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Allosteric Modi¢ers of NeuronalNicotinic Acetylcholine Receptors:NewMethods, New Opportunities
Ruin Moaddel,1 Krzysztof Jozwiak,1,2 Irving W. Wainer1
1Gerontology Research Center, Laboratory of Clinical Investigations,
National Institute on Aging/NIH, Baltimore, Maryland2Department of Chemistry, Medical University of Lublin, Lublin, Poland
Published online 19 January 2007 in Wiley InterScience (www.interscience.wiley.com).
DOI 10.1002/med.20091
!
Abstract: Allosteric, non-competitive inhibitors (NCIs) of neuronal nicotinic acetylcholine
receptors (nAChRs) have been shown to produce a wide variety of clinically relevant responses.
Many of the observed effects are desired as the nAChR is the therapeutic target, while others are
undesired consequences due to off-target binding at the nAChR. Thus, the determination of
whether or not a lead drug candidate is an NCI should play an important role in drug discovery
programs. However, the current experimental techniques used to identify NCIs are challenging,
expensive, and time consuming. This review focuses on an alternative approach to the investigation
of interactions between test compounds and nAChRs based upon liquid chromatographic
stationary phases containing cellular fragments from cell lines expressing nAChRs. The develop-
ment and validation of these phases as well as their use in drug discovery and pharmacophore
modeling are discussed. � 2007 Wiley Periodicals, Inc.y Med Res Rev, 27, No. 5, 723–753, 2007
Key words: affinity chromatography; molecular modeling; non-competitive inhibition; quina-
crine-binding site; ethidium-binding site
1 . I N T R O D U C T I O N
The health risks associated with tobacco and tobacco smoke have been clearly defined and well
publicized. As a result, one aspect that is often overlooked, is the fact that the tobacco plant and
tobacco smoke contain more than 4,000 compounds,1 many of which may possess beneficial
pharmacological and therapeutic properties. This possibility has been suggested by the observed
physiological effects associated with smoking that include alertness, reduced anxiety, muscle
yThis article is a U.S.Government workand, as such, is in thepublic domain in the United Statesof America.Contractgrant sponsor:National Institute on Agingof theNational Institutes of Health.Correspondence to: IrvingW. Wainer,Ph.D.,BioanalyticalandDrugDiscoveryUnit,National InstituteonAging,National Institutes
of Health,Gerontology ResearchCenter, 5600 Nathan ShockDrive,Baltimore 21224-6825,MD.E-mail:[email protected]
Medicinal Research Reviews, Vol. 27, No. 5, 723^753, 2007
� 2007 Wiley Periodicals, Inc.
relaxation, and analgesia,2 as well as specific disease-related effects, which have been observed in
Alzheimer’s disease, Parkinson’s disease, and schizophrenia.1,3
Although tobacco and tobacco smoke have been shown to contain compounds that inhibit a
number of different targets such as monoamine oxidases,4 the therapeutic responses associated with
tobacco smoking have been assumed to be primarily due to the interaction of nicotine with neuronal
nicotinic acetylcholine receptors (nAChRs). This assumption was derived from a number of clinical
observations including improved cognitive responses and memory in Alzheimer’s patients who had
received intravenous, subcutaneous, or trans-dermal doses of nicotine, the lower than expected
incidence of Parkinson’s disease in smokers, and the prevalence of cigarette smoking among patients
with schizophrenia.3 These observations have led to the initiation of drug discovery programs which
have the development of nAChR agonists as the primary focus.2,5 Some of the nAChR agonists
currently in clinical development are presented in Table I.2
An example of an nAChR-targeted drug discovery program is the development of a7 nAChR
selective agonists for the treatment of schizophrenia1,6 and Alzheimer’s disease.1,2,7 The role of the
a7 nAChR in schizophrenia has been specifically associated with a disease-related decrease in
auditory sensory gating, the ability to suppress the evoked response to the second of two auditory
stimuli.6 The first prototypical agent aimed at normalizing auditory gating is the a7-selective agonist3-[(2,4-dimethoxy)benzylidene]-anabasine.6 This compound also enhances cognitive behavior and
is under investigation for use in the treatment of Alzheimer’s disease.8
Although current drug discovery programs are primarily concentrated on the development of
nAChR agonists, nAChR antagonists have been in clinical use for over 60 years, for example, D-
tubocurarine, a competitive inhibitor of peripheral nAChRs, was introduced into clinical anesthesia
and surgicalmuscle relaxation in 1942.9 Thegrowing interest in nAChR antagonistswas reflected in a
recent review by Dwaskin and Crooks, which identified these agents as ‘‘a new direction for drug
discovery.’’10 A possible pharmacological basis for this approach is the observation that nAChR
agonists rapidly desensitize the receptors, which essentially inhibits their function. Thus, if inhibition
and not excitation is the actual therapeutic effect, competitive inhibitors or agonists that result in rapid
desensitization should work equally well.10
Table I. Compound that Act as Agonists of Neuronal Nictonic Acetylcholine Receptors, which
Are Currently in Clinical Development
Seereference [2] fordetails.1ABT, Abbott Labs; AZD, Astra Zeneca; MEM,Memory Pharmaceuticals; SSR,Sanofi Synthelabo;TC,Targacept; ACh, acetylcholine;
NR,nicotinicreceptor.2Discontinuedclinicaldevelopment intheUS.
724 * MOADDEL, JOZWIAK, AND WAINER
Competitive inhibition is only one approach to the antagonism of receptor activity. Allosteric
modulators, including non-competitive inhibitors (NCIs) have been recently suggested as a ‘‘new
generation’’ of receptor antagonists.11 Non-competitive inhibition of nAChRs is a recognized
phenomenon, and more than 50 marketed drugs (see Appendix) have been identified as NCIs of the
neuronal nAChR subtypes a3b2, a3b4, a4b2, a4b4, and a7. For most of the compounds listed in
the Appendix, the non-competitive inhibition of nAChRs was a secondary discovery, as these drugs
were primarily directed at other receptors. Indeed, NCI activity may be the source of many side
effects attributed to these compounds; for example, the impairment of cardiovascular function
observed during ketamine anesthesia has been associated with its inhibitory action on ganglionic
nAChRs.12 Thus, the screening of drug candidates for NCI activity at the nAChR, as well as other
ligand gated ion channels, may be a method for the identification of unwanted off-target
pharmacological effects before they are observed in clinical trials.
While the screening for off-targetNCI activity represents a useful component of a drug discovery
program, non-competitive inhibition of nAChRs also presents an opportunity for new drug
development. The antidepressants sertraline, paroxetine, nefazodone, and venlafaxine are potent
NCIs, and it has been suggested that nAChR subtypes in the brain could be targets for the
development of new antidepressant drugs.13 The NCIs mecamylamine and bupropion are currently
used in anti-smoking therapy14 and the use of 18-methoxycoronaridine in combination with
mecamylamine or dextromethorphan (DM) has been suggested as an approach to treat opioid and
stimulant addiction.15
A key problem in the development of a drug discovery program based on the non-competitive
inhibition of the nAChR is the difficulty of identifying and quantifying NCI activity. The standard
experimental approach to the determination of NCI activity at the nAChR involves the measurement
of concentration-dependent effects on whole cell currents16 or nicotine-induced 86Rbþ cellular
efflux.17,18 These techniques are not well suited for drug discovery programs as they are time-
consuming, expensive, exacting, and cannot be standardized for all subtypes of the nicotinic receptor.
We recently reported an alternativemethod for the identification and characterization of NCIs of
the nAChR.19,20 This approach employs liquid chromatographic stationary phases containing
immobilized cellular membranes obtained from cell lines expressing the target nAChR, non-linear
chromatography (NLC), and molecular modeling. Initial studies have demonstrated that the
technique can be used to identify NCIs,19,20 predict IC50 values,21 and estimate the rate of recovery
from functional blockade.22 This reviewwill discuss the current status of this work and suggest future
applications to drug discovery utilizing immobilized receptor and transporter-based stationary
phases and chemometric analyses.
2 . N E U R O N A L N I C O T I N I C A C E T Y L C H O L I N E R E C E P T O R S
Neuronal nicotinic acetylcholine receptors (nAChRs) are a family of ligand-gated ion channels found
in the central and peripheral nervous systems that regulate synaptic activity. The receptor is
composed of five separate trans-membrane proteins (subunits), each containing a large extra-cellular
N-terminal domain, four membrane spanning alpha helices (M1, M2, M3, and M4) and a small C-
terminal domain23 (Fig. 1). The subunits are oriented around a central pore24,25 and the resulting
transmembrane ion channel is formed by a pentameric arrangement of the M2 helical segments
contributed by each of the five proteins26 (Fig. 1).
At present, 12 different neuronal subunits have been identified, 9 labeled alpha (2–10) and 3
labeled beta (2–4). The subunits form channels of a wide variety of homomeric and heteromeric
nAChRs.27 The most common subunit stoichiometry has been determined to be (aX)2(bY)3,(X ¼ 2–6; Y ¼ 2–4) for heteromeric subtypes and (aZ)5, (Z ¼ 7–10) for the homomeric subtypes.
However, other, more complex, combinations have also been reported.
ALLOSTERIC MODIFIERS * 725
Subtypes of the nAChR are found in different locations of the central and peripheral nervous
system, and have been associated with different pharmacological functions. In the central nervous
system, the a4b2 nAChR subtype is expressed in the thalamus, cerebral cortex, and dorsal
hippocampus, and the receptor mediates aspects of the cognition and memory, and participates in
sensory gating2 including pain, anxiety, and depression.1–3,5 The a3b4-like subtype is highly
expressed in the medial habenula, the interpeduncular nucleus, the optic tract, cerebellum, and
cranial nerve nuclei,2 and plays a role in norepinephrine release as well as cardiovascular and
gastrointestinal action. The a7 nAChR has been found in the cerebral cortex, hippocampus, and
hypothalamus,2 and plays a role in cognition, memory, and auditory processing.3,6 In addition, the a7nAChR has been identified on the surface of human macrophages and it has been suggested that this
receptor plays a role in regulation of inflammation.28 The a4b4 and a3b2 subtypes have also been
identified in the central nervous system.2
3 . A G O N I S T - B I N D I N G S I T E S A N D R E C E P T O R G A T I N G
The nAChR contains multiple-binding domains, which can accommodate different classes of
endogenous and exogenous compounds (Fig. 2). Two homologous, neurotransmitter-binding sites
Figure 1. Schematic representationof theneuronalnicotinic acetylcholine receptor showing the relationship of the receptor to theion channel, the membrane, and the arrangement of the four transmembrane-spanninghelices forming the channel.The various
regions of the channel ‘‘rings’’arealso shown.See reference [20] fordetails.
726 * MOADDEL, JOZWIAK, AND WAINER
are formed by the N-terminal domains where cholinergic agonist and competitive antagonists bind.
