacific region (FIS/97/73) Dr Inneke Dr Inneke Rumengan Rumengan ; Mr ; Mr Stenly Wullur Stenly Wullur Sam Sam Ratulangi Ratulangi University University Dr Richard Knuckey Dr Richard Knuckey Queensland Department of Primary Industries Queensland Department of Primary Industries
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Selective breeding of RotifersImproved hatchery and grow-out technology for grouper aquaculture in the

Asia-Pacific region (FIS/97/73)

Dr Inneke Dr Inneke RumenganRumengan; Mr ; Mr Stenly WullurStenly WullurSam Sam Ratulangi Ratulangi UniversityUniversity

Dr Richard KnuckeyDr Richard KnuckeyQueensland Department of Primary IndustriesQueensland Department of Primary Industries

Rotifers are traditional aquaculture food for fish Rotifers are traditional aquaculture food for fish larvaelarvae

Grouper larvae and rotifersGrouper larvae and rotifers

Rotifers <100 µm best for 1Rotifers <100 µm best for 1stst feeding larvaefeeding larvaeScreening rotifers is wastefulScreening rotifers is wastefulSelect for rotifer strain with smaller average lengthSelect for rotifer strain with smaller average length

123 ± 8123 ± 8147 ± 11147 ± 11SSSS--typetype

133 ± 10133 ± 10176 ± 16176 ± 16SS--typetype

186 ± 13186 ± 13219 ± 13219 ± 13LL--typetype

Width (µm)Width (µm)Length (µm)Length (µm)RotiferRotifer

First feeding grouper larvae have a mouth gape large enough only for SS-type rotifers

RotifersRotifers

A normal population of A normal population of rotifers has rotifers has reproducing females of reproducing females of a range of sizesa range of sizes

Apply selection pressures to get a population of rotifers Apply selection pressures to get a population of rotifers with smaller average body lengthwith smaller average body length

•• FirstlyFirstly-- Characterise rotifer strainCharacterise rotifer strain•• SecondlySecondly-- Manipulate culture methods to select for Manipulate culture methods to select for

smaller rotifersmaller rotifer

90 100 110 120 130 140 150 160 170 180

35

30

25

20

15

10

5

0

Rotifer ResearchRotifer Research

Characterise rotifer strainCharacterise rotifer strain•• Growth rateGrowth rate

-- Relationship between salinity growth rate and Relationship between salinity growth rate and reproductive sizereproductive size

•• HeritabilityHeritability-- Size of Size of amicticamictic & resting eggs and resulting rotifer& resting eggs and resulting rotifer-- Size of mother and resulting offspringSize of mother and resulting offspring

Manipulation of rotiferManipulation of rotifer•• Effect of diet particle size on rotifer sizeEffect of diet particle size on rotifer size•• Mutation by UV lightMutation by UV light

Clonal stock

30 eggs in each well

• Different salinities : 5, 20, 30 ppt• N. oculata 3 x 106 cells/ml• Observation at 1 hour interval for 24 hours

1 h 2 h 3 h

24 h

B

A

C

Size measurements

A = Lorica lengthB = WidthC = Anterior width

Characterise Characterise -- development ratedevelopment rate

Lower salinity = faster developmentLower salinity = faster development

Characterise Characterise -- development ratedevelopment rate

100

120

140

160

180

0 2 4 6 8 10 12 14 16 18 20 22 24Age post-hatch (h)

Loric

a le

ngth

(µm

)

5 ppt

20 ppt

30 ppt

Reproductive females appear before maximum size Reproductive females appear before maximum size is reachedis reached

•• 5ppt = 6 h; 20 ppt = 12 h; 30 ppt = 20 h5ppt = 6 h; 20 ppt = 12 h; 30 ppt = 20 h

Characterise Characterise -- heritability heritability

Amictic Amictic eggseggs•• Relationship between:Relationship between:

•• rotifer and egg sizerotifer and egg size•• egg size and offspringegg size and offspring

Resting eggsResting eggs•• Relationship between small Relationship between small

resting egg, hatched rotifer resting egg, hatched rotifer and resulting offspringand resulting offspring

