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FEBS Letters 580 (2006) 4246–4251
Characterization of AtNST-KT1, a novel UDP-galactosetransporter from Arabidopsis thaliana
Inga Rollwitz, Marcella Santaella, Diana Hille, Ulf-Ingo Flugge, Karsten Fischer*
Botanisches Institut, Universitat zu Koln, Gyrhofstr. 15, 50931 Koln, Germany
Received 22 May 2006; revised 21 June 2006; accepted 23 June 2006
Available online 5 July 2006
Edited by Michael R. Sussman
Abstract Nucleotide sugar transporters (NST) mediate thetransfer of nucleotide sugars from the cytosol into the lumen ofthe endoplasmatic reticulum and the Golgi apparatus. Becausethe NSTs show similarities with the plastidic phosphate translo-cators (pPTs), these proteins were grouped into the TPT/NSTsuperfamily. In this study, a member of the NST-KT family,AtNST-KT1, was functionally characterized by expression ofthe corresponding cDNA in yeast cells and subsequent transportexperiments. The histidine-tagged protein was purified by affinitychromatography and reconstituted into proteoliposomes. Thesubstrate specificity of AtNST-KT1 was determined by measur-ing the import of radiolabelled nucleotide mono phosphates intoliposomes preloaded with various unlabelled nucleotide sugars.This approach has the advantage that only one substrate hasto be used in a radioactively labelled form while all the nucleotidesugars can be provided unlabelled. It turned out that AtNST-KT1 represents a monospecific NST transporting UMP in count-erexchange with UDP-Gal but did not transport other nucleotidesugars. The AtNST-KT1 gene is ubiquitously expressed in all tis-sues. AtNST-KT1 is localized to Golgi membranes. Thus,AtNST-KT1 is most probably involved in the synthesis of galac-tose-containing glyco-conjugates in plants.� 2006 Federation of European Biochemical Societies. Publishedby Elsevier B.V. All rights reserved.
Keywords: Nucleotide sugar transporters; UDP-galactose;Golgi; Phosphate translocator
1. Introduction
One of the main functions of the endoplasmatic reticulum
(ER) and the Golgi apparatus in plant cells is the transfer of
sugars to glycoproteins, glycolipids and to polysaccharides of
the cell wall like xyloglucans, arabinoxylans, and glucomann-
ans [1]. These non-cellulosic polysaccharides and numerous
cell wall associated glycoproteins contain a number of different
sugars such as galactose, glucose, mannose and others. Synthe-
Abbreviations: AtUTr1, Arabidopsis thaliana UDP-galactose trans-porter 1; ER, endoplasmatic reticulum; GDP-Fuc, GDP-fucose; GDP-Man, GDP-mannose; GONST, golgi nucleotide sugar transporter;GUS, b-glucuronidase; NST, nucleotide sugar transporter; pPT,plastidic phosphate translocators; UDP-Gal, UDP-galactose; UDP-GalNAc, UDP-N-acetyl-galactosamine; UDP-Glc, UDP-glucose;UDP-GlcA, UDP-glucuronic acid; UDP-GlcNAc, UDP-N-acetyl-glu-cosamine
*Corresponding author. Fax: +49 221 4705039.E-mail address: [email protected] (K. Fischer).
0014-5793/$32.00 � 2006 Federation of European Biochemical Societies. Pu
doi:10.1016/j.febslet.2006.06.082
ses of polysaccharides and proteoglucans are performed by
synthases and glycosyltransferases of the ER and Golgi lumen
that use nucleotide sugars as substrates, i.e. sugars that are
activated by the addition of UDP or GDP [2]. Most nucleotide
sugars are synthesized in the cytosol from UDP-Glc, GDP-
Man or myo-inositol [3,4]. Therefore, the nucleotide sugars
must be transported from the cytosol into the lumen of the
ER and Golgi apparatus. While most, but not all of the sugars
are transported across the ER membranes attached to doli-
chol, the transport into the Golgi lumen is mediated by nucle-
otide sugar transporters (NSTs) [5].
In the last decade, several NSTs from different organisms
were characterized at the molecular level [6], e.g. the yeast
UDP-GlcNAc transporter [7], the human UDP-Gal trans-
porter [8] and the Arabidopsis GDP-Man transporter [9].