This site has been the subject of a number of structure–activity relationship (SAR) studies due to its
recognized therapeutic importance and to the availability of rapid and facile experimental procedures
to determine binding and functional properties. These studies have been recently reviewed.29
Agonists bind to the nAChR in the resting, or low affinity state, produce conformational changes
in the internal lumen of the receptor that open the channel to the passage of cations such as sodiumand
Figure 2. Transverse schematic representation of the muscle-type AChR showing the domains involved in the specific binding of
non-competitive inhibitors fromexogenousorigin.Topand right panel: Schematic representationofasectionof the AChRat�46 —
from the membrane surface viewed from the synaptic cleft. The ethidium locus can be putatively located in the AChR vestibule
betweenbothacetylcholine (ACh)-bindingsites.The ethidiumsite includeseitheraregionnear theag interface, beingthisa submit
theonethatbears thehigh-affinity Ach-bindingsite, oraportionoftheb subunit.Bottomandleftpanel:Schematic representationof
asectionoftheAChRat the lipid^aqueous interface viewedfromthesynaptic cleft.Theaminoacidchainfromeachsubunit (a,b, g,and d) crossesthe lipidmembranefour times (M1^M4).Theperimeterof theAChRissurroundedby� 45 lipidmolecules, that is, the
annular lipid domain.The 23 empty circles around the AChR represent the phospholipidheadgroups on the extracellular leaflet of
the lipidbilayer.ThesmallblackcirclesbetweensubunitsandbetweendomainsM1/M4andM3/M4 represent thepossible locations
for non-annular lipid domains.The high-affinity quinacrine-binding site is located at the aM1transmembrane domain, near the bsubunit.Bottomandrightpanel:SchematicrepresentationoftwoM2 transmembranedomainsoftheAChRsubunit.Theaminoacid
side chains from both aM2 domains represent the transmembrane aM2 domains and the transmembrane a-helix. A consensus
exists that the interactionof certain residues from the a subunit (shownhere as filled spheres), inaddition to the respectivehomolo-
gousaminoacids fromtheother subunits (not shownforsimplicity), formaseriesofstratified ringsdisposed fromthe extracellular to
the intracellularside inthefollowingmanner:outerorextracellular, valine, leucine, serine, threonine, intermediate, andcytoplasmicor
inner ring. Inaddition, someof themare involved in thebindingof the so-called luminal non-competitive inhibitors. Inparticular, the
bindingsite for the localanestheticmeproadifen is locatedclosetothemouthofthe ionchannel, probablyat thenegativelycharged
outerorextracellular ring.Thebindingsite forcembranoidsand trifluoromethyl-iodophenyldiazirine (TID) is related toboththevaline
and the leucine ring.Finally, thebindingsite forchlorpromazine (CPZ), triphenylmethylphosphonium (TPMPþ), the local anestheticQX-222, andphencyclidine (PCP) includes the leucine, the serine, and the threonine ring.Reprinted fromreference [30].
ALLOSTERIC MODIFIERS * 727
potassium, and the process ends with the channel closed and the receptor in the desensitized, or high
affinity state. The agonist-induced gating of the nAChR has been described as an organized and
sequential movement of segments of the protein.27
The key feature of the central lumen is the existence of a series of amino acid rings, in which an
amino acid (one from each subunit) are exposed to the central pore of the channel.30 The gating is
assumed to take place at the narrowest region of the channel, identified as the valine (V) ring, number
15 in Figure 1 and Table II, and the actual gate as a hydrophobic region produced by the five isopropyl
moieties of the V molecules, which project into the central lumen. Agonist-induced conformational
changes rotate thesemoieties towards the lumenwall removing the barrier to themigration of cations
through the channel.31 The existence of isopropyl moieties at ring 15 is a common feature of all the aand b subunits, except for the b4 subunit (Table II). In this subunit, the V is replaced by a
phenylalanine (F) and the gate contains three phenyl rings and two isopropyl moieties.
4 . N O N - C O M P E T I T I V E - B I N D I N G S I T E S O N T H E n A C h R
To date, three major non-competitive-binding sites have been shown to exist on all subtypes of the
nicotinic receptor, namely, the central lumen, ethidium, and quinacrine-binding sites30 (Fig. 2).
Binding at these sites inhibits the receptor from undergoing agonist-induced gating in a non-
competitive, allosteric manner, and they have been characterized as NCI-binding sites. While other
NCI-binding sites have been identified, such as the steroid-binding site,30 the majority of the
compounds characterized as NCIs of the nAChR appear to bind at one of these three sites.
A. The Luminal-Binding Site
The luminal high affinity NCI-binding domain is located on the surface of the internal lumen that
forms the ion channel. The structure of the internal lumen has been studied by a variety of approaches
and these studies have been reviewed.30 Although most of the experimental data used to describe the
luminal domain were obtainedwith the muscle-type nAChR, abdg nAChR, it is believed that the keystructural components are common to the other members of the nAChR family.
The internal lumen of the nAChR has a high negative electrostatic potential.20 This domain can
be viewed as a cation selector in which NCIs bearing a positive charge, usually on an amine moiety,
are trapped and directed down the channel by an electrostatic gradient.32 While NCIs can bind at a
variety of sites along the central lumen, it is generally assumed that the non-competitive inhibition is
predominately a result of binding at site(s) near or at the V ring, position 15, which essentially plugs
the channel and blocks ion flux33 (Fig. 1). This mechanism has been used to describe the NCI
Table II. Sequence Alignment of M2 Transmembrane Section
Acrossdifferentsubunitsofneuronalnicotinicacetylcholinereceptors,whereresiduesonyellowbackgroundareexposedtothecenterofthe
channelandformrings, whichare coloredastherings in Figure1.ReprintedwithpermissionfromJozwiaketal.20Copyright 2004American
Chemical Society.
728 * MOADDEL, JOZWIAK, AND WAINER
properties of drugs such as mecamylamine,17 DM,17 bupropion,34 phencyclidine,34 and
barbiturates.35
However, experiments utilizing NCI labeling and site-directed mutagenesis have suggested that
ligands may interact with different rings distributed along the lumen.30 The possibility of multiple-
binding sites has been reflected in the results from molecular modeling studies. For example, in
simulations of docking interactions with the a7 nAChR, pentobarbital appears to primarily dock at
ring 15,35 while other ligands primarily bound to serine (S ring, position 8) and threonine (T ring,
position 4), see Figure 1, with only minor interactions with the V ring.36
1. Molecular Models of the Luminal-Binding Site
There have been several proposed molecular models of the transmembrane domain of the a7nAChR37,38 and cryo-electron microscopy images have been used to develop models of the Torpedo
marmorata nAChR (abdg nAChR).39 We have recently reported a model of the central lumen of the
a3b4 nAChR, which can be used to describe the binding and function of NCIs to this receptor.20 Themodel was based upon a synthetic 23-mer peptide, homologous to the sequence of the putative
transmembrane M2 segment of the Torpedo californica d-nAChR subunit, which spontaneously
forms discrete ion channels in liposome bilayers.40 These channels are functionally similar to the
nAChR channel including functional blockade by known nAChR NCIs. Using frozen state NMR
techniques, the structure of the synthetic channel (Protein Data Bank id ¼ 1EQ8) was shown to
consist of fivea-helical polypeptides oriented in a fivefold symmetricalmanner forming a funnel-like
architecturewith awide opening on theN-terminal side and preserving the sequence of ‘‘rings’’ along
the channel as in natural nAChRs.
This model was used as the starting point for the development of the a3b4 nAChR, and the PDBentry 1EQ8 was modified by mutating the d–M2 residues into a3 and b4 sequences as presented inTable II. The model was further refined by energy minimization and the final model was evaluated
using Procheck. The final model of the a3b4 nAChR luminal domain is depicted in Figure 3A and B.
Figure 3A shows the stereo view of the fivea-helices forming the channel and their alignment relative
to each other. Figure 3B illustrates the location of the specific amino acid rings distributed along the
channel. The internal luminal surface has ionized residues on both ends of each helix, which appear to
be responsible for ion selection of the nAChRs. Seven rings of amino acids are clearly visible along
the channel in Figure 3B. An extracellular polar ring (E/K) at the edge of themembrane is followed in
sequence by three non-polar (L, V/F, and L) and then three polar (S, T, and intermediate (E)) rings.
The cytoplasmic ring of acidic residues (see Fig. 1) was not included in our model.
As discussed above, an important feature of the a3b4 channel is the introduction of an F at
position 15 (V/F ring). This results in the formation of a defined asymmetric hydrophobic cleft
between the a3 and the b4 helices at the interface between the isopropyl and phenyl moieties
associated with Vand F, respectively, which are depicted in Figure 4. This particular feature does not
exist in non-b4 subtypes, such as the a3b2 nAChR,where the fiveV residues at this site produced less
defined hydrophobic regions (unpublished data).
2. NCI Docking in the a3b4 nAChR Luminal Domain
Themolecularmodel of thea3b4 nAChR luminal domain suggests that there are a significant number
of possible siteswhereNCIsmight bind.A series of 17NCIs and 5 negative controlswere docked into
the model of the a3b4 nAChR using AutoDock.20 The NCIs bound deep within the channel
predominantly in the non-polar region near the V/F ring. The negative control molecules formed
scattered clusters in their final docking orientations along the channel where interactions with V/F
and L rings or G ring predominated; however, there was no single dominant binding orientation
or site.
ALLOSTERIC MODIFIERS * 729
The unique pocket formed by the cleft between the phenyl ring introduced by F in the b4 subunitand the isopropyl moiety from the V in the a3 subunit was the primary-binding pocket for the
hydrophobic moieties of all of the studied NCIs. When the non-polar part of the inhibitor is included
in the hydrophobic pocket, the polar part of the ligand is able to interact with nearby polar residues
exposed to the lumen (e.g., position 8) to form hydrogen bonds. This mechanism is illustrated using
the enantiomers DM and levomethorphan (LM) (Fig. 5A and B) and is consistent with previous
docking studies with the a7 nAChR which indicate that the S at position 8 plays a role in the ligand
binding.36
Dextromethorphan (DM) and LM were chosen for the initial docking studies based upon
previous functional, chromatographic, and thermodynamic studies, which demonstrated that these
enantiomers bind enantioselectively to the a3b4 nAChR and that the observed differences were due
to an enhanced stability of the DM–a3b4 nAChR complex.20,41 In the docking simulations, the
lowest energy docked conformations of the DM and LM complexes were located at the V/F ring and
involved the insertion of the hydrophobic portion of both molecules into the hydrophobic cleft found
at this position (Fig. 5A and B).
Figure 3. Graphical representationof the finalmodelof the luminaldomainofa3b4nAChR.Thea3helicesare coloredinblue, andb4helicesare incyan.Theresidues liningthe lumenofthechannelareshownexplicitly.Chargedresiduesareshowninredandblue.Hydrophobic residues are shown in green. Hydrophilic residues are shown in orange, and the phenylalanine from b4 is shown inblue: (A) topview instereomode (intracellular side)withexposedresidues rendered inwireframemode; (B) side viewof the channel
with the a3, b4, and a3 helices shown from left to right.Two of the b4 helices have been removed for clarity. Exposed residues arerendered in CPKmode.Labels show thenumberingof ringsaccording toTable III. See reference [20] fordetails.
Figure 4. Thehydrophobicpocket identifiednear theV/Fring inthe�3b4 subtypeof theneuronalnicotinicacetylcholine receptor;the figure renderedwithmolecularareaandonehelix hasbeen removed for clarity. [Color figure canbe viewed in the online issue,
which is availableat www.interscience.wiley.com.]
ALLOSTERIC MODIFIERS * 731
The mirror image relationship between the two enantiomers and their lack of conformational
mobility produce two unique orientations, which result in distinctly different interactionswith nearby
amino acidmoieties comprising the lumen. In the case ofDM(Fig. 5A), the bridgehead nitrogen atom
was oriented towards the hydroxyl moiety on the S residue (position 8) located on the a3 helix,
thereby increasing the probability of H-bond formation between the two moieties. With LM, the
bridgehead nitrogen atomwas pointing away from the two helices forming thea3 andb4 subunits dueto the steric considerations, thereby reducing the probability and strength of any H-bond interaction
(Fig. 5B). The calculated difference in methorphan–nAChR complexes, DDG(n) derived by
DGDM�DGLM, was�0.33 kcal/mol in favor of DM. This difference is in agreement with the value
obtained from van’t Hoff studies conducted using an immobilized a3b4 nAChR liquid
chromatographic stationary phase in which observed DDG� was �0.29 kcal/mol.41
Based upon the results from the docking experiments, the V/F cleft appears to play a key role in
the enantioselective binding of DM and LM to the a3b4 nAChR. This particular hydrophobic pocketis a unique feature of the a3b4 nAChR and should differ from the binding area produced by the V/V
Figure 5. The molecular model of dextromethorphan (A) and levomethorphan (B) docked at theV/F ring of the �3b4 neuronalnicotinic acetylcholine receptor. [Color figure canbe viewed in the online issue, which is availableat www.interscience.wiley.com.]
