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Front MatterSource: Proceedings of the National Academy of Sciences of the United States of America,Vol. 94, No. 18 (Sep. 2, 1997), pp. i-ixPublished by: National Academy of SciencesStable URL: http://www.jstor.org/stable/43053 .
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PROCEEDINGS
OF THE
NATIONAL ACADEMY OF SCIENCES
OF THE UNITED STATES OF AMERICA
September 2, 1997
Volume 94/ Nuwmber 18
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Cell Cycle Cdkl-7 p15 Cyclin A p16 Cyclin B p19 Cyclin D p21 Cyclin E p27 Cyclin H p57 V-Cyclin
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PROCEEDINGS OF THE
NATIONAL ACADEMY OF SCIENCES
OF THE UNITED STATES OF AMERICA
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PROCEEDINGS
OF THE
NATIONAL ACADEMY OF SCIENCES
OF THE UNITED STATES OF AMERICA
September 2, 1997 Volume 94, Number 18 pp. 9513-10006
Table of Contents
Commentaries
All change at Holliday junction 9513-9515 David M. J. Lilley
Evolution of the Brassica self-incompatibility locus: 9516-9519 A look into S-locus gene polymorphisms
June B. Nasrallah
Neurodegenerative diseases and transglutaminase 10006 (Correction)
Laszlo Lorand
Inaugural Article
Interleaved concatenated codes: New perspectives on 9525-9531 approaching the Shannon limit
A. J. Viterbi, A. M. Viterbi, and N. T. Sindhushayana
Physical Sciences
CHEMISTRY
Linking topography of its potential surface with the 9520-9524 dynamics of folding of a protein model
R. Stephen Berry, Nuran Elmaci, John P. Rose, and Benjamin Vekhter
ENGINEERING
Interleaved concatenated codes: New perspectives on 9525-9531 approaching the Shannon limit
A. J. Viterbi, A. M. Viterbi, and N. T. Sindhushayana
GEOLOGY
Buoyancy-driven, rapid exhumation of 9532-9537 ultrahigh-pressure metamorphosed continental crust
W. G. Ernst, S. Maruyama, and S. Wallis
Biological Sciences
BIOCHEMISTRY
Multiple pathways to bypass the enhancer requirement 9538-9543 of sigma 54 RNA polymerase: Roles for DNA and protein determinants
Jonathan T. Wang, Adeela Syed, and Jay D. Gralla
Heterogeneous nuclear ribonucleoprotein Al binds to 9544-9549 the transcription-regulatory region of mouse hepatitis virus RNA
Hsin-Pai Li, Xuming Zhang, Roger Duncan, Lucio Comai, and Michael M. C. Lai
III
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Contents
Substrate-induced conformational change in a trimeric 9550-9555 ornithine transcarbamoylase
Ya Ha, Mark T. McCann, Mendel Tuchman, and Norma M. Allewell
Localization of the C terminus of the assembly 9556-9561 domain of hepatitis B virus capsid protein: Implications for morphogenesis and organization of encapsidated RNA
A. Zlotnick, N. Cheng, S. J. Stahl, J. F. Conway, A. C. Steven, and P. T. Wingfield
Neuregulin-3 (NRG3): A novel neural tissue-enriched 9562-9567 protein that binds and activates ErbB4
Dongxiao Zhang, Mark X. Sliwkowski, Melanie Mark, Gretchen Frantz, Robert Akita, Yang Sun, Kenneth Hillan, Craig Crowley, Jennifer Brush, and Paul J. Godowski
DNA bending and the initiation of transcription 9568-9572 at o54-dependent bacterial promoters
Manuel Carmona, Felix Claverie-Martin, and Boris Magasanik
Phylogeny of mRNA capping enzymes 9573-9578 Shuang Ping Wang, Liang Deng, C. Kiong Ho, and Stewart Shuman
An intercalation inhibitor altering the target 9579-9584 selectivity of DNA damaging agents: Synthesis of site-specific aflatoxin B1 adducts in a p53 mutational hotspot
William R. Kobertz, David Wang, Gerald N. Wogan, and John M. Essigmann
The yeast peptide-methionine sulfoxide reductase 9585-9589 functions as an antioxidant in vivo
Jackob Moskovitz, Barbara S. Berlett, J. Michael Poston, and Earl R. Stadtman
On the reaction mechanism of L-lactate oxidase: 9590-9595 Quantitative structure-activity analysis of the reaction with para-substituted L-mandelates
