Front MatterSource: Proceedings of the National Academy of Sciences of the United States of America,Vol. 94, No. 4 (Feb. 18, 1997), pp. i-xPublished by: National Academy of SciencesStable URL: http://www.jstor.org/stable/41280 .
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PROCEEDINGS OF THE
NATIONAL ACADEMY OF SCIENCES
OF THE UNITED STATES OF AMERICA
February 18, 1997 Volume 94 / Number 4
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Proceedings of the National ACademy of Sciences
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PROCEEDINGS OF THE
NATIONAL ACADEMY OF SCIENCES
OF THE UNITED STATES OF AMERICA
February 18, 1997 Volume 94, Number 4 pp. 1049-1604
Table of Contents
Physical Sciences BIOCHEMISTRY
RNA-dependent phosphorylation of a nuclear RNA 1064-1068
CHEMISTRY binding protein Peter A. Fung, Roxanne Labrecque,
High-precision position-specific isotope analysis 1049-1053 and Thoru Pederson
MAH MT ICSa W. Rorso Micae G. ThomasfBrenn
Thomgas N.pCori soeandsJ.tThom reaof an active enzyme by the linkage of two 1069-1073
Comments on the article 'Persistent confusion of total 1603 protein modules entropy and chemical system entropy in chemical A. B.Nxn .S arn,adS.Bnoi thermodynamics (Correction) Nuclear integration of JAK/STAT and Ras/AP-1 1074-1079
John Ross signaling by CBP and pG300 Andrew B. Horvai, Lan Xu, Edward Korzus, Gyan Brard, Daniel Kalafus, Tina-Marie Mullen, David
MATHEMATICS W. Rose, Michael G. Rosenfeld, and Christopher K. Glass
Using a parity-sensitive sieve to count prime values of 1054-1058 a polynomial Native-like structure of a protein-folding intermediate 1080-1085
John Friedlander and Henryk lwaniec bound to the chaperonin GroEL Matthew S. Goldberg, Jing Zhang, Stacey Sondek, C. Robert Matthews, Robert 0. Fox,
Biological Sciences ~~~~~~~~and Arthur L. Horwich
Kinesin-73 in the nervous system of 1086-1091
APPLIED BIOLOGICAL SCIENCES Drosophila embryos Hsi-Ping Li, Zheng-Mei Liu, and Marshall Nirenberg
A new approach for containment of microorganisms: 1059-1063 Dual control of streptavidin expression by antisense p21-activated kinase has substrate specificity similar to 1092-1095 RNA and the T7 transcription system Acanthamoeba myosin I heavy chain kinase and
Przemyslaw Szafranski, Charlene M. Mello, Takeshi activates Acanthamoeba myosin I Sano, Cassandra L. Smith, David L. Kaplan, Hanna Brzeska, Ulla G. Knaus, Zhen-Yuan Wang, and Charles R. Cantor Gary M. Bokoch, and Edward D. Korn
v
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Contents
Catalysis of protein folding by 1096-1100 symmetric chaperone complexes
Helmut Sparrer, Kerstin Rutkat, and Johannes Buchner
Characterization of two scleroderma autoimmune 1101-1106 antigens that copurify with human ribonuclease P
Paul S. Eder, Ramesh Kekuda, Viktor Stolc, and Sidney Altman
The effect of macromolecular crowding on 1107-1112 chaperonin-mediated protein folding
J6rg Martin and F.-Ulrich Hartl
A novel 3'-end repair mechanism in an RNA virus 1113-1118 Peter D. Nagy, Clifford D. Carpenter, and Anne E. Simon
Rapid determination of single base mismatch 1119-1123 mutations in DNA hybrids by direct electric field control
Ronald G. Sosnowski, Eugene Tu, William F. Butler, James P. O'Connell, and Michael J. Heller
Antifolate-resistant mutants of Plasmodium falciparum 1124-1129 dihydrofolate reductase
Worachart Sirawaraporn, Tanajit Sathitkul, Rachada Sirawaraporn, Yongyuth Yuthavong, and Daniel V. Santi
Purification and characterization of the 1130-1135 prothoracicotropic hormone of Drosophila melanogaster
