+ All Categories
Home > Documents > The Description of Non-Covalent Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

The Description of Non-Covalent Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Date post: 21-Mar-2016
Category:
Upload: morela
View: 29 times
Download: 4 times
Share this document with a friend
Description:
The Description of Non-Covalent Interactions in Terms of Bent´s Rule Sławomir J. Grabowski Faculty of Chemistry, University of the Basque Country UPV/EHU, and Donostia International Physics Center (DIPC), P.K. 1072, 20080 Donostia, Spain - PowerPoint PPT Presentation
Popular Tags:
16
The Description of Non-Covalent Interactions in Terms of Bent´s Rule Sławomir J. Grabowski Faculty of Chemistry, University of the Basque Country UPV/EHU, and Donostia International Physics Center (DIPC), P.K. 1072, 20080 Donostia, Spain IKERBASQUE, Basque Foundation for Science, 48011 Bilbao, Spain e-mail: [email protected]
Transcript
Page 1: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

The Description of Non-Covalent Interactions in Terms of Bent´s Rule

Sławomir J. Grabowski

Faculty of Chemistry, University of the Basque Country UPV/EHU,and Donostia International Physics Center (DIPC),

P.K. 1072, 20080 Donostia, Spain

IKERBASQUE, Basque Foundation for Science, 48011 Bilbao, Spaine-mail: [email protected]

Page 2: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Studies on non-covalent interactions

Rovira, C.; Novoa, J.J. Strength and Directianolity of the S…S Intermolecular Interactions, Chem. Eur. J. 1999, 5, 3689-3697

Braga, D.; Bazzi, C.; Grepioni, F.; Novoa, J.J. Electrostatic compression on non-covalent interactions : the case of π stacks involving ions, New.J.Chem. 1999, 23, 577.

Müller-Dethlefs , Hobza, P, Noncovalent Interactions: A Challenge for Experiment and Theory, Chem. Rev. 2000, 100, 143-167

Hobza, P.; Müller-Dethlefs, K. Non-Covalent Interactions, Theory and Experiment, Royal Society of Chemistry, Thomas Graham House, Science Park, Milton Road, Cambridge, 2010.

Page 3: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Lewis acid – Lewis base

Electron charge transfer

A-H+…-B hydrogen bond

A-H+…-H-B dihydrogen bond

A+…-H-B hydride bond

C-X+…-H-B halogen-hydride bond

C-X+…-B halogen bond

P.Lipkowski, S.J.Grabowski, J.Leszczynski J.Phys.Chem. A 2006, 110, 10296.

Page 4: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Hydrogen bondHB

A-H…B

Hydride bondHeB

A…H-B

Halogen bondXB

A-X…B

Dihydrogen bondDHB

A-H…H-B

Halogen-hydride bondXHeB

A-X…H-B

Dihalogen bondDXB

A-X…X-B

Halide bondXeB

A…X-B

S.J.Grabowski, J. Phys. Chem. A 2011, 115, 12340–12347S.J.Grabowski, J. Phys. Chem. A 2012, 116, 1838−1845

Page 5: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

A-H…B hydrogen bond formation is a combination of two effects

F. Weinhold, C. Landis, Valency and Bonding, A Natural Bond Orbital Donor – Acceptor Perspective, Cambridge University Press 2005V. Alabugin, M. Manoharan, S. Peabody, F. Weinhold, J.Am.Chem.Soc. 2003, 125, 5973-5987 1. the hyperconjugative A-H bond weakening the charge transfer from the lone pair of B into the antibonding σ* orbital of the A-H bondoften attributed to covalency of the hydrogen bond

Reed, A.E.; Curtiss, L.A.; Weinhold, F. Chem.Rev. 1988, 88, 899-926.Sobczyk, L.; Grabowski, S.J.; Krygowski, T.M. Chem.Rev. 2005, 105, 3513-3560. Grabowski, S.J. Chem.Rev. 2011, 11, 2597-2625.

2. the rehybridization-promoted bond A-H strengthening.the increase of the s-character in the A-atom hybrid orbital of the A-H bonda consequence of Bent´s rule

A – H B

e e e

- + -

- - -

Page 6: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

According to Bent´s rule

atoms maximize the s-character in hybrid orbitals aimed toward electropositive substituents and maximize their p-character in such orbitals aimed toward electronegative substituents

H. A. Bent, Chem.Rev. 1961, 61, 275-311

Page 7: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

C Hal

greatest exchange repulsion

least exchange repulsionC Hal

electrostatic repulsion of nucleophiles

electrostatic attraction or small repulsionof nucleophiles

F.Zordan et al., J.Am.Chem.Soc. 127 (2005), 5979-5989.