732 * MOADDEL, JOZWIAK, AND WAINER
moieties present in the non-b4 containing nAChR subtypes. This hypothesis is consistent with the
observed differences in pharmacological responses. In general, receptors containing the b2 subunitdesensitize faster than those containing the b4 subunit.42 Papke and co-workers have also reported
that the recovery from non-competitive inhibition by mecamylamine appears to be a single
exponential process for receptors containing the b2 subunit and more complex for a3b4 nAChRs.16
In the case of the a3b4 nAChR, the recovery occurred in two phases, one of which took over 30 min.
3. Applying the a3b4 nAChR Model to In Silico Drug Discovery
Non-competitive inhibitors (NCIs) that bind in the central lumen of the nAChR are assumed to
sterically block the channel, thereby preventing ion flux.33However, the results of the docking studies
suggest that at least in the case of the a3b4 nAChR, non-competitive inhibition is due to an alternative
mechanism. The free energies of binding (DG� values) for DM and LMwith the a3b4 nAChR in the
desensitized state were �8.73 and �8.40 kcal/mol, respectively, and the DG� value calculated for
the mecamylamine, a prototypical NCI, was �6.41 kcal/mol.20 Since the agonist-induced gating
of the nAChR has been described as an organized and sequential movement of segments of the
protein,27,31 it is reasonable to assume that formation of the NCI–nAChR complex increases the
energy of activation required to produce the conformational changes required in the gating process.
Thus, the binding of a NCI does not physically block the ion channel, but instead acts as a wedge,
essentially freezing the nAChR in a closed conformation.43
Since previous studies have associated the length of inhibitory activity of an NCI with the
stability of the NCI–nAChR complex,22,41 the molecular model of the a3b4 nAChR can be used to
design compounds with extended therapeutic activity. In addition, the results from the study of the
enantioselective interaction of DM and LM with the a3b4 nAChR demonstrate that for this class of
compounds, the increased stability of the DM relative to the LM is due to more efficient hydrogen
bonding interactions between the ammoniummoiety on themorphinan ring and the hydroxyl moiety
on the S molecule at position 8.20
Based upon these observations, one route to a more effective NCI of the a3b4 nAChR would be
to alter the molecular structure of DM in order to enhance hydrogen bond formation. This could be
accomplished by transforming the methyl group attached to the bridgehead amine into a longer
moiety with hydrogen bond acceptors. Three possible structures were designed and docked into
the a3b4 nAChR model, and the predicted DG values were determined (Table III).44 The results
of the docking simulations were consistent with the proposed approach. Compound DM-01 was
synthesized, and was an active inhibitor of nicotine-induced 86Rbþ efflux in a cell line that expressed
the a3b4 nAChR with an IC50 value of 22 mM.44
The internal surface of the lumen domain is highly electron rich,20 a feature that appears to be
responsible for the cation selectivity as well as for strong interactions with positively charged NCIs.
This aspect of the NCI–nAChR interaction can also be used in drug design to affect pharmacological
properties. An increase in the total negative charge on a molecule should reduce the stability of the
compound–nAChR complex and the pharmacological effect of the compound, while the opposite
effect should be produced by increasing the total positive charge on the molecule.
The effects of changes in molecular polarity are illustrated by the changes in the IC50 values and
dissociation rate constants (kd) of DM produced by N-demethylation, O-demethylation, and N,O-
didemethylation (Table IV, Fig. 6). The kd values were obtained using NLC on a column containing
immobilizedmembranes obtained from a cell line that expressed thea3b4 nAChR.20 In this study, thekd values of the O-demethylated compounds, dextrorphan and (þ)-3-hydroxymorphinan, were
twofold higher than those of the mexthoxy-containing analogs, DM and (þ)-3-methoxymorphinan.
These results were attributed to the fact that under the experimental conditions, the phenoxymoieties
of the dextrorphan and (þ)-3-hydroxymorphinan were partially ionized, and the additional negative
charge, relative to DM, destabilized the dextrorphan and (þ)-3-hydroxymorphinan nAChR
ALLOSTERIC MODIFIERS * 733
complexes relative to the complex formed by DM. In the case of (þ)-3-methoxymorphinan, N-
demethylation slightly increased the net positive charge on the molecule relative to DM but did not
alter the relative stabilities of the DM–nAChR and (þ)-3-methoxymorphinan–nAChR complexes.
The chromatographic results were reflected in the IC50 values obtainedwith the cell lines used to
create the affinity column.21 In these studies, O-demethylation increased the IC50 values, thereby
reducing the effectiveness of dextrorphan and (þ)-3-hydroxymorphinan, relative to DM, while the
N-demethylation of DM did not change the observed IC50 (see Appendix and Table IV). There was
Table III. Molecules Designed to Inhibit a3b4-nAChR Followed by DG� Values Obtained in
Docking Simulations (Reference DG of Dextromethorphan ¼ �8.73 kcal/mol)
Structure Compound ∆ G o
dextromethorphan
N
O
H -8.73 kcal/mol
DM-01 N
O
H
O
-9.09 kcal/mol
DM-02 N
O
H
O
-9.35 kcal/mol
DM-03 N
O
H
O
-10.31 kcal/mol
Table IV. Chromatographically Determined Dissociation Rates (kd) for the
Complexes between the a3b4 nAChR and Dextromethorphan and Three of its
Metabolites
Compound kd
(sec -1 ) IC 50
( µ µ M) Percent recovery
(7 min) Dextromethorphan 1.0 10.1 51
Dextrophan 2.3 29.6 (+)-3-Hydroxymorphinan 2.0 59.7 102 (+)-3-Methoxymorphinan 1.0 10.3
Determined using a liquid chromatography stationary phase containing immobilized cellular membranes
obtained fromthe KXa3b4R2 cell line, and functional inhibition (IC50 values) andpercent inhibition 7minafter
washoutdeterminedusingtheKXa3b4R2cell line.
734 * MOADDEL, JOZWIAK, AND WAINER
also no significant difference between the IC50 value of verapamil and itsN-demethylatedmetabolite,
norverapamil, or between dilitiazem and N-desmethyldilitiazem (see Appendix).
In addition, O-demethylation of DM reduced the length of the pharmacological effect.22 At
7 min, DM continued to have a significant effect on nAChR activity (only 50% of the initial activity
had been recovered), while there was no residual effect of (þ)-3-hydroxymorphinan (Table IV).
The results of these studies demonstrate that the model of the central lumen of the a3b4 nAChRand docking simulations can be used to manipulate molecular structures to increase or decrease
interactions with this receptor. If an NCI is the desired compound, then themolecule can be altered to
increase either the hydrophobic or hydrogen bonding interactions, or both. If non-competitive
inhibition of the nAChR is an unwanted effect, then the electronegativity of the compound can be
increased in order to decrease the interactions with the nAChR.
B. The Ethidium-Binding Site
In 1987, Herz and co-workers identified a single, high-affinity, non-competitive-binding site for the
quaternary amine ethidium on the a(2)bgd nAChR isolated from the Torpedo californica.45 This site
has been described as a polyamine-binding site46 and studies using fluorescence titration and
photoaffinity-labeling have indicated that ethidium binds in the outer vestibule of the central lumen
about 46 A above the transmembrane portion of the receptor30,47 (Fig. 2).
Structure–activity relationship (SAR) studies have been used to identify the structural elements
related to NCI activity at the nAChR.46 In these studies, a series of compounds were synthesized
based upon the polyamine philanthotoxin structure, a family of NCIs isolated from wasp venoms,
which act as NCIs. The results of the study indicate that high affinity binding at the ethidium site is
associated with hydrophobic head groups and polyamine side chains.
While the ethidium-binding site has been extensively studied, only a few marketed
pharmaceuticals have been identified as binding at this site. The most important of these drugs are
chlorpromazine and clozapine.48 It is also likely, but unproven, that the neuromuscular blocking
agent atracurium binds at this site. It is of interest to note that at low concentrations, atracurium is an
agonist, while at higher concentration, it displays both competitive and non-competitive inhibition
with the a7 and a4b2 nAChRs, and only non-competitive inhibition with the a3b4 nAChR.49
N
O
CH3
CH3
H
NCH3
HO
H
N
OCH3
H
N
HO
H
dextromethorphan
(+)-3-methoxymorphinan
dextrorphan
(+)-3-hydroxymorphinan
Figure 6. Structuresofdextromethorphanand its demethylatedmetabolites.
ALLOSTERIC MODIFIERS * 735
Laudanosine, a metabolite of atracurium, also displays agonist, competitive antagonist, and NCI
properties,49 but most probably binds in the central lumen of the nAChR.49,50
C. The Quinacrine-Binding Site
The primary-binding site for the antimalarial agent quinacrine has been identified in the non-annular
lipid domain on the border between the nAChR and themembrane, and not in the luminal domain30,51
(Fig. 2). Using a series of spin-labeled state isomers and quinacrine fluorescence quenching, it
appears that the site is �7–12 A below the aqueous–lipid interface.30
At the present time, quinacrine is the only marketed pharmaceutical that has been identified as
binding at the quinacrine-binding site.30 This is most probably due to the experimental difficulties
associated with the determination of binding to this site. However, displacement chromatography on
an a3b4 nAChR column and cellular inhibition studies employing the cell line used to create
the chromatographic column demonstrated that the morphine derivatives buprenorphine and
naltrindole were NCIs of the a3b4 nAChR, with IC50 values of 13 and 28 mM, respectively, and that
these compounds bound at the quinacrine site on this receptor [unpublished data]. Thus, the
chromatographic approach appears to be a simple and direct method to determine whether a
compound binds at the quinacrine site. This technique is being applied to the study of a number of
known nAChR NCIs and the results may increase the importance of the quinacrine-binding site as a
target for drug discovery and a source of unexpected side effects.
5 . S Y N T H E S I S A N D C H A R A C T E R I Z A T I O N O F T H En A C h R S T A T I O N A R Y P H A S E
A. Liquid Chromatography Stationary Phases Containing Immobilized Proteins
Affinity chromatography is awell characterized and studied technique that has been primarily used as
a method to isolate and purify proteins, c.f.52 The standard experimental approach is to immobilize a
known ligand or an antibody on a chromatographic support and to use the resulting column to
chromatographically isolate target proteins from cellular lysates or incubates. However, Chaiken53
and Carr54 demonstrated that cytosolic proteins and enzymes could also be immobilized and used to
study ligand–protein interactions.
In 1996, Lundahl et al.55 reported the development of a chromatographic column containing a
transmembrane protein, the GLUT1 glucose transporter. This column had been created through the
entrapment of red blood cell membranes in proteoliposomes. Frontal affinity chromatography
techniques were used to demonstrate that the immobilized GLUT1 actively bound substrates and
inhibitors and that this technique could be used to determine binding affinities, Kd values. This
approach has been recently reviewed.56
Building on the work by Lundahl and co-workers, we have developed a series of liquid
chromatographic stationary phases containing immobilized cellular membrane fragments obtained
from cell lines expressing a target receptor, ion channel, or transporter. These phases have been based
upon the immobilized artificial membrane (IAM) stationary phase developed by Pidgeon et al.57 and
have included membranes containing opioid G-protein coupled receptors (GPCRs),58 b2-adrenergicGPCR,59 nAChRs,43,60 the drug transporter P-glycoprotein (Pgp),61,62 and the human organic cation
transporter-1 (hOCT1).63
The technology is not limited to a particular protein or family of proteins or a particular cell line.
For example, nAChRs were obtained from transfected HEK-29343 and SH-EP1 cell lines
[unpublished data], the organic cation transporter from a MDCK cell line,63 and the Pgp transporter
from a LCC-6 cell line.61,62 The binding capacities of the resulting columns depend upon quantity of
the immobilized functional protein, which is determined by the level of expression of the target
736 * MOADDEL, JOZWIAK, AND WAINER
protein and the amount of the solubilized target protein. For example, the amount of cells required to
produce functional nAChR columns ranged from 1� 106 (a3b4 subtype)43 to 30� 106 (a7 subtype)[unpublished data].