Interestingly, the NSTs show sequence similarities to phos-
phate translocators of the inner envelope membrane of plastids
(pPTs) that transport inorganic phosphate in exchange with
phosphorylated compounds [10,11]. Therefore the pPTs and
NSTs belong to the same superfamily named TPT/NST that
in turn is part of the drug/metabolite superfamily [12]. In the
GDP-Man transporters from yeast and Arabidopsis that con-
stitute the golgi nucleotide sugar transporter (GONST) family,
a conserved GALNK motif has been identified that is required
for binding of the nucleotide sugar [9,13]. This consensus motif
is located in a region that is highly conserved between the pPTs
and NSTs. Remarkably, the lysine residue at the end of this
motif is conserved in all proteins of the TPT/NST superfamily
[11]. In the case of the GDP-Fuc transporter from human, a
mutation in that region leads to a defect in GDP-Fuc transport
into the lumen of the Golgi [14] suggesting that this region is
part of the substrate binding site.
Besides sequence similarities, further evidence corroborates
the close relationship between pPTs and NSTs. Both the size
of the NST and pPT proteins and the number of membrane
spanning regions are similar. The pPTs and NSTs consist of
320–340 amino acids and possess 8–10 transmembrane do-
mains [5,11,15]. Both groups of transporters function as
antiporters. NSTs exchange nucleotide sugars with the corre-
sponding nucleotide monophosphates [16] that originate, fol-
lowing transfer of the sugars by glycosyltransferases, from a
Golgi nucleotide diphosphatase.
The Arabidopsis genome contains about 50 genes encoding
members of the TPT/NST superfamily. Several of the NST-like
plant proteins can be divided into different families, that were
named the NST-KT-, NST-KVAG- and the NST-KD families
according to specific dipeptides at the putative substrate bind-
ing site [11]. These three families comprise more than 20
blished by Elsevier B.V. All rights reserved.
I. Rollwitz et al. / FEBS Letters 580 (2006) 4246–4251 4247
proteins of mostly unknown function. Only recently, the first
three proteins of these groups have been functionally charac-
terized. One protein of the NST-KT family and one of the
NST-KVAG family were shown to be UDP-Gal transporters
[17] while a second protein of the NST-KVAG family might
transport GDP-Man but also other nucleotide sugars [18].
These results and further extensive analysis of NST proteins
revealed that the degree of sequence identity is not indicative
for the substrate specificity of the transporters [6], i.e. the pre-
diction of the activities of these transporters by sequence anal-
ysis seems to be infeasible for most NSTs. Therefore, we
determined the function of a transporter of the NST-KT fam-
ily by measuring its transport activity after reconstitution into
proteoliposomes. Here we show that this protein functions as a
UDP-Gal transporter localized to Golgi membranes.
2. Materials and methods
2.1. MaterialsRadioactive nucleotide mono phosphates (a-33P-UMP) were pur-
chased from Hartmann Analyticals (Braunschweig, Germany). Nucle-otide sugars were obtained from Sigma (St. Louis, MO). The Gatewaydestination vectors used in this work (pGWB3, and pGWB5) werekindly provided by Tsuyoshi Nakagawa (Shimane University, Japan).The mouse sialyltransferase-GFP fusion in pGWB5 was kindly pro-vided by Martin Hulskamp (University of Cologne, Germany).
2.2. Cloning proceduresRNA was isolated from whole plants. First strand cDNA was syn-
thesized using SuperScript� II reverse transcriptase (Invitrogen LifeTechnologies). For expression in yeast, the coding regions of thecDNA encoding AtNST-KT1 and AtUDP-GalT2 (lacking the stop-co-dons) were amplified using the primers AtNST-KT1for (5 0-C ACCAAA ATG TTT AAA AAA ATG AGT GCT ACT-3 0), AtNST-KT1rev (5 0-CAC CTT TTC ATC AGA TTC GTT T-3 0), AtUG-alT2for (5 0-C AAC AAA ATG GAG AAA CCG GAG AGC GAGA-3 0) and AtUGalT2rev (5 0-TGG TTT AGT GTC ACC GAGTTC-3 0). The cDNA fragments were cloned into pENTR�/D-TOPO(Invitrogen Life Technologies) resulting in vector pENTR-AtNST-KT1 and pENTR-AtUGalT2. The DNA fragment of pENTR-AtNST-KT1 was subsequently cloned into the yeast expression vectorpYES-Dest52 (Invitrogen Life Technologies) using the LR-clonasereaction resulting in clone pYES-AtNST-KT1. This clone containeda His-6 tag fused to the C-terminus of the protein.