Ae-Jung Kim, Guang-Ho Cha, Kyungjin Kim, Lawrence I. Gilbert, and Chung Choo Lee
Isoform-specific interactions of Na,K-ATPase subunits 1136-1141 are mediated via extracellular domains and carbohydrates
Gunther Schmalzing, Karina Ruhl, and Sergio M. Gloor
Identification of an animal w-3 fatty acid desaturase 1142-1147 by heterologous expression inArabidopsis
James P. Spychalla, Anthony J. Kinney, and John Browse
Sequence-specific RNA binding by an SR protein 1148-1153 requires RS domain phosphorylation: Creation of an SRp40-specific splicing enhancer
Roland Tacke, Yan Chen, and James L. Manley
Cryptic single-stranded-DNA binding activities of the 1154-1159 phage A P and Escherichia coli DnaC replication initiation proteins facilitate the transfer of E. coli DnaB helicase onto DNA
Brian A. Learn, Soo-Jong Um, Li Huang, and Roger McMacken
Novel pyridinium surfactants for efficient, nontoxic in 1160-1165 vitro gene delivery
Irene van der Woude, Anno Wagenaar, Arthur A. P. Meekel, Martin B. A. ter Beest, Marcel H. J. Ruiters, Jan B. F. N. Engberts, and Dick Hoekstra
In vivo control of respiration by cytochrome c oxidase 1166-1171 in wild-type and mitochondrial DNA mutation-carrying human cells
Gaetano Villani and Giuseppe Attardi
Death effector domain-containing herpesvirus and 1172-1176 poxvirus proteins inhibit both Fas- and TNFR1-induced apoptosis
John Bertin, Robert C. Armstrong, Sabine Ottilie, David A. Martin, Yu Wang, Sean Banks, Guang-Hua Wang, Tatiana G. Senkevich, Emad S. Alnemri, Bernard Moss, Michael J. Lenardo, Kevin J. Tomaselli, and Jeffrey I. Cohen
A single zinc finger motif in the silencing factor 1177-1182 REST represses the neural-specific type II sodium channel promoter
Jose Tapia-Ramirez, Bart J. L. Eggen, Maria J. Peral-Rubio, Juan J. Toledo-Aral, and Gail Mandel
Nucleosome packaging and nucleosome positioning 1183-1188 of genomic DNA
P. T. Lowary and J. Widom
Cloning and sequence analysis of a Bothrops jararaca 1189-1193 cDNA encoding a precursor of seven bradykinin-potentiating peptides and a C-type natriuretic peptide
Nobuhiro Murayama, Mirian A. F. Hayashi, Hiroaki Ohi, Luiza A. F. Ferreira, Vivian V. Hermann, Hiromi Saito, Yoshiaki Fujita, Shigesada Higuchi, Beatriz L. Fernandes, Tetsuo Yamane, and Antonio C. M. de Camargo
BIOPHYSICS
An endogenous calcium oscillator may control early 1194-1199 embryonic division
Craig A. Swanson, Adam P. Arkin, and John Ross
CELL BIOLOGY
Hepatitis C virus core protein shows a cytoplasmic 1200-1205 localization and associates to cellular lipid storage droplets
G. Barba, F. Harper, T. Harada, M. Kohara, S. Goulinet, Y. Matsuura, G. Eder, Zs. Schaff, M. J. Chapman, T. Miyamura, and C. Brechot
The adenovirus E4orf6 protein can promote 1206-1211 ElA/ElB-induced focus formation by interfering with p53 tumor suppressor function
Michael Nevels, Susanne Rubenwolf, Thilo Spruss, Hans Wolf, and Thomas Dobner
The proliferation potential protein-related (P2P-R) 1212-1217 gene with domains encoding heterogeneous nuclear ribonucleoprotein association and Rbl binding shows repressed expression during terminal differentiation
Michael M. Witte and Robert E. Scott
A system for mutation measurement in mammalian 1218-1223 cells: Application to y-irradiation
Theodore T. Puck, Robert Johnson, and Steen Rasumussen
Identification of a c-fos-induced gene that is related to 1603 platelet-derived growth factor/vascular endothelial growth factor family (Correction)
Maurizio Orlandini, Lucia Marconcini, Rebecca Ferruzzi, and Salvatore Oliviero
vi
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Contents
DEVELOPMENTAL BIOLOGY
