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Virus shapes and buckling transitions in …downloads.hindawi.com/journals/cmmm/2005/603461.pdfVirus...

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Virus shapes and buckling transitions in spherical shells* DAVID R. NELSON Lyman Laboratory of Physics, Harvard University, Cambridge, MA 02138, USA We show that the icosahedral packings of protein capsomeres proposed by Caspar and Klug for spherical viruses become unstable to faceting for sufficiently large virus size, in analogy with the buckling instability of disclinations in two-dimensional crystals. The faceted shape depends only on the dimensionless Foppl-von Karman number g ¼ YR 2 =k; where Y is the two-dimensional Young’s modulus of the protein shell, g is its bending rigidity and R is the mean virus radius. Our model, based on the nonlinear physics of thin elastic shells, produces excellent one parameter fits in real space to the full three- dimensional shape of large spherical viruses such as HK97 ðg ¼ 1480Þ and Yeast L-A ðg ¼ 547Þ: The shape can be parameterized more quantitatively in terms of a spherical harmonic expansion. We also investigate elastic shell theory for extremely large g, 10 3 , g , 10 8 ; and find results applicable to icosahedral shapes of large vesicles studied with freeze fracture and electron microscopy. Finally, we discuss an instability towards grain boundaries in shells with an exceptionally large bending rigidity, which has been observed experimentally in related problems in spherical crystallography such as the packing of colloidal particles on the surface of water droplets in oil [1]. References [1] Bausch, A.R., Bowick, M.J., Cacciuto, A., Dinsmore, A.D., Hsu, M.F., Nelson, D.R., Nikolaides, M.G., Travesset, A. and Weitz, A., 2003, Grain boundary scars and spherical crystallography. Science, 299, 1716. Journal of Theoretical Medicine ISSN 1027-3662 print/ISSN 1607-8578 online q 2005 Taylor & Francis Group Ltd http://www.tandf.co.uk/journals DOI: 10.1080/10273660500148838 *Work on viruses carried out in collaboration with Jack Lidmar and Leonid Mirny: More information can be found in Phys. Rev. E 68, 051910 (2003) or http://www.arxiv.org/PS_cache/cond-mat/pdf/0306/0306741.pdf Journal of Theoretical Medicine, Vol. 6, No. 2, June 2005, 137
Transcript

Virus shapes and buckling transitions in spherical shells*

DAVID R. NELSON

Lyman Laboratory of Physics, Harvard University, Cambridge, MA 02138, USA

We show that the icosahedral packings of protein

capsomeres proposed by Caspar and Klug for spherical

viruses become unstable to faceting for sufficiently large

virus size, in analogy with the buckling instability of

disclinations in two-dimensional crystals. The faceted shape

depends only on the dimensionless Foppl-von Karman

number g ¼ YR2=k; where Y is the two-dimensional

Young’s modulus of the protein shell, g is its bending

rigidity and R is the mean virus radius. Our model, based on

the nonlinear physics of thin elastic shells, produces

excellent one parameter fits in real space to the full three-

dimensional shape of large spherical viruses such as HK97

ðg ¼ 1480Þ and Yeast L-A ðg ¼ 547Þ: The shape can be

parameterized more quantitatively in terms of a spherical

harmonic expansion. We also investigate elastic shell theory

for extremely large g, 103 , g , 108; and find results

applicable to icosahedral shapes of large vesicles studied

with freeze fracture and electron microscopy. Finally, we

discuss an instability towards grain boundaries in shells with

an exceptionally large bending rigidity, which has been

observed experimentally in related problems in spherical

crystallography such as the packing of colloidal particles on

the surface of water droplets in oil [1].

References

[1] Bausch, A.R., Bowick, M.J., Cacciuto, A., Dinsmore, A.D., Hsu,M.F., Nelson, D.R., Nikolaides, M.G., Travesset, A. and Weitz, A.,2003, Grain boundary scars and spherical crystallography. Science,299, 1716.

Journal of Theoretical Medicine

ISSN 1027-3662 print/ISSN 1607-8578 online q 2005 Taylor & Francis Group Ltd

http://www.tandf.co.uk/journals

DOI: 10.1080/10273660500148838

*Work on viruses carried out in collaboration with Jack Lidmar and Leonid Mirny: More information can be found in Phys. Rev. E 68, 051910 (2003)or http://www.arxiv.org/PS_cache/cond-mat/pdf/0306/0306741.pdf

Journal of Theoretical Medicine, Vol. 6, No. 2, June 2005, 137

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