Clark, T.; Hennemann, M.; Murray, J.S.; Politzer, P. J.Mol.Mod. 2007, 13, 291. Murray, J.; Concha, M.C.; Lane, P.; Hobza, P.; Politzer, P. J.Mol.Mod. 2008, 14, 699.

Page 8: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Lewis acidHydrogen bond

Halide bond

Lewis baseHalogen bond

Dihalogen bondHalogen-hydride bond

Page 9: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

F3CCl…H3O+ - CAHB(+)

F3CCl…HF - HB

F3CCl…HMgH - XHeB

F3CCl…ClCH3 – DXB

F3CCl…OCH2 - XB

MP2/6-311++G(d,p) calculations

Page 10: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Moiety Cl…A(B) C-Cl C-Cl…B(A) Ebin

OCH2 3.059 1.740 179.8 -1.42Cl- 3.098 1.721 180.0 -7.30OH- 2.460 1.734 175.5 -13.76FCl 2.990 1.744 175.6 -0.43

ClCH3 3.467 1.745 168.8 -0.69MgH2 2.964 1.742 169.4 -1.10

HF 2.592 1.758 96.6 -0.13H3O+ 1.979 1.795 94.1 -7.53

HCl2O+ 1.787 1.823 95.6 -9.02Li+ 2.482 1.773 78.7 -12.13

F3CCl - 1.746 - -

The chlorine – Lewis acid/Lewis base center distance (Cl…A(B), in Å), C-Cl bond length (Å), C-Cl…B(A) angle (degrees) as well as binding energy, Ebin (corrected for BSSE, in kcal/mol).

Page 11: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Moiety Eltrans C-charge Cl-charge Pol(%C) s(%C)OCH2 1.5 0.9844 0.0318 47.76 27.27

Cl- 54.2 0.9426 0.0967 50.18 29.96OH- 123.4 0.9162 0.1060 51.88 31.54FCl 2.2 0.9904 0.0154 47.29 26.90

ClCH3 6.0 0.9906 0.0116 47.28 26.89MgH2 2.6 0.9882 0.0234 47.53 27.16

HF -5.6 1.0021 -0.0129 46.38 25.95H3O+ -122.7 1.0318 0.0241 44.28 23.84

HCl2O+ -221.7 1.0507 0.0652 42.23 22.25Li+ -69.2 1.0122 0.0110 45.99 25.4

F3CCl - 0.9942 0.0073 47.0 26.62

Eltrans (in milielectrons) - the amount of electrons transferring, Pol(%C) - the CCl proton donating bond polarization (% at C-atom), s(%C) - the percentage s-character in C orbital of the CCl proton donating bond

Page 12: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

y = -68.864x - 0.1459R² = 0.9844

-6

-4

-2

0

2

4

6

-0.1 -0.08 -0.06 -0.04 -0.02 0 0.02 0.04 0.06 0.08

Δ C-charge (au)

Δ C-Cl polarization (% at C)F3CCl - Lewis acid

F3CCl -Lewis base

Page 13: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

y = 0.9865x + 0.0171R² = 0.9964

-6

-4

-2

0

2

4

6

-6 -4 -2 0 2 4 6

Δ C-Cl polarization (% at C)

Δ s-character in C-orbital of C-Cl (%)

F3CCl - Lewis base

F3CCl - Lewis acid

Page 14: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Pol(%F) 79.3S(%F) 24.2

Pol(%C) 50.4S(%C) 43.0

Pol(%F) 77.6S(%F) 20.7

Pol(%C) 47.9S(%C) 41.1

Pol(%F) 78.6S(%F) 23.3

Pol(%C) 49.8S(%C) 42.7

Page 15: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Santiago de Compostela- WATOC 2011

Page 16: The Description of Non-Covalent  Interactions in Terms of Bent´s Rule Sławomir J. Grabowski

Thank you for attention

Financial support comes from Eusko Jaurlaritza (GIC 07/85 IT-330-07) and the Spanish Office for Scientific Research (CTQ2011-27374). Technical and human support provided by IZO-SGI SGIker (UPV/EHU, MICINN, GV/EJ, ESF) is gratefully acknowledged.


Recommended