+ All Categories
Home > Science > Glassman new phyt2014_poster_draft5

Glassman new phyt2014_poster_draft5

Date post: 19-Jul-2015
Category:
Upload: sydneyglassman
View: 66 times
Download: 0 times
Share this document with a friend
1
A continental view of ectomycorrhizal fungal spore banks: A quiescent functional guild with a strong biogeographic pattern Sydney I. Glassman 1 , Kabir G. Peay 2 , Jennifer M. Talbot 2 , Dylan P. Smith 2 , John W. Taylor 1 , Rytas Vilgalys 3 , Thomas D. Bruns 1 1 University of California, Berkeley, CA, USA 2 Stanford University, Stanford, CA, USA 3 Duke University, Durham, NC, USA What is a Spore Bank? Seed bank: seeds of plants that persist in soil for long periods of 0me and colonize a4er a disturbance. Ectomycorrhizal spore bank: EMF spores and sclero0a persist in soil for long periods of 0me and germinate in presence of plant roots. How do you sample a spore bank? Sieve and air dry soil to negligible soil moisture so all ac0ve mycelium dies and only spores and sclero0a are le4. Plant a pine seedling as a bioassay for the responsive spore bank. Collect root 0ps under dissec0ng microscope and extract their DNA. We then sequenced the ITS region with 454 pyrosequencing. Acknowledgements The Bruns, Taylor, Peay, and Vilgalys labs, Angela DiRocco, Judy Chung, Lisa Rosenthal, Michael Ernandes, Leslie Forero, Greg Bonito, MaS Smith, and all of the wonderful labs who hosted us during our sampling trips. 1. What paSerns will emerge from a con0nental survey of EMF spore banks? Will EMF spore banks be dispersal limited and thus structured by their biogeography? Yes, EMF spore banks are geographically pa6erned. Figure 1 (A) Each circle represents the fungal community (beta diversity metric = binary sorensen dice) at a single plot and plots are colored by loca0on within a state. Ellipses represent SD of point scores based on loca0on of a plot within a bioregion. (B) Fungi within plots are more similar to each other than expected by chance (mantel r = 0.1; p <0.001), and distance decay occurs between 300m and 1 km. Samples over 1 km – 6000 km apart are more dissimilar than expected by chance. The future: We currently are harves=ng bioassays growing in soils from 49 more plots: 15 in Alberta, Ontario, Bri=sh Columbia in Canada and 34 in the USA (Connec=cut, Michigan, Montana, Oregon, Texas, Virginia, Wyoming). 3. Are there only a few fungal genera capable of forming resistant spore banks? Yes, a few genera dominate EMF spore banks. Some genera reflect previous knowledge (Rhizopogon, Wilcoxina, Cenococcum, Tomentella) but some (Laccaria, Suillus, Tuber) were not known to be major players in spore banks. AK MN NC MS FL CA PR YO PR = Point Reyes Na0onal Seashore; YO = Yosemite Na0onal Park ; CA = Stanislaus Na0onal Forest; AK = Alaska; MN = Minnesota; MS = Mississippi; NC = North Carolina; FL = Florida Sampled from 19 plots x 13 samples per plot (+ aerial control) x 2 tree hosts (common and na0ve) x 35 reps per tree = 1,806 seedlings Pb Pc Pg Pm Pmo Pp Pt 0 2 4 6 8 10 12 EMF richness ac a a bc ab b b Figure 2 In all cases, the common host Pm recovered ≥ EMF OTUs than the na0ve tree host. There is no significant main effect of tree host on alpha diversity, but there is a significant tree by host interac0on due to differences in EMF richness across the con0nent. For beta diversity, with the excep0on of Pb in Minnesota, Pm did not recover significantly different EMF communi0es than na0ve host plant. Pb = Pinus banksiana; Pc = Pinus contorta; Pg = Picea glauca; Pm= Pinus muricata; Pmo= Pinus mon=cola; Pp = Pinus ponderosa; Pt = Pinus taeda. 2. Does bioassay plant host affect diversity of EMF taxa? No. In general, Pinus muricata, is an effec=ve bioassay host and recovered similar EMF communi=es as na=ve hosts. Where did we sample? 0.5 0.0 0.5 0.6 0.4 0.2 0.0 0.2 0.4 0.6 PC1 PC2 Boreal Southeastern Western Adonis R 2 = 0.5 p = 0.001 AK CA FL MN MS NC A 0.02 0.00 0.02 0.04 0.06 0.001 0.01 0.1 1 50 1000 5000 B Distance (Km) Mantel correla0on 1 Rhizopogon arctostaphyli, R. rubescens gr., R. salebrosus CA Most Frequent EMF Spore Bank Taxa Across the N. America Wilcoxina mikolae, Rhizopogon fuscorubens, R. rubescens gr., YO Sphaerosporella sp, Wilcoxina sp, Piloderma sp AK Laccaria sp, Suillus brevipes, Rhizopogon rubescens gr. MN Rhizopogon occidentalis, R. salebrosus, R. fuscorubens PR Rhizopogon rubescens gr., Cenococcum sp, R. fuscorubens MS Rhizopogon rubescens gr., Tuber sp1, Tuber sp2 NC Rhizopogon fuscorubescens, Cenococcum sp, Thelephora sp FL Common host 4. Will EMF taxa in spore banks will be rare or absent from fresh soil EMF communi0es from the exact same sampling loca0on? Yes, there was minimal overlap between soil and spore bank EMF. AK CA FL MN MS NC Soil v Spore Bank EMF Venn Diagrams Soil Spore bank Figure 4 In all loca0ons, over half the EMF OTUs recovered from the spore bank are never recovered from the fresh soil. Furthermore, there is liSle community overlap between EMF sequenced from fresh soils versus those in spore banks, indica0ng that similar to plants, those EMF that will dominate post disturbance will unlikely be the same as the major players in older forests.
Transcript
Page 1: Glassman new phyt2014_poster_draft5