Microtubule-mediated transport of organelles and 1224-1229 localization of /3-catenin to the future dorsal side of Xenopus eggs
Brian A. Rowning, Jonathan Wells, Mike Wu, John C. Gerhart, Randall T. Moon, and Carolyn A. Larabell
Single-chain fusions of two unrelated homeodomain 1230-1234 proteins trigger pathogenicity in UJstilago maydis
Tina Romeis, Jorg Kamper, and Regine Kahmann
Drosophila Myc is oncogenic in mammalian cells and 1235-1240 plays a role in the diminutive phenotype
Nicole Schreiber-Agus, David Stein, Ken Chen, Jason S. Goltz, Leslie Stevens, and Ronald A. DePinho
Systematic isolation of peptide signal molecules 1241-1246 regulating development in hydra: LWamide and PW families
Toshio Takahashi, Yojiro Muneoka, Jan Lohmann, Maria S. Lopez de Haro, Gaby Solleder, Thomas C. G. Bosch, Charles N. David, Hans R. Bode, Osamu Koizumi, Hiroshi Shimizu, Masayuki Hatta, Toshitaka Fujisawa, and Tsutomu Sugiyama
ECOLOGY
Scaling regions for food web properties 1247-1251 Louis-Felix Bersier and George Sugihara
Strong density- and diversity-related effects help to 1252-1257 maintain tree species diversity in a neotropical forest
Christopher Wills, Richard Condit, Robin B. Foster, and Stephen P. Hubbell
Solar UVB-induced DNA damage and 1258-1263 photoenzymatic DNA repair in antarctic zooplankton
Kirk D. Malloy, Molly A. Holman, David Mitchell, and H. William Detrich III
EVOLUTION
Evolutionary mechanisms and population dynamics of 1264-1269 the third variable envelope region of HIV within single hosts
Yumi Yamaguchi and Takashi Gojobori
Evidence that eukaryotic triosephosphate isomerase is 1270-1275 of alpha-proteobacterial origin
Patrick J. Keeling and W. Ford Doolittle
The complete mitochondrial genome of the wallaroo 1276-1281 (Macropus robustus) and the phylogenetic relationship among Monotremata, Marsupialia, and Eutheria
Axel Janke, Xiufeng Xu, and Ulfur Arnason
The strength of indirect selection on 1282-1286 female mating preferences
M. Kirkpatrick and N. H. Barton
Intron positions correlate with module boundaries in 1603 ancient proteins (Correction)
Sandro Jose de Souza, Manyuan Long, Lloyd Schoenbach, Scott William Roy, and Walter Gilbert
GENETICS
Adenovirus-mediated gene transfer and expression of 1287-1292 human f3-glucuronidase gene in the liver, spleen, and central nervous system in mucopolysaccharidosis type VII mice
Toya Ohashi, Kazuhiko Watabe, Keiko Uehara, William S. Sly, Carole Vogler, and Yoshikatsu Eto
Mutations in the mariner transposase: The D,D(35)E 1293-1297 consensus sequence is nonfunctional
Allan R. Lohe, Daniel De Aguiar, and Daniel L. Hartl
Triplet repeat polymorphism in the transmembrane 1298-1303 region of the MICA gene: A strong association of six GCT repetitions with Behcet disease
Nobuhisa Mizuki, Masao Ota, Minoru Kimura, Shigeaki Ohno, Hitoshi Ando, Yoshihiko Katsuyama, Masaaki Yamazaki, Koji Watanabe, Kaori Goto, Satoshi Nakamura, Seiamak Bahram, and Hidetoshi Inoko
High-resolution functional mapping of a cloned gene 1304-1309 by genetic footprinting
Ila R. Singh, Rachel Adams Crowley, and Patrick 0. Brown
Germ-line knockout heterokaryons of an essential 1310-1315 ae-tubulin gene enable high-frequency gene replacement and a test of gene transfer from somatic to germ-line nuclei in Tetrahymena thermophila
Bing Hai and Martin A. Gorovsky
Transcriptional regulation in Archaea: In vivo 1316-1320 demonstration of a repressor binding site in a methanogen
Rachel Cohen-Kupiec, Carrine Blank, and John A. Leigh
A genetic system to identify DNA polymerase 1321-1326 f3 mutator mutants