In addition to cellular membranes, solubilized tissues can also be used to produce functional
affinity columns. For example, solubilized brain tissue was used to create a stationary phase that
contained co-immobilized nAChRs, g-amino-butyric acid receptors, and N-methyl-D-aspartate
receptors.64
B. Immobilization of nAChRs
Avariety ofmethods have been used to immobilize nAChR-containingmembranes. In one approach,
membranes from the Torpedo marmorata were immobilized on the surface of a gold Biacore chip
using phospholipids composed of a hydrophilic polyethyleneglycol spacer and a terminal thiol
moiety in the lipid headgroup.65 The lipid bilayerwas anchored to the gold surface of the chip through
sulfur–gold bonds. The resulting complex was used in surface plasmon resonance experiments to
quantify the binding of ligands and antibodies to the nAChR.
Cellular membranes containing the a3b4 nAChR have also been sterically entrapped in
Superdex beads60 and membranes from the Torpedo californica have been immobilized in sol–gel-
derived silicamaterials.66However, themost extensive studies on immobilized nAChRcolumns have
been conducted using IAM-immobilized membranes and columns have been created from cell lines
expressing the a3b2 nAChR, a3b4 nAChR, a4b2 nAChR, and a4b4 nAChR.43
C. Characterization of the Immobilized nAChR Stationary Phase
The initial characterization of the immobilized nAChR stationary phases has been accomplished
using frontal affinity chromatography. This technique is used to characterize the binding of small
molecules to the immobilized membrane-bound target (the nAChR) and to determine binding
affinities (Kd) and the number of active binding sites on the column (Bmax). A key requirement of this
approach is the existence of a compound which is known to bind to the target, the marker ligand. In
frontal affinity chromatography, the marker ligand is placed in the mobile phase and passed through
the column. The frontal regions are composed of the relatively flat initial portion of the
chromatographic traces, which represent the non-specific and specific binding of the marker to
the cellular membranes and the target. The saturation of the target by the marker produces a vertical
rise in the chromatographic trace, which plateaus when the target is saturated.
Typical chromatograms of 60 pM [3H]-labeled epibatidine ([3H]-EB) obtained using frontal
chromatography techniques on an a3b4 nAChR stationary are presented in Figure 7.60 The
chromatographic traces produced by 60 pM (Fig. 7, Curve A) and 450 pM [3H]-EB (Fig. 7, Curve B)
illustrate the effect on concentration on retention and demonstrate that the frontal chromatograms
were produced by a specific binding interaction.
Once it has been established that the immobilized target specifically binds themarker ligand, it is
possible to calculate Kd values of the marker or other ligands for the target receptor using
displacement chromatography. In the displacement studies, increasing concentrations of the marker
or other test ligands are added to the mobile phase and the effects on the retention volumes, measured
at the midpoint of the breakthrough curves, are determined. This is illustrated by the effects on the
chromatographic traces produced by 60 pM [3H]-EB produced by the addition of 60 nM nicotine
(Fig. 7, Curve C), and 1,000 nM nicotine (Fig. 7, Curve D).
The relationship between displacer concentration and retention volume can be established using
Equation 1 and can be used to determine the Kd value of the displacer and the number of active
binding sites, Bmax;55
½Nic�ðV� VminÞ ¼ Bmax½Nic� ðKdNic þ ½Nic�Þ�1 ð1Þ
ALLOSTERIC MODIFIERS * 737
where Vis retention volume of Nic; Vmin, the retention volume of Nic when the specific interaction is
completely suppressed (this value can be determined by running [3H]-EB with a high concentration
of displacer). From the plot of [Nic] (V�Vmin) versus [Nic], dissociation constant values, Kd, forNic
can be obtained. The data is normally analyzed using non-linear regression employing a standard
program such as Prism 4 software (Graph Pad Software, Inc., San Diego, CA) running on a personal
computer.
The Kd and Bmax values obtained for known nicotinic ligands obtained using columns produced
from cell lines expressing the a3b2 nAChR, the a3b4 nAChR, the a4b2 nAChR, or the a4b4 nAChRsubtypes are presented in Table V.43 The results demonstrate that frontal affinity chromatography can
not only be used to calculate Kd values on a specific target, but can also be used to distinguish binding
affinities between closely related subtypes of the same target.
The Kd values calculated using the chromatographic method were generally lower than the
corresponding values determined from the membrane-binding studies.43 However, while the Kd
values differed, linear regression analysis showed that the two data sets correlated with an
r2 ¼ 0.7952 (P < 0.0001), indicating that the observed differences were quantitative not qualitative.
The Bmax values are also reported in Table V. The calculated Bmax values represent the total
number of active binding sites available on the column and are directly related to the binding capacity
of the column. Since the level of expression of the nAChR subtypes varies between the cell lines and
since the number of cells used in the experiments ranged from1� 106 to 3� 106, the number of active
binding sites on each column is not equal. In fact, the Bmax values can vary between columns of the
same subtype.
0
25
50
75
100
3020100
Rentention volume (ml)
[Epi
batid
ine ]
(% o
f pl
atea
u)
ACBD
Figure 7. The elutionprofilesof [3H]-epibatidineon�3b4NR-IAM stationaryphase, where A ¼ 60 pM,B ¼ 450 pM,C ¼ 60 pM
[3H]-epibatidine in the presence of 60 nM (�)-nicotine; D ¼ 60 pM [
3H]-epibatidine in the presence of 1,000 nM (�)-nicotine.
Reprinted fromZhangetal.60Copyright1998, with permission fromElsevier.
Table V. Binding Affinities (nM) and Bmax Values Calculated by Frontal Affinity
Chromatography Using the Immobilized Nicotinic Receptor Columns
αα3β2 α3β4 α4β2 α4β4 Epibatidine 0.086 (0.57) 0.001 (0.035) 0.042 (0.16) 0.005 (0.061)
Nicotine 16.4 (10) 80 (440) 2.18 (47) 0.387 (40)
Cytisine 0.237 (2.1) 6.09 (1.5) 7.6 (220) 2.43 (37)
Bmax 13.5 fmol 24.3 fmol 572 fmol 4.76 fmol
Compared tobindingaffinitiescalculatedby filtrationassays inparentheses, seereference [43] fordetails.
738 * MOADDEL, JOZWIAK, AND WAINER
Most cellular or membrane binding studies utilizing the nAChR are carried out using the ‘‘high
affinity’’ or desensitized state of the receptor, which is produced by exposure of the receptor to an
agonist. It was of interest to determine if the immobilized nAChRs were in the resting or desensitized
states and if exposure to an agonist would produce a conformational shift from one state to the other.
A study was performed comparing the retentions of luminal NCIs on freshly prepared nAChR
columns and after the columns were exposed to EB.43 The results demonstrated that the membranes
obtained from the expressed cell lines contained nAChRs that were predominantly in the resting state
and that exposure to EB shifted the population to the higher affinity desensitized state. Thus, the
immobilization process did not affect the conformational mobility of the membrane bound nAChRs,
although the transition from desensitized to resting statewas significantly slower for the immobilized
receptors relative to the intact cells.
6 . N O N - L I N E A R C H R O M A T O G R A P H Y
The shape of a chromatographic peak is the function of the specific and non-specific interactions
between the solute and the stationary phase. In particular, the kinetics involved in the formation and
dissolution of the solute-stationary phase complex, that is, the association and dissociation rate
constants, ka and kd, respectively. When the stationary phase contains an immobilized protein, the
dissociation of a ligand–protein complex is usually slower than the rate of complex formation
producing non-Gaussian peaks with tailing.
The degree of deviation from a Gaussian distribution is a function of applied ligand
concentration and the kinetics of ligand–receptor interactions occurring during the chromatographic
process. An example of the effect of solute concentration on peak shape is presented in Figure 8,19 in
which increasing concentrations of the NCI mecamylamine were chromatographed on an a3b4nAChR column.
Concentration-dependent asymmetry can be used with NLC techniques to characterize the
separation processes occurring on the column. The first formulation of non-linear conditions in
chromatography was derived by Thomas67 and this approached was labeled ‘‘quantitative affinity
chromatography’’ in a review by Jaulmes and Vidal-Madjar.68 In 1987, Wade et al.54 developed the
Impulse Input Solution for the mass balance equation. This approach is based upon the observation
0 5 10 15 20 25 30 35 40time [min]
1
2
5
10
20
50
100
200
500
1000
Figure 8. The effect of increasing concentraions of mecamylamine, from 1 to 1,000 mM, on the chromatographic profiles of
mecamylamine.Forexperimental details, see reference [19].
ALLOSTERIC MODIFIERS * 739
that when adsorption/desorption rates are slow, band broadening is insensitive to a moderate degree
of column overload. In contrast to numerical integration methods, this approach uses the analytical
solution, which can be applied directly to fit experimental peak profiles. The Impulse Input Equation
has been included in PeakFit v4.11 forWindows Software (SPSS, Inc., Chicago, IL) and can be easily
applied to NLC studies.
The mathematical approach used in the Impulse Input Solution for the NLC is described by
Equation 2 (PeakFit User’s Manual, p. 8–25):
y ¼ a0
a31� exp � a3
a2
� �� � ffiffiffia1x
pI1
2ffiffiffiffiffia1x
p
a2
� �exp �x�a1
a2
� �
1� T a1a2; xa2
� �1� exp � a3
a2
� �h i24
35 ð2Þ
where
y—Intensity of signal,
x—Reduced retention time,
Tðu; vÞ ¼ expð�vÞZu
0
expð�tÞI0 2ffiffiffiffivt
p� dt
The T function acts as a ‘‘switching’’ function, which produce the skew in the peak profile when the
column is overloaded.
I0( ) and I1( ) are Modified Bessel functions,
a0—Area parameter,
a1—Center parameter, reveal to true thermodynamic capacity factor,
a2—Width parameter,
a3—Distortion parameter.
Once the NLC parameters have been established, they can be further processed for the
calculation of the k 0, Ka, ka, and kd values. These parameters were calculated using the following
relationships (PeakFit User’s Manual, p. 8–26):
k 0 ¼ a1—Real thermodynamic capacity factor, kd ¼ 1a2t0
—Solute desorption constant rate (t0 is the
dead time of a column),Ka ¼ a3C0—Equilibrium constant for adsorption (C0 is a concentration of
solute injected multiplied by a width of the injection pulse (as a fraction of column dead volume)),
ka ¼ kd ¼ Ka—Solute adsorption constant rate.
The application of NLC to the characterization of the interactions between NCIs and the
immobilizeda3b4 nAChRwas established using theNCIs ketamine, bupropion,mecamylamine, and
DM.19 The k 0(NLC), Ka, kd, and ka values calculated using the NLC parameters are presented in
TableVI. Once a column has been characterized usingNLC techniques, the concentration-dependent
studies do not have to be repeated for each text compound and a single concentration can be used to
establish the relative Ka, kd, and ka values.
A. Using NLC to Identify and Characterize NCI
1. Direct Determination of IC50 Values
It is commonly accepted that affinity chromatography can be used to derive binding affinities, which
can be correlated to data obtained using standard techniques such as membrane binding,
ultrafiltration, and equilibrium dialysis.69,70 It is also assumed that this technique is not applicable
to the direct determination of functional activities, such as IC50 or EC50 values. This may be partially
740 * MOADDEL, JOZWIAK, AND WAINER
explained by the fact that the binding affinity of the drug towards the receptor is not necessarily
directly related with the efficacy of this drug acting on the pharmacological target.
However, the relationship between binding affinities and functional properties has been
established for competitive inhibitors of enzymes by Cheng and Prusoff.71 In this approach, the
binding affinity of the inhibitor (Ki), the functional strength of the inhibitor (IC50 value), and the EC50
of a specific marker agonist are related in the following manner:
Ki ¼I50
1þ SKm
� � ð3Þ
where I50 is the IC50 value, S is the concentration of the substrate (ormarker ligand), Km is the affinity
of the substrate (or maker ligand) for the target. This approach has also been used with receptors to
relate binding affinities and antagonist activity (Ki and IC50) and agonist activity (Kd and EC50).
Recently, we have demonstrated that the Cheng–Prusoff relationship can also be used with
affinity chromatography techniques to directly assess relativeEC50 values.72 These studies useda3b4
nAChR and a4b2 nAChR columns and single frontal displacement chromatography experiments.