The AtNST-KT1-GFP and AtUGalT2-GFP constructs were gener-ated as translational fusions by cloning the DNA fragments from vec-tors pENTR-AtNST-KT1 and pENTR-AtUGalT2 into vector pGWB5resulting in clones pGWB5-AtNST-KT1 and pGWB5-AtUGalT2.
For the generation of the AtNST-KT1 promoter-GUS construct, thepromoter of the AtNST-KT1 gene including the first exon of the cod-ing region was amplified using the primers AtNST-KT1promfor(5 0-CAC CTC TTT AAC CAA ACG GAA CCT-3 0) and AtNST-KT1promrev (5 0-GAT GAT TCC AAC GGA AGT AA-3 0). Theresulting DNA fragment was cloned into pENTR�/D-TOPO (Invitro-gen Life Technologies) resulting in pENTR-AtNST-KT1prom, se-quenced and then cloned into the vector pGWB3 resulting in clonepGWB3-AtNST-KT1prom that contained a translational fusion ofAtNST-KT1 with the uidA gene from E. coli.
2.3. Plant transformation and gene expression analysisTransgenic plants were generated by vacuum infiltration of Arabid-
opsis thaliana plants using Agrobacterium cultures containing pGWB3-AtNST-KT1. Transformants were selected with kanamycin andverified by PCR analysis. Histochemical localization of GUS activitywas performed as described previously [19].
For analysis of subcellular protein localization, tobacco BY2 cellswere transformed with vectors pGWB5-AtNST-KT1, pGWB5-AtUG-alT2 and pGWB5-sialyltransferase essentially as described by Negrutiuet al. [20]. Protoplasts were incubated at 22 �C in the dark. Aliquots for
analysis of GFP fluorescence were taken 18–24 h after transformationof the protoplasts. Fluorescence microscopy was performed using a Ni-kon eclipse E800 microscope coupled to a Digital camera (ky- F1030,JVC, Japan). Detection of GFP was achieved using a GFP filter (exci-tation 460–500 nm and emission 510–560 nm).
2.4. Yeast transformation, reconstitution of transport activities, and
in vitro transport assayThe uracil-auxotrophic yeast strain InvSc1 was transformed with
pYES-AtNST-KT1 and cells containing the plasmid were selected onplates lacking uracil. For membrane preparation, cells were grown insynthetic complete dropout liquid media lacking uracil and the expres-sion of AtNST-KT1 was induced by the addition of galactose (2% (w/v)). Cells were harvested 6 h after induction, disrupted in a buffer con-taining 10 mM Tris–HCl, pH 7.5, 1 mM EDTA, 300 lg mL�1 phenyl-methylsulfonyl-fluoride and the 100000 · g membrane fractioncontaining the expressed AtNST-KT1-His6 protein was prepared byultracentrifugation.
Reconstitution of the transport activity was performed essentially asdescribed [21], with slight modifications. Liposomes were preparedfrom acetone-washed phosphatidylcholine (120–130 mg mL�1) by son-ication for 4 min on ice in 100 mM potassium phosphate, pH 7.8,50 mM potassium gluconate, and 0.2 mM of substrate as indicated.Yeast membranes were solubilized using 1.5–3% (w/v) Triton X-100as detergent and directly reconstituted or subjected to purificationvia metal-affinity chromatography on Ni2+-nitrilotriacetic acid agarose(Qiagen, Hilden, Germany) before being added to the liposomes. Affin-ity purification was performed essentially as described [22]. Incorpora-tion of the purified protein into the liposomes was achieved by afreeze–thaw step. After sonication, the external medium was removedby passing the liposomes over Sephadex G-25 columns. Eluted prote-oliposomes were used for transport, which was initiated by addition of[33P] UMP (20 lM) as the external counter-exchange substrate and ter-minated at different time points (15–120 s) by passing the liposomesover a Dowex AG1-X8 anion exchange column. The radioactivity ofthe eluate was determined by liquid scintillation counting.