Stacy L. Washington, Margaret S. Yoon, Alexander M. Chagovetz, Shu-Xia Li, Caroline A. Clairmont, Bradley D. Preston, Kristin A. Eckert, and Joann B. Sweasy
Evidence for a role for DNA polymerase /3 in 1327-1331 mammalian meiosis
Annemieke W. Plug, Caroline A. Clairmont, Eva Sapi, Terry Ashley, and Joann B. Sweasy
An unusual histone H3 specific for early macronuclear 1332-1337 development in Euplotes crassus
Carolyn L. Jahn, Zhong Ling, Christopher M. Tebeau, and Lawrence A. Klobutcher
IMMUNOLOGY
Antigen therapy eliminates T cell inflammation by 1338-1343 apoptosis: Effective treatment of experimental autoimmune neuritis with recombinant myelin protein P2
Andreas Weishaupt, Ralf Gold, Stefanie Gaupp, Gerhard Giegerich, Hans-Peter Hartung, and Klaus V. Toyka
vii
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Contents
Allergen-induced bronchial hyperreactivity and 1344-1349 eosinophilic inflammation occur in the absence of IgE in a mouse model of asthma
Paul D. Mehlhop, Matthijs van de Rijn, Alison B. Goldberg, Joanne P. Brewer, Viswanath P. Kurup, Thomas R. Martin, and Hans C. Oettgen
Allergic airway sensitization induces T cell activation 1350-1355 but not airway hyperresponsiveness in B cell-deficient mice
E. Hamelmann, A. T. Vella, A. Oshiba, J. W. Kappler, P. Marrack, and E. W. Gelfand
Identification of the B cell superantigen-binding site 1356-1360 of HIV-1 gpl20
Saoussen Karray and Moncef Zouali
Highly purified CD25- resting T cells cannot be 1361-1365 infected de novo with HIV-1
Chin-Sheng Chou, Octavio Ramilo, and Ellen S. Vitetta
Graft-versus-host-disease-associated lymphoid 1366-1371 hypoplasia and B cell dysfunction is dependent upon donor T cell-mediated Fas-ligand function, but not perforin function
Matthew B. Baker, Richard L. Riley, Eckhard R. Podack, and Robert B. Levy
Shuttling of initiating kinase between discrete 1372-1377 aggregates of the high affinity receptor for IgE regulates the cellular response
Chikako Torigoe, Byron Goldstein, Carla Wofsy, and Henry Metzger
In vivo accumulation of the same anti-melanoma T 1378-1383 cell clone in two different metastatic sites
Makoto Hishii, David Andrews, Lenora A. Boyle, Johnson T. Wong, Franco Pandolfi, Peter J. van den Elsen, and James T. Kurnick
A complex major histocompatibility complex D locus 1384-1389 variant generated by an unusual recombination mechanism in mice
Theodore J. Yun, Roger W. Melvold, and Larry R. Pease
CD30 induction of human immunodeficiency virus 1390-1395 gene transcription is mediated by TRAF2
Erdyni N. Tsitsikov, Dowain A. Wright, and Raif S. Geha
Clade B-based HIV-1 vaccines elicit cross-clade 1396-1401 cytotoxic T lymphocyte reactivities in uninfected volunteers
Guido Ferrari, Will Humphrey, M. Juliana McElrath, Jean-Louis Excler, Anne-Marie Duliege, Mary Lou Clements, Lawrence C. Corey, Dani P. Bolognesi, and Kent J. Weinhold
MEDICAL SCIENCES
Intestinal tumorigenesis is suppressed in mice lacking 1402-1407 the metalloproteinase matrilysin
Carole L. Wilson, Kathleen J. Heppner, Patricia A. Labosky, Brigid L. M. Hogan, and Lynn M. Matrisian
Developmental analysis and subcellular localization of 1408-1413 the murine homologue of ELL
Michael J. Thirman, Emily B. Diskin, Steven S. Bin, Hon S. Ip, Jacqueline M. Miller, and M. Celeste Simon
Recombinational construction in Escherichia coli of 1414-1419 infectious adenoviral genomes
Joel Crouzet, Laurent Naudin, C6cile Orsini, Emmanuelle Vigne, Lucy Ferrero, Aude Le Roux, Patrick Benoit, Martine Latta, Christophe Torrent, Didier Branellec, Patrice Denefle, Jean-Fran?ois Mayaux, Michel Perricaudet, and Patrice Yeh