The displacement of [3H]-EB by each of nine test compounds and two internal controls, nicotine and
carbachol, was calculated and expressed as Dml. Nicotine was used as an internal control for
compounds with agonist activity, and carbachol was used as an internal control for compounds with
veryweak agonistic activity. Since the concentration of themarker ligandwas a 1,000-fold lower than
the displacer, Equation 3 reduced to Affinity (Kd), expressed asDml, is equivalent to activity (EC50).
The test compounds were ranked using the Dml values relative to the Dml of nicotine and carbachol
(Table VII), and the corresponding EC50 values were confirmed using the nicotine-stimulated 86Rbþ
efflux assay and the cell line expressing the a3b4 nAChR.
Unfortunately, the Cheng–Prusoff relationship cannot be used with NCIs, and it was necessary
to develop an alternative method for the online estimation of relative antagonistic activities,
expressed as IC50 values. This was accomplished using NLC, chemometric and multivariate
analyses.21 In this approach, NLC retention values, k 0, were obtained for 29 compounds on an a3b4nAChR, and the corresponding molecular descriptors EHOMO and SYZ were generated (Table VIII).
EHOMO is the energy of the highest occupied molecular orbital and SYZ is the surface area of the
molecular projection onto the YZ plane. The two data sets were related using Equation 4, which had
been previously described.20
log k ¼ 5:255 ð�0:942Þ þ 0:491 ð�0:092ÞEHOMO þ 0:012 ð�0:005ÞSYZr ¼ 0:984; s ¼ 0:168; F ¼ 27:929; n ¼ 17
ð4Þ
The IC50 values for used in the study were also determined using nicotine-induced 86Rbþ efflux from
KXa3b4R2 cells (Table VIII). Linear regression analyses were used to compare IC50 values with log
k, EHOMO, and SYZ. No statistically significant relationships were observed (all P-values >0.05).
Table VI. Non-Linear Chromatography (NLC) Parameters Designated as Retention Factor (k 0NLC),
EquilibriumConstants for Adsorption (Ka), Association Rate Constant (ka), andDissociation Rate Constant (kd)
k’Compound NLC Ka (µµM-1 k) a (µM-1 sec-1) kd (sec-1)4.8 19.7 4.2 17.0 mecamylamine 6.9 15.0 2.3 12.0 Ketamine 5.8 10.5 1.8 14.0 bupropion
82.0 dextrometnorphan 0.8 16.7 20.1 Calculatedfor the interactionofmecamylamine, ketamine,bupropion,anddextromethorphanwithanimmobilizeda3b4nAChRstationaryphase.Seereference [19] fordetails.
ALLOSTERIC MODIFIERS * 741
However, a visual examination of a 3-D scatterplot of the chromatographic and molecular
parameters suggested that theNCIs could be subdivided into three separate clusters (Fig. 9). This was
confirmed usingmultidimensional cluster analysis, which is designed to specifically identify patterns
within multivariate datasets. The object was to sort cases into groups, or clusters, such that the degree
of association is strong betweenmembers of the same cluster andweak betweenmembers of different
clusters. Each cluster thus describes the class to which its members belong, and this description may
be abstracted through use from the particular to the general class.
The analysis identified three distinct clusters, which represents a qualitative grouping of
functional properties in which Cluster 1 contained compounds with IC50 values 1.9–3.0 mM, Cluster
2 contained compounds with IC50 values ranging from 7.0 to 139.7 mM, and Cluster 3 contained
compounds with IC50 values ranging from 1.0 to 6.6 mM21 (Table VIII, Fig. 9A).
The initial 19 test compounds contained 2 calcium channel blockers, verapamil and diltiazem,
and norverapamil, a primary metabolite of verapamil, and the data demonstrated that these
compoundswere efficient NCIs of the a3b4 nAChR (Table VIII). In order to further explore this class
of drugs and to validate the model, four additional calcium channel blockers (compounds 25, 27, 28,
29), five metabolites of diltiazem (compounds 20–24), and one additional metabolite of verapamil
(compound 26) were chromatographed on the a3b4 nAChR. The log k and molecular descriptors
were calculated for each compound (Table VIII) and used in the cluster analysis. The cluster analysis
placed compounds 20, 21, 23, 25, 27, and 28 in Cluster 1 and compounds 22, 23, 26, and 29 in Cluster
2 (Fig. 9B). The IC50 values for the compounds were then determined and 8 of the 10 compounds had
been placed in the correct cluster (Table VIII).
The molecular descriptors identified in the previous non-linear chromatographic study are
consistent with this mechanism, where EHOMO reflects the ability of the compound to transfer a
proton to the carboxylate moiety and SYZ is associated with the entrance of the compound into a
defined steric environment.20 The thermodynamic retention factor, k, reflects the equilibrium
between the initial binding of the compound to the nAChR, ka, and the stability of the final NCI–
nAChR complex, kd. All of these steps contribute to the observed IC50 value. Thus, it is not surprising
that linear regression analyses between only one of these factors and the IC50 values did not work,
while cluster analysis using all the three variables was able to identify populations with qualitatively
similar IC50 values.
Table VII. Comparison between theAgonist Activity of ConstrainedNicotine
and Anabasine Derivatives (TKS 1–9), Expressed as the EC50 Value
Sample EC50 [µµM] ∆ mL α3β4 ∆ mL α4β2
3H-EB (28.3 ± 1.6) x 10-3 -- ---- TKS-9 26.4 ± 1.8 0.34 1.60 TKS-6 20.8 ± 2.9 0.28 0.28
0.26 0.28 > 300 TKS-8 TKS-7 13.8 ± 3.0 0.20 0.24 Nicotine 19.8 ± 1.6 0.26 0.16 TKS-2 18.2 ± 3.4 -0.05 0 Carbachol >1000 -0.06 -0.04
-0.07 -0.04 >1000 TKS-4 0.17 -0.04 >1000 TKS-1 0.13 -0.12 >1000 TKS-3 0.18 -0.32 >1000 TKS-5
Determinedusingacell line expressingthea3b4neuronalnicotinicacetylcholinereceptor (a3b4nAChR)and their effect on the retentionof epibatidine (EB) in single displacement experiment, expressedasDml,calculatedasbreakthroughvolume of EBaloneminus thebreakthroughvolumeof EBafter theaddition
of the test ligand, on the immobilized a3b4 nAChR and a4b2 nAChR liquid chromatography stationary
phases.Seereference [72] fordetails.
742 * MOADDEL, JOZWIAK, AND WAINER
The results of the study demonstrate that the experimental approach can be used to directly relate
chromatographic retention on an nAChR column to IC50 values obtained using the same cell line used
to construct the column. In addition, it took less than aweek to obtain the chromatographic data using
a single nAChR column, which was stable for>6months, and an automated LC–MS system. This is
in contrast to the 6weeks required to complete the functional studies for 18 compounds. These results
suggest that the chromatographic approachmay be useful in development of lead drug candidates that
act as NCIs of the nAChR and in the assessment of the probability of unexpected clinical toxicities
arising from off-target binding to the nAChR.
2. Direct Determination of NCI–nAChR Dissociation Rates Constants
The dissociation of a ligand–receptor complex plays a key role in the pharmacological effect of the
ligand. Thus, the ability to rapidly determine dissociation rate constants, kds, is an important addition
to drug discovery programs. Currently, stopped-flow analysis is the predominant method used to
determine pharmacologically relevant kds. While this technique is well known and accepted, it can
Table VIII. IC50 Values, Logarithm of Thermodynamic Retention Factors (log k)
and Molecular Descriptors (EHOMO and SYZ) and Assigned Clusters
logk Compound E HOMO S YZ Cluster IC 50
[ µ M] Methadone 1 1.9 1 66.6 -9.20 1.65 Diltiazem 2 2.3 1 62.3 -8.66 1.64 Norverapamil 3 2.6 1 69.1 -9.12 1.99 Verapamil 4 3.0 1 69.4 -9.04 1.98 Dextromethorphan 5 10.1 2 51.1 -8.72 1.79 Levomethorphan 6 10.9 2 52.7 -8.74 1.55 Dextrorphan 7 29.6 2 50.9 -8.77 1.43 (+)-3-hydroxy-mophinan 8 10.3 2 49.8 -8.78 1.75 (+)-3-methoxy-morphinan 9 54.2 2 49.3 -8.83 1.42 Clozapine 10 28.0 2 44.5 -7.69 2.19 Laudanosine 11 139.7 2 50.1 -8.54 1.36 Phencyclidine 12 7.0 2 51.6 -9.05 1.38 Adamantadine 13 3.4 3 35.4 -9.71 0.95 Bupropion 14 1.4 3 34.2 -9.51 1.11 Ketamine 15 1.4 3 42.5 -9.49 0.92 Mecamylamine 16 1.0 3 40.2 -9.22 1.04 Memantine 17 6.6 3 42.3 -9.71 1.22 Methamphetamine 18 401.2 3 27.8 -9.39 0.92 MK-801 19 26.6 3 43.0 -9.11 1.28 N-demethyl-diltiazem 20 4.2 1 66.5 -8.65 1.61 deacetyl-diltiazem 21 30.4 1 62.4 -8.58 1.60 N-demethyl-deacetyl- 22 diltiazem
77.6 2 57.4 -8.58 1.61
O-demethyl-deacetyl- 23 diltiazem
73.2 1 61.8 -8.41 1.45
N,O-didemethyl-deacetyl- 24 diltiazem
63.1 2 58.1 -8.65 1.48
galapamil 25 6.4 1 66.3 -9.05 1.88 D-620 26 (verapamil metabolite)
48.9 2 48.5 -9.35 1.25
nicardipine 27 2.5 1 65.2 -8.84 2.33 amlodipine 28 5.8 1 62.9 -8.72 2.00 nifedipine 29 24.7 2 58.4 -8.63 1.27
Determinedusing3-Dclusteranalysisofthe logk,EHOMO,andSYZvalues.Seereference [21] fordetails.
ALLOSTERIC MODIFIERS * 743
also be technically challenging and lengthy. Surface plasmon resonance techniques have also been
used to determine kd values of a variety of receptors including nAChRs. In the case of the nAChRs, the
study involved the immobilization of a characterized nAChR ligand, a bungarotoxin, the
solubilization of the nAChRs contained in Torpedo membranes, and their reconstitution in lipids
before screening.73
The binding kinetics of agonists to membrane-bound ligand gated ion channels, such as the
nAChR, have also been studied using electrophysiological approaches.74,75 However, the patch-
clamp techniques used in these studies are technically difficult and require multiple experiments.
Thus, this approach is also not easily adapted to the rapid screening of compound libraries.
As discussed above {see Section 4.A.3}, NLC techniques can be used to assess the kd values
associated with the binding of NCI to immobilized nAChRs. In particular, the chromatographically
determined kd values for DM (1.01 s�1) and LM (1.55 s�1) were compared to the percent recovery of
nicotine-stimulated [86Rbþ] efflux in a KXa3b4 cell line at 7 min post-NCI exposure, DM 38%, LM
63%.41 This comparison suggested that chromatographically determined kd values could be used to
assess the length of the inhibitory effect of NCIs on the pharmacological function of the nAChR. This
hypothesis was confirmed by a comparison of the chromatographically determined kd values of 12
NCIs of the a3b4 nAChR with the corresponding percent recovery of nicotine-stimulated [86Rbþ]
efflux at 7 min post-NCI exposure in intact KXa3b4 cells.22
In the study, the chromatograms from the NLC studies were analyzed using Equation 3 to
determine the kd values for each test compound as were the corresponding percent recoveries
(Table IX). The data sets were compared using Microsoft Excel and a non-linear correlation was
Figure 9. The results from the cluster analysis using the log k, EHOMO and SYZ parameters; where (A) are the results from the first
19 compounds; (B) are the results of the application of the cluster analysis to the test cohort of 10 calcium channel blockers and
theirmetabolites.Seereference [21] fordetails. [Color figurecanbeviewedintheonline issue,which isavailableatwww.interscience.
wiley.com.]