Kazuko Yorita, Karl Janko, Kenji Aki, Sandro Ghisla, Bruce A. Palfey, and Vincent Massey
Fe-catalyzed cleavage of the a subunit of 9596-9601 Na/K-ATPase: Evidence for conformation-sensitive interactions between cytoplasmic domains
Rivka Goldshleger and Steven J. D. Karlish
Identification of an intramolecular interaction 9602-9607 between small regions in type V adenylyl cyclase that influences stimulation of enzyme activity by G,,
Klaus Scholich, Claus Wittpoth, Ann J. Barbier, Jason B. Mullenix, and Tarun B. Patel
Pyruvate ferredoxin oxidoreductase from the 9608-9613 hyperthermophilic archaeon, Pyrococcus furiosus, functions as a CoA-dependent pyruvate decarboxylase
Kesen Ma, Andrea Hutchins, Shi-Jean S. Sung, and Michael W. W. Adams
Dominant transformation by mutated human ras 9614-9619 genes in vitro requires more than 100 times higher expression than is observed in cancers
Vivian Y. Hua, Wai K. Wang, and Peter H. Duesberg
BIOPHYSICS
Linking topography of its potential surface with the 9520-9524 dynamics of folding of a protein model
R. Stephen Berry, Nuran Elmaci, John P. Rose, and Benjamin Vekhter
Crystal structures of the copper and nickel complexes 9620-9625 of RNase A: Metal-induced interprotein interactions and identification of a novel copper binding motif
R. Balakrishnan, N. Ramasubbu, K. I. Varughese, and R. Parthasarathy
A molecular level picture of the stabilization of 9626-9630 A-DNA in mixed ethanol-water solutions
Thomas E. Cheatham, III, Michael F. Crowley, Thomas Fox, and Peter A. Kollman
Probes bound to myosin Cys-707 rotate during length 9631-9636 transients in contraction
Thomas P. Burghardt, Susanna P. Garamszegi, and Katalin Ajtai
The 2.0-A resolution crystal structure of a trimeric 9637-9642 antibody fragment with noncognate VH-VL domain pairs shows a rearrangement of VH CDR3
Xue Y. Pei, Philipp Holliger, Alexey G. Murzin, and Roger L. Williams
Independent mobility of catalytic and regulatory 9643-9647 domains of myosin heads
Bishow Adhikari, Kalman Hideg, and Piotr G. Fajer
CELL BIOLOGY
Wild-type p53 triggers a rapid senescence program in 9648-9653 human tumor cells lacking functional p53
Mary M. Sugrue, Deug Y. Shin, Sam W. Lee, and Stuart A. Aaronson
Identification and classification of 16 new kinesin 9654-9659 superfamily (KIF) proteins in mouse genome
Terunaga Nakagawa, Yosuke Tanaka, Eiji Matsuoka, Satoru Kondo, Yasushi Okada, Yasuko Noda, Yoshimitsu Kanai, and Nobutaka Hirokawa
Phosphorylation of insulin receptor substrate 1 by 9660-9664 glycogen synthase kinase 3 impairs insulin action
Hagit Eldar-Finkelman and Edwin G. Krebs
Histone underacetylation is an ancient component of 9665-9668 mammalian X chromosome inactivation
Matthew J. Wakefield, Ann M. Keohane, Bryan M. Turner, and Jennifer A. Marshall Graves
Late memory-related genes in the hippocampus 9669-9673 revealed by RNA fingerprinting
Sebastiano Cavallaro, Noam Meiri, Chu-Li Yi, Simone Musco, Wu Ma, Jesse Goldberg, and Daniel L. Alkon
Centrosome positioning and directionality 9674-9678 of cell movements
Masahiro Ueda, Ralph Graif, Harry K. MacWilliams, Manfred Schliwa, and Ursula Euteneuer
v
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Contents
p53-independent apoptosis induced by paclitaxel 9679-9683 through an indirect mechanism
Jennifer S. Lanni, Scott W. Lowe, Edward J. Licitra, Jun 0. Liu, and Tyler Jacks
Dictyostelium myosin II null mutant can still cap Con 9684-9686 A receptors
Carmen Aguado-Velasco and Mark S. Bretscher
Activation of the c-Jun N-terminal kinase pathway by 9687-9692 a novel protein kinase related to human germinal center kinase
Katrina Diener, Xuhong Sunny Wang, Cecil Chen, Christian F. Meyer, George Keesler, Mark Zukowski, Tse-Hua Tan, and Zhengbin Yao
Rerlp as common machinery for the endoplasmic 9693-9698 reticulum localization of membrane proteins