3. Results and discussion
3.1. Molecular characterization of AtNST-KT1
Plants possess a remarkable high number of NST proteins as
revealed by database searches (http://aramemnon.botanik.uni-
koeln.de/) that can be grouped into five different families
[11,17]. In Arabidopsis, 43 distinct genes encoding NSTs and
seven genes (including one pseudogene) encoding pPTs could
be identified while 43 NST genes and ten pPT genes were de-
tected in rice. Only nine of the 43 NST proteins in Arabidopsis
have been analyzed in detail so far, namely members of the
GONST family, GONST1 to GONST4, that transport GDP-
Man [9,18] and two members of a family that was named
UTR according to the AtUTr proteins which have been de-
scribed by Norambuena and colleagues [23,24]. AtUTr1 was
the first NST from plants shown to transport UDP-activated
sugars, namely UDP-Gal and UDP-Glc [23] while a second
transporter, AtUTr2, was shown to solely transport UDP-
Gal [24]. Three NST families have been named NST-KD,
NST-KT and NST-KVAG according to a specific dipeptide
that is part of the putative substrate binding site [11]. Two pro-
teins belonging to the NST-KVAG family have been shown to
transport UDP-Gal (AtUDP-GalT1) [17] and GDP-Man
(GONST5) [18]. In contrast, the monospecific UDP-Gal trans-
porter AtUDP-GalT2 [17] is a member of the NST-KT family.
To characterize the substrate specificities and the physiolog-
ical function of NSTs, three different experimental strategies
have been employed. First, mutants of yeast or other
organisms that are defective in a particular nucleotide sugar
transport activity were functionally complemented by
4248 I. Rollwitz et al. / FEBS Letters 580 (2006) 4246–4251
(heterologous) NSTs thereby allowing the characterization of
the corresponding substrate specificities [9,17,18,23,25]. Sec-
ond, most of the NSTs have been characterized by measuring
the transport of radiolabelled nucleotide sugars into micro-
somes or Golgi enriched vesicles isolated from rat liver or yeast
that overexpress particular NST proteins [9,10,17,23,24]. How-
ever, characterization of NSTs in transport assays using Golgi
vesicles could be complicated by a high background of endog-
enous transport activities and by competing glycosyltransfe-
rases that also use nucleotide sugars as substrates [26]. Third,
Fig. 1. Expression of AtNST-KT1 in yeast cells and purification of theHis-tagged protein. (A) Western blot analysis of yeast membraneproteins. Membrane proteins were isolated from cells of clone pYES-AtNST-KT1 and pYES-Dest52. Proteins were separated by SDS–PAGEand transferred onto nylon membranes. His-tagged AtNST-KT1 proteinwas detected by an anti-His antibody. M, Molecular weight marker; 1,pYES-AtNST-KT1; 2, pYES-Dest52. (B) Purification of the AtNST-KT1 protein by Ni2+-NTA chromatography. Yeast membrane pro-teins were solubilized by detergent and the AtNST-KT1 protein waspurified by affinity chromatography (see Section 2). Total yeastmembrane proteins and aliquots of different fractions were analyzed bySDS/PAGE and silver staining and by Western blotting using an anti-his antibody. M, Molecular weight marker; lanes 1 and 5, totalmembrane proteins; lanes 2 and 6, flow-through of the Ni2+-NTAcolumn; lanes 3 and 7, proteins eluted by washing buffer; lanes 4 and 8,proteins eluted with 150 mM imidazole.
transporters were solubilized by detergents and reconstituted
into artificial liposomes. Hirschberg and colleagues were the
first who used this approach to characterize NSTs from rat li-
ver Golgi membranes and to purify the UDP-GalNAc and
GDP-Fuc transporters to almost homogeneity by different
chromatographic techniques [27–29]. Here, we used the recon-
stitution assay for the molecular characterization of AtNST-
KT1, a transporter that belongs to the NST-KT family and
that is encoded by the gene At4g39390. The corresponding
cDNA was extended by a DNA-fragment encoding a C-termi-
nal His6-tag by cloning into the yeast expression vector pYES-
Dest52. Yeast cells were transformed with this construct as
well as with the empty vector as a control. Heterologous
expression of AtNST-KT1 was verified by Western blot analy-
sis using the anti-His antibody detecting a protein of 34 kD in
isolated membranes of pYES-AtNST-KT1 clones exclusively
(Fig. 1A).