744 * MOADDEL, JOZWIAK, AND WAINER
observed with an r2 value of 0.7458 (P ¼ 0.0048) (Fig. 10). The data was also tested for statistical
significance using a Spearman correlation and the two-tailed P-value was <0.001. This established
that NLC can be used to determine kd values which can be related to pharmacological activity.
However, it is reasonable to question whether at 7 min the difference between 100% recovery of
Figure 9. (Continued )
Table IX. Dissociation Rate Constants (kd) Determined
Using Non-Linear on an Immobilized a3b4 nAChR
Column and Percent Recovery of Nicotine-Induced
[86Rbþ] Efflux in KXa3b4 Cells 7 min after Exposure
to the Compounds
kName of compound d (s-1 7min % recovery )(n = 4)
78.1 ± 2.4 4.4 Nifedipine 28.8 ± 2.9 0.5 Nicardapine 92.4 ± 5.3 3.5 Dizocilpine(MK-801) 92.9 ± 4.1 5.0 Mecamylamine 88.4 ± 2.7 2.2 Laudanosine 37.9 ± 7.3 0.7 Verapamil
48.9 ± 19.9 0.7 Methoxyverapamil 50.9 ± 6.6 1.0 Dextromethorphan
100.5 ± 3.8 2.0 3-Hydroxymorphinan 52.1 ± 2.4 1.7 Diltiazem 67.4 ± 3.4 1.9 Desacetyl Diltiazem 68.1 ± 3.3 1.8 N-demethyl Diltiazem
Seereference [22] fordetails.
ALLOSTERIC MODIFIERS * 745
initial activity (3-hydroxymorphinan) and 88% (laudanosine) or 78% (nifedipine) has any
pharmacological relevance.
The results of the study indicated that the chromatographically determined kd values should be
used to establish qualitative relationships, rather than as quantitativemeasures. This assumption was
tested using the Fisher Exact Test to determine the predictive value of kd. When the question was
‘‘does a kd � 1 s�1 predict a percent recovery � 50%?,’’ a significant correlationwas observedwith a
two-sided P-value of 0.0101; when the question was ‘‘does a kd < 2 s�1 predict a percent recovery
<75%?,’’ a very significant correlation was observed with a two-sided P-value of 0.0013.
As previously discussed above {Section 4.A.3}, the data from this study also demonstrate that
the chromatographicallymeasured kd values could be used to identify functional groups that play key
roles in determining the relative length of the inhibitory effect. For example, in the case of DM and 3-
hydroxymorphinian, the O-demethylated metabolite of DM (see Fig. 6), the conversion of a phenolic
ether to a phenol increased the kd from 1.0 to 2.0 s�1, which was reflected in a corresponding increase
in the percent recovery at 7 min from 50 to 100% (Table IX).
The data from this studywere also consistentwith the previous observation that an increase in the
negative electrostatic potential of a compound will decrease the length of the inhibitory effect, and
vice versa, see Section 4.A.3, and also demonstrated that the chromatographic approach can identify
changes inmolecular structure that do not have an effect on the kd values, and, therefore on the length
of the inhibitory activity. This was illustrated by diltiazem and verapamil. With diltiazem, O-
deacetylation orN-demethylation produced essentially the same kd values and percent recovery at the
7-min time point (Table IX). The addition of a methoxy group to one of the phenyl rings of verapamil
to form methoxyverapamil also resulted in no significant change in the observed kd value or percent
recovery at 7 min (Table IX). These results are also consistent with the description of the NCI-a3b4nAChR-binding mechanism,20 as the transformations do not significantly alter the electronic
characteristics of the compounds.
The effect of an increase in the net positive charge of amolecule on kd and percent recovery at the
7-min time point was illustrated by nifedipine and nicardipine, where the primary difference between
the twomolecules is the addition of an aminomoiety to the latter compound. This change produced an
�eightfold reduction in the observed kd value of nicardipine relative to nifedipine, 0.5 and 4.4 s�1,
respectively, and a�60% reduction in the percent recovery at the 7-min time point, 28.9 and 78.1%,
respectively (Table IX).
R2 = 0.7458
0
20
40
60
80
100
120
6.05.04.03.02.01.00.0
kd
% r
eco
very
at
7 m
in
Figure 10. Thecorrelationobservedbetweenthedissociationrate constants (kd) determined for the interactionofthe compoundsused in this study with immobilized a3b4 nAChRs usingnon-linearchromatographyand thepercent recoveryofnicotine-induced[86Rb
þ] efflux in KXa3b4 cells at 7minafterexposure to the compoundsused in the study.
746 * MOADDEL, JOZWIAK, AND WAINER
7 . C O N C L U S I O N S
In the discussion section of the manuscript reporting their early studies with an immobilized human
red cell glucose transporter, Lundahl and co-workers stated that ‘‘the immobilization procedure for
the red blood cells can probably be modified for immobilization of membranes from other
sources . . . ’’55 The authors further state that ‘‘the remarkable stability of the immobilized systems
may allow determination of equilibrium constants for various interactions and facilitates the study of
the effects of ionic strength, pH, temperature, lipid composition, and other parameters and conditions
on the affinities.’’55
The data presented in this review have demonstrated that Lundahl’s predictions were correct.
The immobilization of membrane fragments has been extended to include a variety of
transmembrane receptors obtained from different cell lines as well as tissues. The immobilized
receptors have been remarkably stable, for example, the nAChR columns are usually functional for
over 6 months, versatile, and applicable to routine determinations of binding affinities, binding sites,
and competitive binding interactions. Indeed, it has been demonstrated that the data obtained using
the quantitative affinity chromatographic approach is equivalent to data obtained using standard
binding techniques as well as functional techniques. An example of the latter case is the fact that there
was no significant difference in the identification of Pgp transporter substrates between chroma-
tographic method using an immobilized Pgp and transport studies using Caco-2 cell monolayers.76
What sets the chromatographic approach apart from other technologies, such as plate-based and
whole cell-basedmethods, is the ability to rapidly identify and characterize allosteric interactions. As
the interest allosteric modifiers increases, quantitative affinity chromatography could play an
important role in the development of therapeutic agents.
A C K N O W L E D G M E N T S
This work was supported by funds from the Intramural Research Program of the National Institute on
Aging of the National Institutes of Health.
R E F E R E N C E S
1. Gundish D. Nicotinic acetylcholine receptor ligands as potential therapeutics. Expert Opin Ther Patents2005;15:1221–1239.
2. Buccafusco JJ. Neuronal nicotinic receptor subtypes: Defining therapeutic targets. Mol Intervent 2004;4:285–293.
3. Newhouse P, SinghA, PotterA.Nicotine and nicotinic receptor involvement in neuropsychiatric disorders.Curr Top Med Chem 2004;4:267–282.
4. Herraiz T, Chaparro C. Human monoamine oxidase is inhibited by tobacco smoke: Beta-carbolinealkaloids act as potent and reversible inhibitors. Biochem Biophys Res Commun 2005;326:378–386.
5. Holladay MW, Dart MJ, Lynch JK. Neuronal nicotinic acetylcholine receptors as targets for drugdiscovery. J Med Chem 1997;40:4169–4194.
6. Simosky JK, Stevens KE, Freedman R. Nicotinic agonists and psychosis. Curr Drug Targets CNS NeurolDisord 2002;1:149–162.
7. Sabbagh MN, Lukas RJ, Sparks DL, Reid RT. The nicotinic acetylcholine receptor, smoking, andAlzheimer’s disease. J Alzheimers Dis 2002;4:317–325.
8. KemWR, Mahnir VM, Prokai L, Papke RL, Cao X, LeFrancois S, Wildeboer K, Prokai-Tatrai K, Porter-Papke J, Soti F. Hydroxy metabolites of the Alzheimer’s drug candidate 3-[(2,4-dimethoxy)benzylidene]-anabaseine dihydrochloride (GTS-21): Their molecular properties, interactions with brain nicotinicreceptors, and brain penetration. Mol Pharmacol 2004;65:56–67.
9. Tassonyi E, Charpantier E,Muller D, Dumont L, Bertrand D. The role of nicotinic acetylcholine receptorsin the mechanisms of anesthesia. Brain Res Bull 2002;57:133–150.
ALLOSTERIC MODIFIERS * 747
10. Dwoskin LP, Crooks PA. Competitive neuronal nicotinic receptor antagonists: A new direction for drugdiscovery. J Pharmacol Exp Ther 2001;298:395–402.
11. KenakinT.Allostericmodulators: The newgeneration of receptor antagonists.Mol Intervent 2004;4:222–229.
12. Friederich P, Dybek A, Urban BW. Stereospecific interaction of ketamine with nicotinic acetylcholinereceptors in human sympathetic ganglion-like SH-SY5Y cells. Anesthesiology 2000;93:818–824.
13. Fryer JD, Lukas RJ. Antidepressants noncompetitively inhibit nicotinic acetylcholine receptor function.J Neurochem 1999;72:1117–1124.
14. GeorgeTP, O’Malley SS. Current pharmacological treatments for nicotine dependence. Trends PharmacolSci 2004;25:42–48.
15. Glick SD,Maisonneuve IM, Kitchen BA, FleckMW.Antagonism of alpha 3 beta 4 nicotinic receptors as astrategy to reduce opioid and stimulant self-administration. Eur J Pharmacol 2002;438:99–105.
16. PapkeRL, Sanberg PR, Shytle RD.Analysis ofmecamylamine stereoisomers on human nicotinic receptorsubtypes. J Pharmacol Exp Ther 2001;297:646–656.
17. Hernandez SC, Bertolino M, Xiao Y, Pringle KE, Caruso FS, Kellar KJ. Dextromethorphan and itsmetabolite dextrorphan block alpha3beta4 neuronal nicotinic receptors. J Pharmacol Exp Ther 2000;293:962–967.
18. Xiao Y, Smith RD, Caruso FS, Kellar KJ. Blockade of rat alpha3beta4 nicotinic receptor function bymethadone, its metabolites, and structural analogs. J Pharmacol Exp Ther 2001;299:366–371.
19. Jozwiak K, Haginaka J, Moaddel R,Wainer IW. Displacement and nonlinear chromatographic techniquesin the investigation of interaction of noncompetitive inhibitors with an immobilized alpha3beta4nicotinic acetylcholine receptor liquid chromatographic stationary phase. Anal Chem 2002;74:4618–4624.
20. Jozwiak K, Ravichandran S, Collins JR, Wainer IW. Interaction of noncompetitive inhibitors with animmobilized alpha3beta4 nicotinic acetylcholine receptor investigated by affinity chromatography,quantitative-structure activity relationship analysis, and molecular docking. J Med Chem 2004;47:4008–4021.
21. Jozwiak K, Moaddel R, Yamaguchi R, Ravichandran S, Collins JR, Wainer IW. Qualitative assessment ofIC50 values of inhibitors of the neuronal nicotinic acetylcholine receptor using a single chromatographicexperiment and multivariate cluster analysis. J Chromatogr B Analyt Technol Biomed Life Sci 2005;819:169–174.
22. Moaddel R, Jozwiak K, Yamaguchi R, Wainer IW. Direct chromatographic determination of dissociationrate constants of ligand-receptor complexes: Assessment of the interaction of noncompetitive inhibitorswith an immobilized nicotinic acetylcholine receptor-based liquid chromatography stationary phase. AnalChem 2005;77:5421–5426.
23. Karlin A. Emerging structure of the nicotinic acetylcholine receptors. Nat Rev Neurosci 2002;3:102–114.24. Hucho F, Tsetlin VI, Machold J. The emerging three-dimensional structure of a receptor. The nicotinic
acetylcholine receptor. Eur J Biochem 1996;239:539–557.25. Albuquerque EX, AlkondonM, Pereira EF, Castro NG, Schrattenholz A, Barbosa CT, Bonfante-Cabarcas
R, Aracava Y, Eisenberg HM, Maelicke A. Properties of neuronal nicotinic acetylcholine receptors:Pharmacological characterization and modulation of synaptic function. J Pharmacol Exp Ther 1997;280:1117–1136.