Ken Sato, Miyuki Sato, and Akihiko Nakano
RanGTP-mediated nuclear export of karyopherin a 9699-9704 involves its interaction with the nucleoporin Nupl53
Junona Moroianu, Gunter Blobel, and Aurelian Radu
Compromised mitochondrial function leads to 9705-9710 increased cytosolic calcium and to activation of MAP kinases
Yuan Luo, Joshua D. Bond, and Vernon M. Ingram
The newt ribozyme is part of a riboprotein complex 9711-9716 Ettore Luzi, Fritz Eckstein, and Giuseppina Barsacchi
cAMP-mediated inhibition of the epithelial brush 10006 border NA+/H+ exchanger, NHE3, requires an associated regulatory protein (Correction)
C. H. Chris Yun, Soohyuk Oh, Mizra Zizak, Deborah Steplock, Su Tsao, Chung-Ming Tse, Edward J. Weinman, and Mark Donowitz
DEVELOPMENTAL BIOLOGY
Transcriptional regulation of the Xlim-1 gene by 9717-9722 activin is mediated by an element in intron I
Martha L. Rebbert and Igor B. Dawid
ECOLOGY
Firefly "femmes fatales" acquire defensive steroids 9723-9728 (lucibufagins) from their firefly prey
Thomas Eisner, Michael A. Goetz, David E. Hill, Scott R. Smedley, and Jerrold Meinwald
Reorganization of an arid ecosystem in response to 9729-9733 recent climate change
James H. Brown, Thomas J. Valone, and Charles G. Curtin
EVOLUTION
Sex-specific quantitative trait loci affecting longevity 9734-9739 in Drosophila melanogaster
Sergey V. Nuzhdin, Elena G. Pasyukova, Christy L. Dilda, Zhao-Bang Zeng, and Trudy F. C. Mackay
Character displacement in some Cnemidophorus 9740-9745 lizards revisited: A phylogenetic analysis
Ray. R. Radtkey, Sylvia M. Fallon, and Ted J. Case
A screen for fast evolving genes from Drosophila 9746-9750 Karl J. Schmid and Diethard Tautz
Operons and SL2 trans-splicing exist in nematodes 9751-9756 outside the genus Caenorhabditis
Donald Evans, Diego Zorio, Margaret MacMorris, Carlos E. Winter, Kristi Lea, and Thomas Blumenthal
GENETICS
Dual roles for DNA sequence identity and the 9757-9762 mismatch repair system in the regulation of mitotic crossing-over in yeast
Abhijit Datta, Miyono Hendrix, Marc Lipsitch, and Sue Jinks-Robertson
Molecular keys to speciation: DNA polymorphism and 9763-9767 the control of genetic exchange in enterobacteria
Marin Vuli6, Francisco Dionisio, Frangois Taddei, and Miroslav Radman
Changes of telomere length cause reciprocal changes 9768-9772 in the lifespan of mother cells in Saccharomyces cerevisiae
Nicanor R. Austriaco, Jr. and Leonard P. Guarente
The protein product of the het-s heterokaryon 9773-9778 incompatibility gene of the fungus Podospora anserina behaves as a prion analog
Virginie Coustou, Carol Deleu, Sven Saupe, and Joel Begueret
Neuronal death in the central nervous system 9779-9781 demonstrates a non-fibrin substrate for plasmin
Stella E. Tsirka, Thomas H. Bugge, Jay L. Degen, and Sidney Strickland
smg mutants affect the expression of alternatively 9782-9785 spliced SR protein mRNAs in Caenorhabditis elegans
Mike Morrison, Kevin S. Harris, and Mark B. Roth
Barriers to recombination between closely related 9786-9791 bacteria: MutS and RecBCD inhibit recombination between Salmonella typhimurium and Salmonella typhi
Thomas C. Zahrt and Stanley Maloy
IMMUNOLOGY
Tumor necrosis factor (TNF)-mediated kinase 9792-9796 cascades: Bifurcation of Nuclear Factor-KB and c-jun N-terminal kinase (JNK/SAPK) pathways at TNF receptor-associated factor 2
Ho Yeong Song, Catherine H. Regnier, Carsten J. Kirschning, David V. Goeddel, and Mike Rothe
The Syk and ZAP-70 SH2-containing tyrosine kinases 9797-9801 are implicated in pre-T cell receptor signaling
Alec M. Cheng, Izumi Negishi, Steven J. Anderson, Andrew C. Chan, Joseph Bolen, Dennis Y. Loh, and Tony Pawson
Frequency of HLA allele-specific peptide motifs in 9802-9807 HIV-1 proteins correlates with the allele's association with relative rates of disease progression after HIV-1 infection