A continental view of ectomycorrhizal fungal spore banks: A quiescent functional guild with a

strong biogeographic pattern!Sydney I. Glassman1, Kabir G. Peay2, Jennifer M. Talbot2, Dylan P. Smith2, John W.

Taylor1, Rytas Vilgalys3, Thomas D. Bruns1 1University of California, Berkeley, CA, USA 2 Stanford University, Stanford, CA, USA 3Duke University, Durham, NC, USA

What  is  a  Spore  Bank?    

Seed  bank:  seeds  of  plants  that  persist  in  soil  for  long  periods  of  0me  and  colonize  a4er  a  disturbance.    Ectomycorrhizal  spore  bank:  EMF  spores  and  sclero0a  persist  in  soil  for  long  periods  of  0me  and  germinate  in  presence  of  plant  roots.    

How  do  you  sample  a  spore  bank?    

Sieve  and  air  dry  soil  to  negligible  soil  moisture  so  all  ac0ve  mycelium  dies  and  only  spores  and  sclero0a  are  le4.  Plant  a  pine  seedling  as  a  bioassay  for  the  responsive  spore  bank.    Collect  root  0ps  under  dissec0ng  microscope  and  extract  their  DNA.  We  then  sequenced  the  ITS  region  with  454  pyrosequencing.    

     

Acknowledgements  The  Bruns,  Taylor,  Peay,  and  Vilgalys  labs,  Angela  DiRocco,  Judy  Chung,  Lisa  Rosenthal,  Michael  Ernandes,  Leslie  Forero,  Greg  Bonito,  MaS  Smith,  and  all  of  the  wonderful  labs  who  hosted  us  during  our  sampling  trips.  

1.  What  paSerns  will  emerge  from  a  con0nental  survey  of  EMF  spore  banks?  Will  EMF  spore  banks  be  dispersal  limited  and  thus  structured  by  their  biogeography?  Yes,  EMF  spore  banks  are  geographically  pa6erned.    

Figure  1  (A)  Each  circle  represents  the  fungal  community  (beta  diversity  metric  =  binary  sorensen  dice)  at  a  single  plot  and  plots  are  colored  by  loca0on  within  a  state.  Ellipses  represent  SD  of  point  scores  based  on  loca0on  of  a  plot  within  a  bioregion.  (B)  Fungi  within  plots  are  more  similar  to  each  other  than  expected  by  chance  (mantel  r  =  0.1;  p  <0.001),  and  distance  decay  occurs  between  300m  and  1  km.  Samples  over  1  km  –  6000  km  apart  are  more  dissimilar  than  expected  by  chance.    

The  future:  We  currently  are  harves=ng  bioassays  growing  in  soils  from  49  more  plots:    15  in  Alberta,  Ontario,  Bri=sh  Columbia  in  Canada  and  34  in  the  USA  (Connec=cut,  Michigan,  Montana,  Oregon,  Texas,  Virginia,  Wyoming).  