Proteins of total yeast membranes were solubilized by deter-
gent and reconstituted into liposomes which had been pre-
loaded with different substrates. We used a new approach for
the measurement of the transport activities that is based on
particular properties of the NSTs. These transporters are
shown to act through an antiport mechanism involving an
one-for-one exchange between the external nucleotide sugar
and the corresponding lumenal nucleotide monophosphate
[5]. Therefore, the substrate specificities of NSTs could be ana-
lyzed by measuring the transport of radiolabelled nucleotide
monophosphates into liposomes instead of radiolabelled nucle-
otide sugars as it has been the case in previous studies. This ap-
proach has the advantage that only one substrate needs to be
used in a radioactively labelled form while all the nucleotide
sugars (which are either not commercially available or rather
expensive as radiolabelled compounds) can be provided unla-
Fig. 2. Determination of substrate specificities of AtNST-KT1. Totalmembrane proteins from yeast cells transformed with pYES-AtNST-KT1 or pYES-Dest52 (vector control) or the purified AtNST-KT1-His6 protein (P-) were reconstituted into liposomes which had beenpreloaded with substrates as indicated. Transport activities weremeasured as described in Section 2. The results shown are means of 3independent measurements except for liposomes containing the puri-fied protein but without preloading.
I. Rollwitz et al. / FEBS Letters 580 (2006) 4246–4251 4249
belled. Thus, the transport of all nucleotide sugars that are
potentially involved in the synthesis of glycoconjugates can
be easily tested.
As shown in Fig. 2, the recombinant expressed AtNST-KT1
protein transports UMP only when the liposomes were pre-
loaded with UDP-Gal but not with other nucleotide sugars like
UDP-Glc or UDP-GlcNAc. Most importantly, no transport
into empty liposomes without any counter-exchange substrate
or into liposomes containing proteins from the vector control
could be detected indicating that AtNST-KT1 transports only
Fig. 3. Intracellular localization of AtNST-KT1 and AtUDP-GalT2. TobaccKT1, pGWB5-AtUGalT2, pGWB5-sialyltransferase and, as control, with pGthe dark and aliquots for analysis of GFP fluorescence were taken 18–24 h apGWB5-AtNST-KT1; row B, cells transformed with pGWB5-AtUGalT2; rtransformed with pGWB5; row E, non-transformed cells. Column 1, Fluorescof cells treated with brefeldin A; column 4, fluorescent images of cells treate
UDP-Gal and UMP in a strict counter-exchange mode but
none of other UDP activated sugars tested. To support this
finding, the solubilized AtNST-KT1 protein was purified from
the membrane fraction by Ni2+-NTA chromatography
(Fig. 1B) and reconstituted into liposomes. The data shown
in Fig. 2 clearly confirm that the purified protein indeed trans-
ports UMP in a strict exchange with UDP-Gal. To our knowl-
edge, the reconstitution of an affinity purified recombinant
protein, a technique that has been successfully used for
the molecular characterization of the plastidic phosphate
o BY2 cells were transiently transformed with vectors pGWB5-AtNST-WB5 containing the GFP gene. Protoplasts were incubated at 22 �C infter transformation of the protoplasts. Row A, Cells transformed withow C, cells transformed with pGWB5-sialyltransferase; row D, cellsent images; column 2, bright field images; column 3, bright field imagesd with brefeldin A.
Fig. 4. Expression of AtNST-KT1 in Arabidopsis. Transgenic plants containing the AtNST-KT1-promoter-GUS construct were analyzed asdescribed in Section 2. (a) 7-day-old seedling, (b) leaf of 7-day-old seedling, (c) 12-day-old seedling, (d) leaf of 12-day-old seedling, (e) mature leaf,(f) hypocotyl and shoot apex of 7-day-old seedling, (g) root tip, (h) flower, (i,j) siliques.
4250 I. Rollwitz et al. / FEBS Letters 580 (2006) 4246–4251
translocators [22], has been applied to the characterization of
only one NST so far, a protein from Leishmania donovani that
transports GDP-Man and other GDP activated sugars (26).