Recovery of pituitary function after treatment with a 1420-1425 targeted cytotoxic analog of luteinizing hormone-releasing hormone
Magdolna Kovacs, Andrew V. Schally, Attila Nagy, Miklos Koppan, and Kate Groot
Persistent expression of human clotting factor IX from 1426-1431 mouse liver after intravenous injection of adeno-associated virus vectors
Dwight D. Koeberl, Ian E. Alexander, Christine L. Halbert, David W. Russell, and A. Dusty Miller
Zinc porphyrins: Potent inhibitors of hematopoieses in 1432-1436 animal and human bone marrow
John D. Lutton, Nader G. Abraham, George S. Drummond, Richard D. Levere, and Attallah Kappas
Regulation of DNA damage-induced apoptosis by the 1437-1440 c-Abl tyrosine kinase
Zhi-Min Yuan, Yinyin Huang, Takatoshi Ishiko, Surender Kharbanda, Ralph Weichselbaum, and Donald Kufe
Initiation of liver growth by tumor necrosis factor: 1441-1446 Deficient liver regeneration in mice lacking type I tumor necrosis factor receptor
Yasuhiro Yamada, Irina Kirillova, Jacques J. Peschon, and Nelson Fausto
The Epstein-Barr virus LMP1 amino acid sequence 1447-1452 that engages tumor necrosis factor receptor associated factors is critical for primary B lymphocyte growth transformation
Kenneth M. Izumi, Kenneth M. Kaye, and Elliott D. Kieff
Differential suppression by protease inhibitors and 1603 cytokines of apoptosis induced by wild-type p53 and cytotoxic agents (Correction)
Joseph Lotem and Leo Sachs
MICROBIOLOGY
A bacterial basic region leucine zipper histidine kinase 1453-1458 regulating toluene degradation
Peter C. K. Lau, Ying Wang, Ashok Patel, Diane Labbe, Helene Bergeron, Roland Brousseau, Yasuo Konishi, and Merriann Rawlings
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Contents
NEUROBIOLOGY
BNaC1 and BNaC2 constitute a new family of human 1459-1464 neuronal sodium channels related to degenerins and epithelial sodium channels
Jaime Garcia-Afioveros, Bruce Derfler, Janine Neville-Golden, Bradley T. Hyman, and David P. Corey
A binding site for Pax proteins regulates expression of 1465-1470 the gene for the neural cell adhesion molecule in the embryonic spinal cord
Brent D. Holst, Yibin Wang, Frederick S. Jones, and Gerald M. Edelman
Suckling and sucrose ingestion suppress persistent 1471-1475 hyperalgesia and spinal Fos expression after forepaw inflammation in infant rats
K. Ren, E. M. Blass, Q.-q. Zhou, and R. Dubner
Behavioral effects of estrogen receptor gene 1476-1481 disruption in male mice
Sonoko Ogawa, Dennis B. Lubahn, Kenneth S. Korach, and Donald W. Pfaff
Morphological plasticity of dendritic spines in central 1482-1487 neurons is mediated by activation of cAMP response element binding protein
Diane D. Murphy and Menahem Segal
Ataxia and altered dendritic calcium signaling in mice 1488-1493 carrying a targeted null mutation of the calbindin D28k gene
Matti S. Airaksinen, Jens Eilers, Olga Garaschuk, Hans Thoenen, Arthur Konnerth, and Michael Meyer
A post-tetanic time window for the reinforcement of 1494-1499 long-term potentiation by appetitive and aversive stimuli
Thomas Seidenbecher, Klaus G. Reymann, and Detlef Balschun
Progressive decline in avoidance learning paralleled by 1500-1505 inflammatory neurodegeneration in transgenic mice expressing interleukin 6 in the brain
Charles J. Heyser, Eliezer Masliah, Ana Samimi, lain L. Campbell, and Lisa H. Gold
Modulation by neurotransmitters of catecholamine 1506-1511 secretion from sympathetic ganglion neurons detected by amperometry
Duk-Su Koh and Bertil Hille
Molecular determinants of inactivation and G protein 1512-1516 modulation in the intracellular loop connecting domains I and II of the calcium channel ag1A subunit