26. Changeux JP, Galzi JL, Devillers-Thiery A, Bertrand D. The functional architecture of the acetylcholinenicotinic receptor explored by affinity labelling and site-directed mutagenesis. Q Rev Biophys1992;25:395–432.
27. Millar NS. Assembly and subunit diversity of nicotinic acetylcholine receptors. Biochem Soc Trans 2003;31:869–874.
28. Wang H, YuM, Ochani M, Amella CA, Tanovic M, Susarla S, Li JH, Yang H, Ulloa L, Al-Abed Y, CzuraCJ, Tracey KJ. Nicotinic acetylcholine receptor alpha7 subunit is an essential regulator of inflammation.Nature 2003;421:384–388.
29. Romanelli MN, Gualtieri F. Cholinergic nicotinic receptors: Competitive ligands, allosteric modulators,and their potential applications. Med Res Rev 2003;23:393–426.
30. Arias HR. Binding sites for exogenous and endogenous non-competitive inhibitors of the nicotinicacetylcholine receptor. Biochim Biophys Acta 1998;1376:173–220.
31. Auerbach A. Life at the top: The transition state of AChR gating. Sci STKE 2003;2003:re11.32. Krauss M, Korr D, Herrmann A, Hucho F. Binding properties of agonists and antagonists to distinct
allosteric states of the nicotinic acetylcholine receptor are incompatible with a concerted model. J BiolChem 2000;275:30196–30201.
748 * MOADDEL, JOZWIAK, AND WAINER
33. Arias HR. Topology of ligand binding sites on the nicotinic acetylcholine receptor. Brain Res Brain ResRev 1997;25:133–191.
34. Fryer JD, Lukas RJ. Noncompetitive functional inhibition at diverse, human nicotinic acetylcholinereceptor subtypes by bupropion, phencyclidine, and ibogaine. J Pharmacol Exp Ther 1999;288:88–92.
35. Arias HR, McCardy EA, Gallagher MJ, Blanton MP. Interaction of barbiturate analogs with the Torpedocalifornica nicotinic acetylcholine receptor ion channel. Mol Pharmacol 2001;60:497–506.
36. Ortells MO, Barrantes GE, Wood C, Lunt GG, Barrantes FJ. Molecular modelling of the nicotinicacetylcholine receptor transmembrane region in the open state. Protein Eng 1997;10:511–517.
37. Sankararamakrishnan R, Adcock C, SansomMS. The pore domain of the nicotinic acetylcholine receptor:Molecular modeling, pore dimensions, and electrostatics. Biophys J 1996;71:1659–1671.
38. Smith GR, SansomMS. Molecular dynamics study of water and Naþ ions in models of the pore region ofthe nicotinic acetylcholine receptor. Biochem Soc Trans 1997;25:548S.
39. Miyazawa A, Fujiyoshi Y, Unwin N. Structure and gating mechanism of the acetylcholine receptor pore.Nature 2003;423:949–955.
40. Oiki S, DanhoW,Madison V,Montal M.M2 delta, a candidate for the structure lining the ionic channel ofthe nicotinic cholinergic receptor. Proc Natl Acad Sci USA 1988;85:8703–8707.
41. Jozwiak K, Hernandez SC, Kellar KJ, Wainer IW. Enantioselective interactions of dextromethorphan andlevomethorphan with the alpha 3 beta 4-nicotinic acetylcholine receptor: Comparison of chromatographicand functional data. J Chromatogr B Analyt Technol Biomed Life Sci 2003;797:373–379.
42. Quick MW, Lester RA. Desensitization of neuronal nicotinic receptors. J Neurobiol 2002;53:457–478.
43. Moaddel R, JozwiakK,WhittingtonK,Wainer IW.Conformationalmobility of immobilized alpha3beta2,alpha3beta4, alpha4beta2, and alpha4beta4 nicotinic acetylcholine receptors. Anal Chem 2005;77:895–901.
44. Wainer I, Jozwiak K, Ravichandran S, Collins JR. Computer-based model for the identification andcharacterization of non-competitive inhibitors of nicotinic acetylcholine receptors and related ligand-gated ion channels, US patent Application No. 10/411,206. 2003.
45. Herz JM, Johnson DA, Taylor P. Interaction of noncompetitive inhibitors with the acetylcholine receptor.The site specificity and spectroscopic properties of ethidium binding. J Biol Chem 1987;262:7238–7247.
46. BixelMG,KraussM,LiuY,BolognesiML,RosiniM,Mellor IS,Usherwood PN,Melchiorre C,NakanishiK, Hucho F. Structure-activity relationship and site of binding of polyamine derivatives at the nicotinicacetylcholine receptor. Eur J Biochem 2000;267:110–120.
47. Pratt MB, Pedersen SE, Cohen JB. Identification of the sites of incorporation of [3H]ethidium diazidewithin the Torpedo nicotinic acetylcholine receptor ion channel. Biochemistry 2000;39:11452–11462.
48. ParkT,Bae S,Choi S,KangB,KimK. Inhibition of nicotinic acetylcholine receptors and calcium channelsby clozapine in bovine adrenal chromaffin cells. Biochem Pharmacol 2001;61:1011–1019.
49. Chiodini F, Charpantier E, Muller D, Tassonyi E, Fuchs-Buder T, Bertrand D. Blockade and activationof the human neuronal nicotinic acetylcholine receptors by atracurium and laudanosine. Anesthesiology2001;94:643–651.
50. Exley R, Iturriaga-Vasquez P, Lukas RJ, Sher E, Cassels BK, Bermudez I. Evaluation of benzy-ltetrahydroisoquinolines as ligands for neuronal nicotinic acetylcholine receptors. Br J Pharmacol 2005;146:15–24.
51. AriasHR. The high-affinity quinacrine binding site is located at a non-annular lipid domain of the nicotinicacetylcholine receptor. Biochim Biophys Acta 1997;1347:9–22.
52. Angal S, Dean PDG. Purification by exploitation of activity. In: Harris E, Angal S, editor. Proteinpurification methods, a practical approach. Oxford: Oxford University Press; 1989. pp 245–290.
53. Chaiken IM. Analytical affinity chromatography in studies of molecular recognition in biology: A review.J Chromatogr 1986;376:11–32.
54. Wade J, Bergold AF, Carr PW. Theoretical description of nonlinear chromatography, with applicationsto physicochemical measurements in affinity chromatography and implications for preparative-scaleseparations. Anal Chem 1987;59:1286–1295.
55. Brekkan E, Lundqvist A, Lundahl P. Immobilized membrane vesicle or proteoliposome affinitychromatography. Frontal analysis of interactions of cytochalasin B and D-glucose with the human red cellglucose transporter. Biochemistry 1996;35:12141–12145.
56. Gottschalk I, Lagerquist C, Zuo SS, Lundqvist A, Lundahl P. Immobilized-biomembrane affinitychromatography for binding studies of membrane proteins. J Chromatogr BAnalyt Technol Biomed LifeSci 2002;768:31–40.
ALLOSTERIC MODIFIERS * 749
57. Pidgeon C, Venkataram UV. Immobilized artificial membrane chromatography: Supports composed ofmembrane lipids. Anal Biochem 1989;176:36–47.
58. Beigi F, Wainer IW. Syntheses of immobilized G protein-coupled receptor chromatographic stationaryphases: Characterization of immobilized mu and kappa opioid receptors. Anal Chem 2003;75:4480–4485.
59. Beigi F, Chakir K, Xiao RP,Wainer IW.G-protein-coupled receptor chromatographic stationary phases. 2.Ligand-induced conformational mobility in an immobilized beta2-adrenergic receptor. Anal Chem2004;76:7187–7193.
60. Zhang Y, Xiao Y, Kellar KJ,Wainer IW. Immobilized nicotinic receptor stationary phase for on-line liquidchromatographic determination of drug-receptor affinities. Anal Biochem 1998;264:22–25.
61. Moaddel R, Bullock PL, Wainer IW. Development and characterization of an open tubular columncontaining immobilized P-glycoprotein for rapid on-line screening for P-glycoprotein substrates.J Chromatogr B Analyt Technol Biomed Life Sci 2004;799:255–263.
62. Zhang Y, Leonessa F, Clarke R, Wainer IW. Development of an immobilized P-glycoprotein stationaryphase for on-line liquid chromatographic determination of drug-binding affinities. J Chromatogr BBiomed Sci Appl 2000;739:33–37.
63. Moaddel R, Yamaguchi R, Ho PC, Patel S, Hsu CP, Subrahmanyam V, Wainer IW. Development andcharacterization of an immobilized human organic cation transporter based liquid chromatographicstationary phase. J Chromatogr B Analyt Technol Biomed Life Sci 2005;818:263–268.
64. Moaddel R, Cloix JF, Ertem G, Wainer IW. Multiple receptor liquid chromatographic stationary phases:The co-immobilization of nicotinic receptors, gamma-amino-butyric acid receptors, and N-methylD-aspartate receptors. Pharm Res 2002;19:104–107.
65. Sevin-Landais A, Rigler P, Tzartos S, Hucho F, Hovius R, Vogel H. Functional immobilisation of thenicotinic acetylcholine receptor in tethered lipid membranes. Biophys Chem 2000;85:141–152.
66. Besanger TR, EaswaramoorthyB, Brennan JD. Entrapment of highly activemembrane-bound receptors inmacroporous Sol-Gel derived silica. Anal Chem 2004;76:6470–6475.
67. Thomas H. Heterogeneous ion exchange in a flowing system. J Am Chem Soc 1944;66:66–69.68. Jaulmes A, Vidal-Madjar C. Theoretical aspects of quantitative affinity chromatography: An overview.
In: Giddings J, Grushka E, Brown PR, editor. Advances in Chromatography, Vol. 28. New York: MarcelDekker; 1989. pp 1–64.
69. Bertucci C, Bartolini M, Gotti R, Andrisano V. Drug affinity to immobilized target bio-polymers byhigh-performance liquid chromatography and capillary electrophoresis. J Chromatogr B Analyt TechnolBiomed Life Sci 2003;797:111–129.
70. Hage DS, Austin J. High-performance affinity chromatography and immobilized serum albumin as probesfor drug- and hormone-protein binding. J Chromatogr B Biomed Sci Appl 2000;739:39–54.
71. Cheng Y, Prusoff W. Relationship between the inhibition constant (KI) and the concentration of inhibitorwhich causes 50 percent inhibition (I50) of an enzymatic reaction. Biochem Pharmacol 1973;22:3099–3108.
72. Moaddel R, Jozwiak K, Yamaguchi R, Cobello C, Whittington K, Sarkar TK, Basak S, Wainer IW.On-line screening of conformationally constrained nicotines and anabasines for agonist activity at thealpha3beta4- and alpha4beta2-nicotinic acetylcholine receptors using immobilized receptor-basedliquid chromatographic stationary phases. J Chromatogr B Analyt Technol Biomed Life Sci 2004;813:235–240.
73. Kroger D, Liley M, Schiweck W, Skerra A, Vogel H. Immobilization of histidine-tagged proteins on goldsurfaces using chelator thioalkanes. Biosens Bioelectron 1999;14:155–161.
74. Krusek J, Dittert I, Hendrych T, Hnik P, Horak M, Petrovic M, Sedlacek M, Susankova K, Svobodova L,Tousova K, Ujec E, Vlachova V, Vyklicky L, Vyskocil F, Vyklicky L, Jr. Activation and modulation ofligand-gated ion channels. Physiol Res 2004;53(Suppl 1):S103–S113.
75. Grosman C, Auerbach A. The dissociation of acetylcholine from open nicotinic receptor channels. ProcNatl Acad Sci USA 2001;98:14102–14107.
76. Moaddel R,HamidR, Patel S, Bullock P,Wainer IW. Identification of P-glycoprotein substrates using opentubular chromatography on an immobilized P-glycoprotein column: Comparison of chromatographicresults with Caco-2 permeability. Anal Chim Acta 2006;578:25–30.