George W. Nelson, Richard Kaslow, and Dean L. Mann
vi
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Contents
Expression of adenoviral E3 transgenes in j3 cells 9808-9813 prevents autoimmune diabetes
Matthias G. von Herrath, Shimon Efrat, Michael B. A. Oldstone, and Marshall S. Horwitz
Tumor necrosis factor a plays a central role in 9814-9819 immune-mediated clearance of adenoviral vectors
Keith B. Elkon, Chau-Ching Liu, Jason G. Gall, Jose Trevejo, Michael W. Marino, Karil A. Abrahamsen, Xin Song, Jun-Liang Zhou, Lloyd J. Old, Ronald G. Crystal, and Erik Falck-Pedersen
MEDICAL SCIENCES
Delayed loss of cholesterol from a localized 9820-9824 lipoprotein depot in apolipoprotein A-I-deficient mice
Olga Stein, Yedida Dabach, Gideon Hollander, Mazal Ben-Naim, Gideon Halperin, Jan L. Breslow, and Yechezkiel Stein
HIV-1 infection of nondividing cells through the 9825-9830 recognition of integrase by the importin/ karyopherin pathway
Philippe Gallay, Thomas Hope, Daniel Chin, and Didier Trono
Targeted ablation of the vitamin D receptor: An 9831-9835 animal model of vitamin D-dependent rickets type II with alopecia
Yan Chun Li, Alison E. Pirro, Michael Amling, Gunter Delling, Roland Baron, Roderick Bronson, and Marie B. Demay
Expansion in vitro of transplantable human cord blood 9836-9841 stem cells demonstrated using a quantitative assay of their lympho-myeloid repopulating activity in nonobese diabetic-scid/scid mice
E. Conneally, J. Cashman, A. Petzer, and C. Eaves
The CXC chemokine stromal cell-derived factor 1 is 9842-9847 not responsible for CD8+ T cell suppression of syncytia-inducing strains of HIV-1
Simon F. Lacey, Charlene B. McDanal, Richard Horuk, and Michael L. Greenberg
Evidence for rapid disappearance of initially expanded 9848-9853 HIV-specific CD8+ T cell clones during primary HIV infection
Giuseppe Pantaleo, Hugo Soudeyns, James F. Demarest, Mauro Vaccarezza, Cecilia Graziosi, Stefania Paolucci, MaryBeth Daucher, Oren J. Cohen, Frangois Denis, William E. Biddison, Rafick P. Sekaly, and Anthony S. Fauci
Biochemical changes in the frontal lobe of 9854-9859 HIV-infected individuals detected by magnetic resonance spectroscopy
Dolores L6pez-Villegas, Robert E. Lenkinski, and Ian Frank
A novel virus in swine is closely related to the human 9860-9865 hepatitis E virus
Xiang-Jin Meng, Robert H. Purcell, Patrick G. Halbur, James R. Lehman, Dale M. Webb, Tatiana S. Tsareva, Joseph S. Haynes, Brad J. Thacker, and Suzanne U. Emerson
Iron accumulation in Alzheimer disease is a source of 9866-9868 redox-generated free radicals
Mark A. Smith, Peggy L. R. Harris, Lawrence M. Sayre, and George Perry
MICROBIOLOGY
Restricted structural gene polymorphism in the 9869-9874 Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination
Srinand Sreevatsan, Xi Pan, Kathryn E. Stockbauer, Nancy D. Connell, Barry N. Kreiswirth, Thomas S. Whittam, and James M. Musser
Functional characterization of the C-C 9875-9880 chemokine-like molecules encoded by molluscum contagiosum virus types 1 and 2
Mitchell D. Krathwohl, Robert Hromas, Darron R. Brown, Hal E. Broxmeyer, and Kenneth H. Fife
Complementation of sporulation and motility defects 9881-9886 in a prokaryote by a eukaryotic GTPase
Patricia L. Hartzell
A secreted Salmonella protein with homology to an 9887-9892 avirulence determinant of plant pathogenic bacteria
Wolf-Dietrich Hardt and Jorge E. Galan
NEUROBIOLOGY
Peropsin, a novel visual pigment-like protein located 9893-9898 in the apical microvilli of the retinal pigment epithelium
Hui Sun, Debra J. Gilbert, Neal G. Copeland, Nancy A. Jenkins, and Jeremy Nathans
Autoradiographic characterization of 9899-9904 [3H]-5-HT-moduline binding sites in rodent brain and their relationship to 5-HT1B receptors
