Thorisson science online london sep2010

transcript

G. A. Thorisson, University of Leicester www.gen2phen.org

Science Online London, Sep 3-4 2010

- ORCID and DataCite - incentivizing data sharing

Gudmundur ‘Mummi’ Thorisson <gt50@le.ac.uk>Brookes lab

Department of Genetics, University of Leicester

Wednesday, 8 September 2010

The data sharing problem

From http://www.nature.com/news/specials/datasharing/

The data sharing problem

From http://www.nature.com/news/specials/datasharing/

analysedsynthesisedinterpreted

Information

published

Knowledge

Publication

Lack of incentives for sharing

• Effort required to prepare, package and submit data

• Time better spent writing papers & grants

• All stick (funders, journals) - no carrots

• “[...] Many of the issues regarding data availability can be addressed if the principles of “publication” rather than “sharing” are applied. However, online data publication systems also need to develop mechanisms for data citation and indices of data access comparable to those for citation systems in print journals”

• Costello, M. Motivating Online Publication of Data. BioScience (2009) vol. 59 (5) pp. 418-427

Science Online London, Sep 3-4 2010 4

Publishing a journal article

Publishing a dataset

Publishing a journal article

Register and log in

G. Thorisson, Univ. Leicestergthorisson@gmail.com

Associate account with ORCID ID

Metadata: describe dataset

ORCID ID: A-883-2010

Title: Hologram of Icelandic 9th century viking bowlSummary: Found in archeological dig in central Reykjavik

Metadata: describe dataset

Title: Hologram of Icelandic 9th century viking bowlSummary: Found in archeological dig in central Reykjavik

Co-contributor 1: [enter ORCID ID]Co-contributor 2: [enter ORCID ID][...]

Upload data and complete submission

Outcome 1/3

• Dataset is published online:

Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010) Hologram of Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. Available online at http://www.psychoceramicsarchive.org/data/98fsdf855

• Unambiguous attribution via ORCID identifiers

Outcome 1/3

• Dataset is published online:

Thorisson, G. (A-883-2010), Bilder, G.W. (C-035-2009) and Fenner, M. (A-101-2010) Hologram of Icelandic 9th century viking bowl. Psychoceramics Archive. Sep 2 2010. Available online at http://www.psychoceramicsarchive.org/data/98fsdf855

• Unambiguous attribution via ORCID identifiers

BUT, wait, there’s more!

Outcome 2/3

DOI + metadata

Outcome 2/3

• doi:10.4259/psycho.5gtpq-thorisson => http://www.psychoceramicsarchive.org/data/98fsdf855

DOI + metadata

Outcome 3/3

DOI <-> ORCID ID

Outcome 3/3

DOI <-> ORCID ID

• A-883-2010 <created> 10.4259/psycho.5gtpq-thorisson

• C-035-2009 <created> 10.4259/psycho.5gtpq-thorisson

• A-101-2010 <created> 10.4259/psycho.5gtpq-thorisson

• Who contributed to dataset 10.4259/psycho.5gtpq-thorisson?

• All data publications by A-883-2010 ?

• Which papers have cited the works of A-883-2010 ?

• Total no. citations to datasets by A-883-2010 in the last 2 years?

• Total no. downloads of datasets by A-883-2010?

• [....]

• Who contributed to dataset 10.4259/psycho.5gtpq-thorisson?

• All data publications by A-883-2010 ?

• Which papers have cited the works of A-883-2010 ?

• Total no. citations to datasets by A-883-2010 in the last 2 years?

• Total no. downloads of datasets by A-883-2010?

• [....]

Should we worry or be happy?

GEN2PHEN Consortiumhttp://www.gen2phen.org/about-gen2phen/partners

Prof Anthony J. Brookes Bioinformatics Group

This work has received funding from the European Community's Seventh Framework Programme (FP7/2007-2013)under grant agreement number 200754 - the GEN2PHEN project.

Acknowledgements

Contact me! Gudmundur A. Thorisson

<gt50@le.ac.uk>http://friendfeed.com/mummi

http://www.linkedin.com/in/mummi

Thorisson science online london sep2010

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