750 * MOADDEL, JOZWIAK, AND WAINER
APPENDIX Marketed Drugs and Their Metabolites Identified as Non-Competitive Inhibitors of
Neuronal Nicotinic Acetylcholine Receptors with IC50 Values <100 mM
SiteSubtype Compound IC50 (µµM) Refadiphenine α3β4, α4β2, α4β4 A 1.8, 3.7, 6.3 U adamantadine α7, α4β2, α3β4 CL 6.5 (α7) Bamlodipine α3β4 C 5.8 U atracurium α7, α4β2, α3β4 D 35.6, 42.0, 3.9 U benzyltetrahydroisoquinolines α7, α4β2, α3β4 E See reference U buprenorphine α3β4 F 12.6 Q bupropion α3β4
α3β4, α4β2, α4β4 1.4 CL 1.8, 12, 14
GH
(2S,3S)-hydroxybupropiona α3β4, α4β2, α4β4 H 10, 3.3, 30.0 CL (2R,3R)-hydroxybupropiona α3β4, α4β2, α4β4 H 6.5, 31.0, 41.0 CL butorphanol α3β4 F 19.4 CL cembranoids α3β4, α4β2 I,J 2.2 – 33.1 U clomipramine α4β2 K 1.3 clozapine α3β4 C 28.0 U cocaine α4β2, α3β2
α3β4 CL5.5, 30.5 26.0 (K)I
LM
corticosterone α3β4 N 94.0 S dexamethasone α3β4 N 45.0 S dextromethorphan α3β4 8.9 CL
10.1OP
Dextrophana α3β4 P 29.6 CL (+)-3-hydroxymorphinanb α3β4 P 59.7 CL (+)-3-methoxymorphinanb α3β4 P 10.3 CL diltiazem α7, α4β2
α3β41.0, 3.8 U 2.3
QC
N-demethyl-dilitiazemc α3β4 C 2.3 U deacetyl-dilitiazemc α3β4 C 4.2 U N-demethyl-deacetyl-dilitiazemc α3β4 C 30.4 U O-demethyl-deacetyl-dilitiazemc α3β4 C 77.6 U N,O-didemethyl-deacetyl-dilitiazemc α3β4 C 73.2 U dimethisoquin α3β4 A 63.1 U (+)-dizocilpine (MK-801) α3β4
α3β457.0 (K)CL I
26.6MO
estradiol α3β4 N 43.0 S etomidate α4β2 R 33.0 CL fluoxetine α7, α3β4 S 11.0, 2.5 U galapamil α4β4 C 6.4 U halothane α4β2 R 27.0 U ibogaine α3β4 G 1.1 CL isofurane α3β4 R 56.0 CL ketamine α4β2, α3β4
α3β472.0, 9.5 CL 1.4
TC
laudanosine α7, α4β2, α4β3 D 18.3, 9.4, 38.4 U levomethorphan α3β4 P 10.9 CL levorphanol α3β4 P 39.9 CL lidocaine α3β4 A 63.0 U mecamylamine α3β4 O 1.0 CL memantine α3β4 C 6.6 CL
(Continued )
ALLOSTERIC MODIFIERS * 751
APPENDIX (Continued )
methadone α3β4 U 1.9 CL 18-methoxycoronaridine α3β4 V 0.75 U naltrindole α3β4 F 27.5 Q nefazodone α7, α3β4 S 33.0, 8.3 U nicardipine α3β4 C 2.5 U nifedipine α3β4 C 24.7 U paroxetine α7, α4β2 S 23.0, 4.9 U phencyclidine α3β4
α3β45.9 CL 7.0
GO
proadifen α3β4, α4β2, α4β4 A 0.6, 2.0, 1.5 U progesterone α3β4 N 11.0 S procaine α3β4 A 87.0 U propofal α3β4 P 5.4 CL propoxyphene α3β4 U 2.7 CL sertaline α7, α3β4 S 21, 3.1 U sevoflurane α4β2 R 98.0 U tetracaine α3β4, α4β2, α4β4 A 8.3, 27.0, 30.0 U tetrandrine α7, α4β2 W 2.7, 1.1 M thiopental α3β4 R 56.7 CL venlafaxine α3β4 S 12.0 U verapamil α7
α3β440.7 U 3.0
QC
Norverapamild α3β4 C 2.6 U D-620d α3β4 C 48.9 U
SiteSubtype Compound IC50 (µM) Ref
Wheresite refers toabindingsiteonthereceptor towhichthecompoundhasbeenshowntobind, andthesite is labeledasthecentral
lumen (CL), ethidium(E), quinacrine (Q), steroid (S), andUindicatesthat thesitehasnotbeenidentified.aBupropionmetabolite.
bDextromethorphanmetabolite.
cDiltiazemmetabolite.dVerapamilmetabolite.
R E F E R E N C E S F O R A P P E N D I X :
A. Gentry CL, Lukas RJ. Local anesthetics non-competitively inhibit function of four distinctnicotinic acetylcholine receptor subtypes. J Pharmacol Exp Ther 2001;299:1038–1048.
B. Matsubayashi H, SwansonKL,Albuquerque EX.Amantadine inhibits nicotinic acetylcholinereceptor function in hippocampal neurons. J Pharmacol Exp Ther 1997;281:834–844
C. Jozwiak K, Moaddel R, Yamaguchi R, Ravichandran S, Collins JR, Wainer IW. Qualitativeassessment of IC 50 values of inhibitors of the neuronal nicotinic acetylcholine receptor usinga single chromatographic experiment and multivariate cluster analysis. J Chromatography2005;819:169–174.
D. Chiodini F, Charpantier E, Muller D, Tassonyi E, Fuchs-Buder T, Bertrand D. Blockade andactivation of the human neuronal nicotinic acetylcholine receptors by atracurium andlaudanosine. Anesthesiology 2001;94:643–651.
E. Exley R, Iturriaga-Vasquez P, Lukas RJ, Sher E, Cassels BK, Bermudez I. Evaluation ofbenzyltetrahydroisoquinolines as ligands for neuronal nicotinic acetylcholine receptors. Brit JPharmacol 2005;146:15–24.
F. Jozwiak K, Ravichandran s, Collins JR,Wainer IW. Interaction of non-competitive inhibitorswith an immobilized a3b4 nicotinic acetylcholine receptor investigated by affinitychromatography, quantitative-structure activity relationship analysis, andmolecular docking.J Med Chem 2004;47:4008–4021.
G. Fryer JD, Lukas RJ. Non-competitive functional inhibition at diverse, human nicotinicacetylcholine receptor subtypes by bupropion, phencyclidine, and ibogaine. J Pharmacol ExpTher 1999;288:88–92.
752 * MOADDEL, JOZWIAK, AND WAINER
Dr.RuinMoaddel received his Ph.D. from Northeastern University in 1999 and was a postdoctoral fellow in the
Department of Pharmacology at Georgetown University. He then joined the Bioanalytical and Drug Discovery
Section of the Gerontology Research Center, National Institute on Aging in 2001 as a Senior Scientist. His
research interests are in protein immobilizations and their application in Drug Discovery.
Dr. Krzysztof Jozwiak graduated from Medical University of Lublin, Poland in 2000 and was a postdoctoral
fellow in the Gerontology Research Center, NIA in Baltimore, MD under the supervision of Irving W. Wainer from
2000–2003. He is currently an Associate Professor at the Faculty of Pharmacy, Medical University of Lublin,
Poland. His main research interests include novel experimental approaches in characterization of ligand–
receptor interactions and molecular modeling applications in medicinal chemistry.
Professor IrvingW.Wainer received his Ph.D. degree in chemistry from Cornell University in 1970 from Prof.
Jerrold Meinwald, and did postdoctoral studies in molecular biology (University of Oregon) and clinical
pharmacology (Thomas Jefferson Medical School). Professor Wainer has published more than 300 scientific
papers and 9 books and 23 book chapters. He was founding editor of the journal Chirality (1988–1994) and
Senior Editor of the Journal of Chromatography B: Biomedical Sciences and Applications (1993–2003). In his
current position at the Laboratory for Clinical Investigation at the National Institute on Aging/National
Institutes of Health, Professor Wainer’s research program includes the development of new tools for the
identification and development of new drug substances based upon immobilized receptors, drug transporters and
enzymes placed in a flow system.
H. DamajMI, Carroll FI, Eaton JB,NavarroHA,BloughBE,Mirza S, Lukas RJ,Martin BR. Enantioselectiveeffects of hydroxy metabolites of bupropion on behavior and on function of monoamine transporters andnicotinic receptors. Mol Pharmacol 2004;66:675–682.
I. Fryer JD, Lukas RJ. Non-competitive functional inhibition at diverse, human nicotinic acetylcholinereceptor subtypes by bupropion phencyclidine, and ibogaine. J Pharmacol Exp Ther 1999;288:88–92.
J. EatonMJ, Ospina CA, Rodriguez AD, Eterovic VA. Differential inhibition of nicotine-and acetylcholine-evoked currents through a4b2 neuronal nicotinic receptors by tobacco cembranoids in Xenopus oocytes.Neurosci Lett 2004;366:97–102.
K. Lopez-Valdes HE, Garcia-Colunga J, Miledi R. Effects of clomipramine on neuronal nicotinicacetylcholine receptors. Eur J Pharmacol 2002;444:13–19.
L. DamajMI, Slemmer JE, Carroll FI,Martin BR. Pharmacological characterization of nicotine’s interactionwith cocaine and cocaine anaologs. J Pharmacol Exp Ther 1999;289:1229–1236.
M. Krivoshein AV, Hess GP.Mechanism-based approach to the successful prevention of cocaine inhibition ofthe neuronal (a3b4) nicotinic acetylcholine receptor. Biochem 2004;43:481–489.
N. Ke L, Lukas RJ. Effects of steroid exposure on ligand binding and functional activities of diverse nicotinicacetylcholine receptor subtypes. J Neurochem 1996;67:1100–1112.
O. Hernandez SC, Bertolino M, Xiao Y, Pringle KE, Caruso FS, Kellar KJ. Dextromethorphan and itsmetabolite dextrorphan block a3b4 neuronal nicotinic receptors. J Pharmacol Exp Ther 2000;293:962–967.
P. Jozwiak K, Hernandez SC, Kellar KJ, Wainer IW. Enantioselective interactions of dextromethorphan andlevomethorphan with the a3b4-nicotinic acetylcholine receptor: Comparison of chromatographic andfunctional data. J Chromatography B 2003;797:373–379.
Q. Houlihan LM, Slater EY, Beadle DJ, Lukas RJ, Bermudez I. Effects of diltiazem on human nicotinicacetylcholine and GABA receptors. Neuro Pharmacol 2000;39:2533–2542.
R. Tassonyi E, Charpantier E,Muller D, Dumont L, Bertrand D. The role of nicotinic acetylcholine receptorsin the mechanisms of anesthesia. Brain Res 2002;57:133–150.
S. Fryer JD, Lukas RJ. Antidepressants non-competitively inhibit nicotinic acetylcholine receptor function. JNeurochem 1999;72:1117–1124.
T. Yamakura T, Chavez-Noriega LE, Harris RA. Subunit-dependent inhibition of human neuronal nicotinicacetylcholine receptors and other ligand-gated ion channels by dissociative anesthetics ketamine anddizocilpine 2000;92:1144–1153.
U. Xiao Y, Smith RD, Caruso FS, Kellar KJ. Blockade of rat a3b4 nicotinic receptor function by methadone,its metabolites, and structural analogs. J Pharmacol Exp Ther 2001;299:366–371.
V. Glick SD, Maisonneuve IM, Kitchen BA. Modulation of nicotine self-administration in rats bycombination therapywith agents blocking a3b4 nicotinic receptors. Eur J Pharmacol. 2002;448:185–191.
W. Slater Y, Houlihan LM, Cassels BK, Lukas RJ, Bermudez I. Effects of the plant alkaloid tetrandrine onhuman nicotinic acetylcholine receptors. Eur J Pharmacol 2002;450:213–221.
ALLOSTERIC MODIFIERS * 753