To analyze the substrate affinities in more detail, the apparent
kinetic constants of AtNST-KT1 for the transport of UMP
and the apparent inhibition constants for UDP-Gal and
UDP-Glc were determined. The KM for UMP is
4.2 ± 1.7 lM, while the apparent Ki values for the competitive
inhibition of UMP transport are 5.1 ± 1.7 lM for UDP-Gal
and 12.2 ± 0.4 lM for UDP-Glc which is in the same range
shown for other NSTs [5]. The low Ki for UDP-Glc indicates
that it could bind to the protein without being transported.
3.2. Expression pattern of AtNST-KT1 gene and subcellular
localization of the corresponding protein
Most of the NSTs are located in Golgi membranes while
some are in addition or exclusively located in ER membranes
[5]. To analyze the intracellular localization of AtNST-KT1,
the coding region of the cDNA was translationally fused to
the GFP cDNA and the construct was introduced into tobacco
BY2 cells. In addition, the closely related AtUDP-GalT2 was
also fused to GFP (AtUGalT2-GFP). As marker for the Golgi
apparatus, a sialyltransferase-GFP fusion protein (ST-GFP)
was used while GFP (pGWB5) served as negative control.
The pattern of fluorescence was analyzed by confocal micros-
copy and compared to the pattern of ST-GFP and AtUGalT2-
GFP (Fig. 3). All three fusion proteins produced a dot-like
pattern typical for the Golgi apparatus while GFP localized
to the cytosol and the nucleus. Treatment with brefeldin A
caused a significant change in the fluorescence pattern of the
transformed cells. Because brefeldin A induces a fusion of Gol-
gi and ER membranes and the formation of hybrid ER-Golgi
stacks [30], it can be concluded that both AtNST-KT1 and
AtUDP-GalT2 are located within the Golgi membrane system.
To determine the tissue-specific expression of the AtNST-
KT1 gene, the AtNST-KT1 promoter region (1884 bp) and
102 bp of the coding region were used to generate a transla-
tional fusion with the E. coli uidA (GUS) reporter gene. This
construct was stably transferred to Arabidopsis plants and
three of the resulting lines were analyzed for GUS activity.
All lines showed similar GUS histochemical staining. High
GUS expression was observed in young leaves while in older
leaves GUS activity was restricted to the vasculature (Fig. 4).
Strongest staining was detected in young, growing parts of
roots and stems, especially in the elongation zone of the roots
and in lateral root primordia. In the floral tissue, GUS activity
is restricted to the style and to the filaments, while no activity
was observed in sepals, petals, anthers and the stigma. In sili-
ques, staining was detectable mainly in the abscission zone
while seeds do not show any GUS activity.
3.3. Concluding remarks
AtNST-KT1 represents the fifth NST from Arabidopsis that
transports UDP-Gal. However, it is reasonable to assume that
Arabidopsis possesses more than five UDP-Gal transporters.
These could be other members of the TPT/NST family but
there may be further nucleotide sugar transporters that belong
to families other than TPT/NST. The redundancy of nucleo-
tide sugar transporters in plants offers an explanation for the
absence of any mutant phenotype in Arabidopsis mutant lines
lacking AtNST-KT1, AtUDP-GalT2 or any other transporter
of the NST-KT family (data not shown). Even mutant lines
with more than one disrupted NST-KT gene do not show a
phenotype different from the wild-type. Indeed, in plants lack-
ing any particular NST no mutant phenotypes have been de-
scribed so far. In contrast, in animals and fungi, the loss of
only one NST can lead to a deficiency in the synthesis of gly-
coconjugates, to developmental abnormalities and congenital
disorders [14,31,32]. However, the fact that Arabidopsis and
rice contain much more NSTs than animals points to their par-
ticular importance for plants in general. In this study, a novel
Arabidopsis UDP-Gal transporter localized in the Golgi mem-
brane system has been functionally characterized by use of a
newly employed experimental approach. Using this approach,
the identification of other nucleotide sugar transport activities
in A. thaliana and other organisms appears feasible.
Acknowledgements: This work was supported by the Deutsche Fors-chungsgemeinschaft. We thank Kirsten Bell for technical support.
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