3.  Are  there  only  a  few  fungal  genera  capable  of  forming  resistant  spore  banks?  Yes,  a  few  genera  dominate  EMF  spore  banks.      Some  genera  reflect  previous  knowledge  (Rhizopogon,  Wilcoxina,  Cenococcum,  Tomentella)  but  some  (Laccaria,  Suillus,  Tuber)  were  not  known  to  be  major  players  in  spore  banks.      

AK

MN

NC#

MS#FL CA

PR YO

PR  =  Point  Reyes  Na0onal  Seashore;  YO  =  Yosemite  Na0onal  Park  ;    CA  =  Stanislaus  Na0onal  Forest;  AK  =  Alaska;  MN  =  Minnesota;  MS  =  Mississippi;  NC  =  North  Carolina;  FL  =  Florida  

Sampled  from  19  plots  x  13  samples  per  plot  (+  aerial  control)  x  2  tree  hosts  (common  and  na0ve)  x  3-­‐5  reps  per  tree  =  1,806  seedlings  

●●

●●

Pb Pc Pg Pm Pmo Pp Pt

02

46

810

12

EMF

richn

ess

aca

a

bc

ab

b

b

Figure  2  In  all  cases,  the  common  host  Pm  recovered  ≥  EMF  OTUs  than  the  na0ve  tree  host.  There  is  no  significant  main  effect  of  tree  host  on  alpha  diversity,  but  there  is  a  significant  tree  by  host  interac0on  due  to  differences  in  EMF  richness  across  the  con0nent.  For  beta  diversity,  with  the  excep0on  of  Pb  in  Minnesota,  Pm  did  not  recover  significantly  different  EMF  communi0es  than  na0ve  host  plant.  Pb  =  Pinus  banksiana;  Pc  =  Pinus  contorta;  Pg  =  Picea  glauca;  Pm=  Pinus  muricata;  Pmo=  Pinus  mon=cola;  Pp  =  Pinus  ponderosa;  Pt  =  Pinus  taeda.  

 2.  Does  bioassay  plant  host  affect  diversity  of  EMF  taxa?    No.  In  general,  Pinus  muricata,  is  an  effec=ve  bioassay  host  and  recovered  similar  EMF  communi=es  as  na=ve  hosts.  

Where  did  we  sample?  

● ●

●●

−0.5 0.0 0.5

−0.6

−0.4

−0.2

0.0

0.2

0.4

0.6

PC1

PC2

Boreal

Southeastern

Western

● ●

●●

●Adonis R2 = 0.5p = 0.001

AKCAFLMNMSNC

A  

−0.0

20.

000.

020.

040.

06

Distance (km)

Man

tel C

orre

latio

n

0.001 0.01 0.1 1 50 1000 5000

B  

Distance  (Km)  

Mantel  correla0o

n  

1"

Rhizopogon)arctostaphyli,"""R.)rubescens)gr.,""R.)salebrosus)

CA

Most Frequent EMF Spore Bank Taxa Across the N. America

Wilcoxina))mikolae,))Rhizopogon)fuscorubens,))R.)rubescens)gr.,)

YO

Sphaerosporella""sp,"Wilcoxina)sp,""Piloderma"sp"

AK Laccaria"sp,""Suillus)brevipes,"Rhizopogon)rubescens)gr."

MN

Rhizopogon)occidentalis,"""R.)salebrosus,""R.)fuscorubens)

PR

Rhizopogon)rubescens)gr.,"Cenococcum)sp,""R.)fuscorubens))

MS

Rhizopogon)rubescens)gr.,""Tuber"sp1,""Tuber)sp2"

NC

Rhizopogon)fuscorubescens,""Cenococcum)sp,"Thelephora"sp"

FL

Common  host  

4.  Will  EMF  taxa  in  spore  banks  will  be  rare  or  absent  from  fresh  soil  EMF  communi0es  from  the  exact  same  sampling  loca0on?  Yes,  there  was  minimal  overlap  between  soil  and  spore  bank  EMF.  

AK CA FL

MN MS NC

Soil%v%Spore%Bank%EMF%Venn%Diagrams%Soil

Spore bank

Figure  4  In  all  loca0ons,  over  half  the  EMF  OTUs  recovered  from  the  spore  bank  are  never  recovered  from  the  fresh  soil.  Furthermore,  there  is  liSle  community  overlap  between  EMF  sequenced  from  fresh  soils  versus  those  in  spore  banks,  indica0ng  that  similar  to  plants,  those  EMF  that  will  dominate  post  disturbance  will  unlikely  be  the  same  as  the  major  players  in  older  forests.      

Recommended