Stefan Herlitze, Gregory H. Hockerman, Todd Scheuer, and William A. Catterall
Relative numbers of cortical and brainstem inputs to 15 17-1520 the lateral geniculate nucleus
Alev Eri~ir, Susan C. Van Horn, and S. Murray Sherman
Brain-derived neurotrophic factor regulates expression 1521-1526 of androgen receptors in perineal motoneurons
Hussien A. Al-Shamma and Arthur P. Arnold
Identification of PN1, a predominant 1527-1532 voltage-dependent sodium channel expressed principally in peripheral neurons
Juan J. Toledo-Aral, Brenda L. Moss, Zhi-Jun He, Adam G. Koszowski, Teri Whisenand, Simon R. Levinson, John J. Wolf, Inmaculada Silos-Santiago, Simon Halegoua, and Gail Mandel
Pleiotropic effects of a disrupted K+ channel gene: 1533-1538 Reduced body weight, impaired motor skill and muscle contraction, but no seizures
Chi Shun Ho, Robert W. Grange, and Rolf H. Joho
Co-expression of the neuronal 6a7 and L247T 6a7 1539-1543 mutant subunits yields hybrid nicotinic receptors with properties of both wild-type 6a7 and a7 mutant homomeric receptors
E. Palma, F. Eusebi, and R. Miledi
Opiate receptor knockout mice define y receptor 1544-1549 roles in endogenous nociceptive responses and morphine-induced analgesia
Ichiro Sora, Nobuyuki Takahashi, Masahiko Funada, Hiroshi Ujike, Randal S. Revay, David M. Donovan, Lucinda L. Miner, and George R. Uhl
Amyloid precursor protein processing and Af342 1550-1555 deposition in a transgenic mouse model of Alzheimer disease
K. Johnson-Wood, M. Lee, R. Motter, K. Hu, G. Gordon, R. Barbour, K. Khan, M. Gordon, H. Tan, D. Games, I. Lieberburg, D. Schenk, P. Seubert, and L. McConlogue
Interconversion of red opsin isoforms by the 1556-1561 cyclophilin-related chaperone protein Ran-binding protein 2
Paulo A. Ferreira, Tomoko A. Nakayama, and Gabriel H. Travis
PHARMACOLOGY
Characterization of the permeability barrier of human 1562-1567 skin in vivo
Fabrice Pirot, Yogeshvar N. Kalia, Audra L. Stinchcomb, Garrett Keating, Annette Bunge, and Richard H. Guy
PHYSIOLOGY
Stabilization of ion selectivity filter by pore loop ion 1568-1572 pairs in an inwardly rectifying potassium channel
Jian Yang, Mei Yu, Yuh Nung Jan, and Lily Yeh Jan
Dependence of intracellular signaling and 1573-1578 neurosecretion on phospholipase D activation in immortalized gonadotropin-releasing hormone neurons
Lixin Zheng, Lazar Z. Krsmanovic, Leoncio A. Vergara, Kevin J. Catt, and Stanko S. Stojilkovic
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Contents
PLANT BIOLOGY
Mechanism of photosystem II photoinactivation and 1579-1584 DI protein degradation at low light: The role of back electron flow
Nir Keren, Alexander Berg, Paul J. M. van Kan, Haim Levanon, and Itzhak Ohad
Plastoquinol at the quinol oxidation site of reduced 1585-1590 cytochrome bf mediates signal transduction between light and protein phosphorylation: Thylakoid protein kinase deactivation by a single-turnover flash
Alexander V. Vener, Paul J. M. van Kan, Peter R. Rich, Itzhak Ohad, and Bertil Andersson
Why do mitochondria synthesize fatty acids? Evidence 1591-1596 for involvement in lipoic acid production
Hajime Wada, David Shintani, and John Ohlrogge
Redox chains in chloroplast envelope membranes: 1597-1602 Spectroscopic evidence for the presence of electron carriers, including iron-sulfur centers
Pascale Jager-Vottero, Albert-Jean Dorne, Jeanne Jordanov, Roland Douce, and Jacques Joyard
AUTHOR INDEX xi-xiii
INFORMATION FOR AUTHORS xiv-xv
SIZING WORKSHEET xvi
COPYRIGHT ASSIGNMENT FORM xvii
x
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