Characterise Characterise -- heritabilityheritability

Poor correlation between the size of parent rotifer and Poor correlation between the size of parent rotifer and theirtheir amicticamictic eggegg

50

60

70

80

90

100

90 110 130 150 170 190Lorica length (µm)

egg

size

(µm

)

Rotifer length vs Amictic egg size

Freq

uenc

y

0

4

8

12

16

20

110 120 130 140 150 160 170 180

Lorica length (µm)

Average = 147 µm

Offspring of rotifer hatched from small amictic egg

Offspring from rotifer hatched from small Offspring from rotifer hatched from small amicticamictic egg egg are not smaller than initial populationare not smaller than initial population

Characterise Characterise -- heritabilityheritability

Offspring from small resting egg and small Offspring from small resting egg and small parent are not smaller than initial populationparent are not smaller than initial population

Female parent

Offspring

Avg = 148 µm0

2

4

6

8

10

12

90 100 110 120 130 140 150 160 170

Lorica length (µm)

Freq

uenc

ySmall resting eggs

Hatched population

Select small reproductive female

Characterise Characterise -- SummarySummary

Distribution skewed toward Distribution skewed toward small rotifer because small rotifer because rotifers continue to increase rotifers continue to increase in size after becoming in size after becoming reproductive and not due to reproductive and not due to genetic variation. genetic variation. 90 100 110 120 130 140 150 160 170 180

35

30

25

20

15

10

5

0

Rotifer size is only weakly Rotifer size is only weakly related to parent, related to parent, amictic amictic or or resting egg size.resting egg size.

Clonal stock1st laid eggs

P • Different diets : - Stichococcus sp. (1 pg/cell)

(30 ppt) - N. oculata (10 pg/cell)- Chlorella like (10 pg/cell)- Tetraselmis sp. (170 pg/cell)

• Observe at 12 h interval until all P dead• Life table computation

A

BC

3 days old rotifers

F1 A = Lorica lengthB = WidthC = Anterior width

Manipulation Manipulation -- Diet particle sizeDiet particle size

Manipulation Manipulation -- Diet particle sizeDiet particle size

Size distribution of reproductive females is effected by Size distribution of reproductive females is effected by algal dietalgal dietThe diet with the smallest particle size (The diet with the smallest particle size (StichococcusStichococcus) ) produced a population with the highest percentage of small produced a population with the highest percentage of small (<150 µm) rotifers(<150 µm) rotifers

<150 µm

52%

151-180 µm

48%

Stichococcus sp. (n = 52)

72% 28%

Chlorella like (n = 40)

6%

94%

Tetraselmis sp. (n = 16)

51%

30%19%

Nannochloropsis oculata (n = 57)

>180 µmLorica length

Rotifer stock

Eggs collected

UV treatments : 30 & 60 min

UV lamp

B

A

C

UV treated eggs

Clonal culture

A = Lorica lengthB = WidthC = Anterior width

Manipulation Manipulation –– UV exposureUV exposure

Manipulation Manipulation –– UV exposureUV exposure

Some clonal lines of Some clonal lines of rotifers from UV rotifers from UV treatment have smaller treatment have smaller size than original populationsize than original populationSome of this difference Some of this difference may be due to a reduced may be due to a reduced growth rategrowth rateLongLong--term stability of the term stability of the size trait is not yet size trait is not yet establishedestablished

0

10

20

30

40

50

110 120 130 140 150Lorica length (µm)

160

0

10

20

30

40

50

110 120 130 140 150 160 170

Size distribution of two UV treated clonal lines

ConclusionsConclusions

Two methods have shown potential to Two methods have shown potential to select for smaller rotifers in an SSselect for smaller rotifers in an SS--rotifer populationrotifer population

•• DietDiet-- very small particle size of diet very small particle size of diet produces a rotifer population with more produces a rotifer population with more small individualssmall individuals

•• MutationMutation-- UV exposure produces UV exposure produces population with a smaller average body population with a smaller average body sizesize


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