Isabelle Cloez-Tayarani, Ana Cardona, Jean-Claude Rousselle, Olivier Massot, Lena Edelman, and Gilles Fillion
Similarities in normal and binocularly 9905-9908 rivalrous viewing
Timothy J. Andrews and Dale Purves
A signaling organelle containing the nerve growth 9909-9914 factor-activated receptor tyrosine kinase, TrkA
Mark L. Grimes, Eric Beattie, and William C. Mobley
Neuronal nicotinic threonine-for-leucine 247 U7 9915-9919 mutant receptors show different gating kinetics when activated by acetylcholine or by the noncompetitive agonist 5-hydroxytryptamine
E. Palma, L. Maggi, F. Eusebi, and R. Miledi
Inactivation of the survival motor neuron gene, a 9920-9925 candidate gene for human spinal muscular atrophy, leads to massive cell death in early mouse embryos
Bertold Schrank, Rudolf Gotz, Jennifer M. Gunnersen, Janice M. Ure, Klaus V. Toyka, Austin G. Smith, and Michael Sendtner
Cell surface expression of the Alzheimer 9926-9931 disease-related presenilin proteins
Nazneen N. Dewji and S. J. Singer
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Contents
Modulation of potassium channel function by 9932-9937 methionine oxidation and reduction
Matthew A. Ciorba, Stefan H. Heinemann, Herbert Weissbach, Nathan Brot, and Toshinori Hoshi
VMAT2 knockout mice: Heterozygotes display 9938-9943 reduced amphetamine-conditioned reward, enhanced amphetamine locomotion, and enhanced MPTP toxicity
Nobuyuki Takahashi, Lucinda L. Miner, Ichiro Sora, Hiroshi Ujike, Randal S. Revay, Vladimir Kostic, Vernice Jackson-Lewis, Serge Przedborski, and George R. Uhl
A model of ocular dominance column development by 9944-9949 competition for trophic factor
Anthony E. Harris, G. Bard Ermentrout, and Steven L. Small
Substitution of a mutant a2a-adrenergic receptor via 9950-9955 "hit and run" gene targeting reveals the role of this subtype in sedative, analgesic, and anesthetic-sparing responses in vivo
Parul P. Lakhlani, Leigh B. MacMillan, Tian Zhi Guo, Brian A. McCool, David M. Lovinger, Mervyn Maze, and Lee E. Limbird
Spinophilin, a novel protein phosphatase 1 binding 9956-9961 protein localized to dendritic spines
Patrick B. Allen, Charles C. Ouimet, and Paul Greengard
PHYSIOLOGY
Loss of protein kinase C inhibition in the f3-T594M 9962-9966 variant of the amiloride-sensitive Na+ channel
Yong Cui, Yan Ru Su, Mark Rutkowski, Max Reif, Anil G. Menon, and R. Y. K. Pun
Lipoxin A4 stable analogs inhibit leukocyte rolling and 9967-9972 adherence in the rat mesenteric microvasculature: Role of P-selectin
Rosario Scalia, Jonathan Gefen, Nicos A. Petasis, Charles N. Serhan, and Allan M. Lefer
PLANT BIOLOGY
F-actin and G-actin binding are uncoupled by 9973-9978 mutation of conserved tyrosine residues in maize actin depolymerizing factor (ZmADF)
Chang-Jie Jiang, Alan G. Weeds, Safina Khan, and Patrick J. Hussey
Expression of an ortholog of replication protein Al 9979-9983 (RPA1) is induced by gibberellin in deepwater rice
Esther van der Knaap, Sandrine Jagoueix, and Hans Kende
The gene for albicidin detoxification from Pantoea 9984-9989 dispersa encodes an esterase and attenuates pathogenicity of Xanthomonas albilineans to sugarcane
Lianhui Zhang and Robert G. Birch
Wheat cytosolic acetyl-CoA carboxylase complements 9990-9995 an ACCI null mutation in yeast
M. Joachimiak, G. Tevzadze, J. Podkowinski, R. Haselkorn, and P. Gornicki
POPULATION BIOLOGY
Chloroplast DNA footprints of postglacial 9996-10001 recolonization by oaks
Remy J. Petit, Emmanuel Pineau, Brigitte Demesure, Roberto Bacilieri, Alexis Ducousso, and Antoine Kremer
Social Sciences
ECONOMIC SCIENCES
Analysis of linear trade models and relation 10002-10005 to scale economies
Ralph E. Gomory and William J. Baumol
AUTHOR INDEX xi-xii
INFORMATION FOR AUTHORS xiii-xiv
SIZING WORKSHEET xv
COPYRIGHT ASSIGNMENT FORM xvii
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